| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is tal [H]
Identifier: 85859283
GI number: 85859283
Start: 1468923
End: 1469048
Strand: Direct
Name: tal [H]
Synonym: SYN_03220
Alternate gene names: 85859283
Gene position: 1468923-1469048 (Clockwise)
Preceding gene: 85859282
Following gene: 85859284
Centisome position: 46.2
GC content: 42.86
Gene sequence:
>126_bases ATGGGCGCGGATATAGCTACAATTCCATTCAAGGTTATCGAACAGCTTGCAAAACATCCCCTGACCGATAAAGGCATCGA TCTGTTTCTGGCTGACTGGGAAAAAGTTCCTAAACTCAAAAAATGA
Upstream 100 bases:
>100_bases TTGTAGAGCAGATTATTACTATTTATGATCATTATGGTTTTGACACGGAAATCATAGTCGCCAGCGTCCGCCATCCCGTC ATGTTCTGGAAGGTGCGCTC
Downstream 100 bases:
>100_bases CTTTGCTTATGTGTTCCAGATTTGCTGTGATCTGAAACCTTCAGAAAATTATGAAACGACATCCACTGGTATCCGCCGGC GAAAAAATCTATAACCTGCC
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 41; Mature: 40
Protein sequence:
>41_residues MGADIATIPFKVIEQLAKHPLTDKGIDLFLADWEKVPKLKK
Sequences:
>Translated_41_residues MGADIATIPFKVIEQLAKHPLTDKGIDLFLADWEKVPKLKK >Mature_40_residues GADIATIPFKVIEQLAKHPLTDKGIDLFLADWEKVPKLKK
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 3B subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004731 - InterPro: IPR022999 - InterPro: IPR018225 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: =2.2.1.2 [H]
Molecular weight: Translated: 4620; Mature: 4488
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGADIATIPFKVIEQLAKHPLTDKGIDLFLADWEKVPKLKK CCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCHHCCCCCCC >Mature Secondary Structure GADIATIPFKVIEQLAKHPLTDKGIDLFLADWEKVPKLKK CCCCCCCCHHHHHHHHHCCCCCCCCEEEECCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA