| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859286
Identifier: 85859286
GI number: 85859286
Start: 1471749
End: 1472126
Strand: Direct
Name: 85859286
Synonym: SYN_02168
Alternate gene names: NA
Gene position: 1471749-1472126 (Clockwise)
Preceding gene: 85859284
Following gene: 85859287
Centisome position: 46.29
GC content: 46.56
Gene sequence:
>378_bases ATGTCAGAATATGACATACCCTCTTTATATTTAAGATCCAGATATTTCTTTCATAATCAACTAAAACACCTGCCAATTAT TGCTTGTACAGAATGCCCCGGCGGGCCTGTTCAAGCGGCATTGGAGGATCGGACAGCGAAACGGCAGGCCACTGTATTGC CGCATCCACGGAAGAACGGGCTTGGTCGGAACAGGATTTCCAAGCTGCCGGTTATTCTCAGTGAAGCCGCCGGCGCAACC GGATTGCAGACGATCCATGTTTCGCTGGAAATAAGAAGATTAAATGAAGCGGCAAATTCCCTTCCGGTCAATATCATCCT CAGAACGGAATATCTAAAGTTCCGCGATTACCTTATCAGGCTAAAACAAACGGTGTAA
Upstream 100 bases:
>100_bases GGCGGCATAGCCAAGTGGTAAGGCAGCGGTCTGCAAAACCGTTATACTCCGGTTCAAATCCGGATGCCGCCTCCATTTTA TAGGAACATATAAAGAGGGT
Downstream 100 bases:
>100_bases GCGTTCATTTGTGACTGAGGTGCGACACAGGCATTTTCAGCAAGTCAAAATAAACAATATCAACAAAAATCCCACATGTT ACACGCATGGAATATCTTTC
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MSEYDIPSLYLRSRYFFHNQLKHLPIIACTECPGGPVQAALEDRTAKRQATVLPHPRKNGLGRNRISKLPVILSEAAGAT GLQTIHVSLEIRRLNEAANSLPVNIILRTEYLKFRDYLIRLKQTV
Sequences:
>Translated_125_residues MSEYDIPSLYLRSRYFFHNQLKHLPIIACTECPGGPVQAALEDRTAKRQATVLPHPRKNGLGRNRISKLPVILSEAAGAT GLQTIHVSLEIRRLNEAANSLPVNIILRTEYLKFRDYLIRLKQTV >Mature_124_residues SEYDIPSLYLRSRYFFHNQLKHLPIIACTECPGGPVQAALEDRTAKRQATVLPHPRKNGLGRNRISKLPVILSEAAGATG LQTIHVSLEIRRLNEAANSLPVNIILRTEYLKFRDYLIRLKQTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14177; Mature: 14046
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEYDIPSLYLRSRYFFHNQLKHLPIIACTECPGGPVQAALEDRTAKRQATVLPHPRKNG CCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC LGRNRISKLPVILSEAAGATGLQTIHVSLEIRRLNEAANSLPVNIILRTEYLKFRDYLIR CCCCHHHHCCEEEECCCCCCCEEEEEEEEEEEHHHHHHCCCCEEEEEECHHHHHHHHHHH LKQTV HHHCC >Mature Secondary Structure SEYDIPSLYLRSRYFFHNQLKHLPIIACTECPGGPVQAALEDRTAKRQATVLPHPRKNG CCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC LGRNRISKLPVILSEAAGATGLQTIHVSLEIRRLNEAANSLPVNIILRTEYLKFRDYLIR CCCCHHHHCCEEEECCCCCCCEEEEEEEEEEEHHHHHHCCCCEEEEEECHHHHHHHHHHH LKQTV HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA