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The map label for this gene is 85859250

Identifier: 85859250

GI number: 85859250

Start: 1431758

End: 1434022

Strand: Direct

Name: 85859250

Synonym: SYN_00274

Alternate gene names: NA

Gene position: 1431758-1434022 (Clockwise)

Preceding gene: 85859249

Following gene: 85859251

Centisome position: 45.03

GC content: 53.42

Gene sequence:

>2265_bases
ATGAGCCGTTACAGGATCAAAAGGGGCATCGCTCCGATTGCCGACGGGAATTCCCGATGGTTCATCCTGGATGAAACCGG
GCCTAAAAAAATTATCTCTGGACTGGCGTTGGAGGTCATTCGGTTGATCGCCAGCGATCTCGGCAACGAGGACAATCTGG
CCGAAGCATTAGCGAATCGGTTCCCCCCAGAAAAGGTTTATTATGTCTTGATTCAACTCGAAAAGCAGGGTGTGATCGTC
AAGGATTCAGTGCAGACTGAAACGCCGGCGGATTTGTTTCGATCTAAGGCGTATGGACAGGAAAGGACAGGATATCCGCC
TTCCAGGAACGATGACTTGACTGTAAAAATATTTGCCATCGGCGAAGCGGAGACGTCTGCGGATGCCATCGCGTCATCGC
TGTCTCGTTCCGATGTGGTGCGGATCGAACGCGTCCGGGATTGGCGCACTGAAAGGAGGTCTGCCGATACGGTTCACGTG
GCCGTCACACCTGATTATCTCGAGCCGGAGCTGGCTGCCTTCGGACGTTTCGCCCAAAAGCTCAGACTCCGCTGGATGCC
TGTAAAGCCCTGTGGGGTGATTCCGTGGCTCGGACCATTTCTTACGGAAGAAACAGGCTGCCTGGCTTGCCTGCTTGACC
GGGTAATGGGACATCGGAGGCTGGAAGCGGATCAGATCCTTCAAAGTGGGAATAAAAAGTCTTTGCGCCTTTCCATAGGG
CAGACAATTCATTCTTTGGAAACGGTTACCGGATTGCTGGCAGTGGAACTGGAAAAACTGGCCATGGGAGGTTCGTCGGA
AATGACAGGTGTCATGGTCACCCTTGACTTCCAGACACTGCGGATGGAGCGTCATCTGCTTGCGAAACGTCCTCAATGTG
CGGTGTGCGGGACCATCTCACAAAAAAACATCCGGCTTGAAACCCTTCCGAAGGAACCATTTTGCCTGGAATCACGAATA
AAAGTGGATTATCGTGATGGCGGTGAGCGGGTCTGCTCAGCAGTGGAAACACTTGATAAATATGCCCACCTGATCAGCCC
GGTCACAGGTGTGGTGGGACGGTTGATGCTGCTGGATGATATTCCTTCATGCTTCGGCTCGGTGATTCGCAGCGAATGGA
ACGTCCGGAACCGGGGAGAAGCGTTGCTTTACGAACAGAAGTCGCGCCTGTCGGCTACTGGTTTCAGTCTGGGAAAAGGC
CGGAGCGAGCTGCAGGCGCGGGCCAGCGCTCTGGGTGAGGCCATTGAACGCTACTGTTCACAATACGAGGGTTATGAGAC
TCATATTCGGGCATCCTTTACGGAACTGGGTGATGTGGCGATTGCCCCTCACCATTTAATGGGTTTCAGTGAACAGCAAT
ACAGGGACCGCGAAGCCTGGCGCAAAAAGGGGGGGACCACTCACGTTCCTGACCCTTATGATTTCGATCGTCCGATTGAC
TGGATGCCGGCCTGGTCGCTTACACAGAAGCGTTGGCGGCTGATTCCCAGTGCCTTTGTTTATTATTCCTATCCGCGGGA
AAGGGGGGGAGACATCTGTCGCGGTTGCAGCAATGGTGTAGCAGCGGGGAACTGTTTAGAAGAGGCCGTCATGCAGGGCT
TTTTTGAACTGGTTGAGCGCGATGCAACGGCGATGTGGTGGTATCATCGACTGCGGAAGCCAGCCGTGGATTGGCGCAGT
TTAGATTCGACTTTTACCGCCGCAGTGGATGTATCCATGAAAGAGAAGGGCATGGGGCTGGATGTGCTCGATCTGACCAA
TGACCTGGGCATCCCCGTTTTTTCCGCCAATCTGTTTGGCTCAAAGGAAGACGACTGCCTTAAAGCGATTGGATTAGGCT
GCCATTACGACCCGCATATCGCCTTGGAGAGGGCCATATCTGAATTGGGTCAATGTTGGATAATGGTGGATAGAAAGGAA
TACAGACTCAAGTTGCAGGACGCAGGCAGGGAACATTTTTTACGGGCGGACCCTCATCAGCCTCCAAGAATCTCTTCAGA
TTTCCACAGTAAACAGCGAGAGGATTTTCTTGACGACATTGAGGATGCAGTGCAGTTGCTGCGCACCAGGGGGTTGGAGA
TGCTGGTAGTGGACATGACCCGACCCGATGTTGGCTTTCCGGTAGTGAGGGTGATCGTTCCGGGACTTGTGCATTTCTGG
CCCCGTTTCGGTTGCCGCCGGCTTTTCGACGTTCCCAGAGAGGCAGGATGGATTGACGGAGACGTGGGTGAAGATGATCT
GAATCCTGTGCCGTTTTTTTTGTGA

Upstream 100 bases:

>100_bases
TTCAGCCCGTTGCGCCGGTGGCTGCCGTAAGCCTTATGGCCTGGTTCAACACGGCGACCAGTGGATTGATTATCTGGCGG
GGTTTTTATAAGGTGTCGCG

Downstream 100 bases:

>100_bases
TTTTTGTGAAATGAATGGGTTAATTTGCATGAACAAAAAACCTCGCCTTCAGAAGAGCAGCATATCATTAGCTGTGAAGC
TGCGCGATGACATCACGATG

Product: fatty acid binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 754; Mature: 753

Protein sequence:

>754_residues
MSRYRIKRGIAPIADGNSRWFILDETGPKKIISGLALEVIRLIASDLGNEDNLAEALANRFPPEKVYYVLIQLEKQGVIV
KDSVQTETPADLFRSKAYGQERTGYPPSRNDDLTVKIFAIGEAETSADAIASSLSRSDVVRIERVRDWRTERRSADTVHV
AVTPDYLEPELAAFGRFAQKLRLRWMPVKPCGVIPWLGPFLTEETGCLACLLDRVMGHRRLEADQILQSGNKKSLRLSIG
QTIHSLETVTGLLAVELEKLAMGGSSEMTGVMVTLDFQTLRMERHLLAKRPQCAVCGTISQKNIRLETLPKEPFCLESRI
KVDYRDGGERVCSAVETLDKYAHLISPVTGVVGRLMLLDDIPSCFGSVIRSEWNVRNRGEALLYEQKSRLSATGFSLGKG
RSELQARASALGEAIERYCSQYEGYETHIRASFTELGDVAIAPHHLMGFSEQQYRDREAWRKKGGTTHVPDPYDFDRPID
WMPAWSLTQKRWRLIPSAFVYYSYPRERGGDICRGCSNGVAAGNCLEEAVMQGFFELVERDATAMWWYHRLRKPAVDWRS
LDSTFTAAVDVSMKEKGMGLDVLDLTNDLGIPVFSANLFGSKEDDCLKAIGLGCHYDPHIALERAISELGQCWIMVDRKE
YRLKLQDAGREHFLRADPHQPPRISSDFHSKQREDFLDDIEDAVQLLRTRGLEMLVVDMTRPDVGFPVVRVIVPGLVHFW
PRFGCRRLFDVPREAGWIDGDVGEDDLNPVPFFL

Sequences:

>Translated_754_residues
MSRYRIKRGIAPIADGNSRWFILDETGPKKIISGLALEVIRLIASDLGNEDNLAEALANRFPPEKVYYVLIQLEKQGVIV
KDSVQTETPADLFRSKAYGQERTGYPPSRNDDLTVKIFAIGEAETSADAIASSLSRSDVVRIERVRDWRTERRSADTVHV
AVTPDYLEPELAAFGRFAQKLRLRWMPVKPCGVIPWLGPFLTEETGCLACLLDRVMGHRRLEADQILQSGNKKSLRLSIG
QTIHSLETVTGLLAVELEKLAMGGSSEMTGVMVTLDFQTLRMERHLLAKRPQCAVCGTISQKNIRLETLPKEPFCLESRI
KVDYRDGGERVCSAVETLDKYAHLISPVTGVVGRLMLLDDIPSCFGSVIRSEWNVRNRGEALLYEQKSRLSATGFSLGKG
RSELQARASALGEAIERYCSQYEGYETHIRASFTELGDVAIAPHHLMGFSEQQYRDREAWRKKGGTTHVPDPYDFDRPID
WMPAWSLTQKRWRLIPSAFVYYSYPRERGGDICRGCSNGVAAGNCLEEAVMQGFFELVERDATAMWWYHRLRKPAVDWRS
LDSTFTAAVDVSMKEKGMGLDVLDLTNDLGIPVFSANLFGSKEDDCLKAIGLGCHYDPHIALERAISELGQCWIMVDRKE
YRLKLQDAGREHFLRADPHQPPRISSDFHSKQREDFLDDIEDAVQLLRTRGLEMLVVDMTRPDVGFPVVRVIVPGLVHFW
PRFGCRRLFDVPREAGWIDGDVGEDDLNPVPFFL
>Mature_753_residues
SRYRIKRGIAPIADGNSRWFILDETGPKKIISGLALEVIRLIASDLGNEDNLAEALANRFPPEKVYYVLIQLEKQGVIVK
DSVQTETPADLFRSKAYGQERTGYPPSRNDDLTVKIFAIGEAETSADAIASSLSRSDVVRIERVRDWRTERRSADTVHVA
VTPDYLEPELAAFGRFAQKLRLRWMPVKPCGVIPWLGPFLTEETGCLACLLDRVMGHRRLEADQILQSGNKKSLRLSIGQ
TIHSLETVTGLLAVELEKLAMGGSSEMTGVMVTLDFQTLRMERHLLAKRPQCAVCGTISQKNIRLETLPKEPFCLESRIK
VDYRDGGERVCSAVETLDKYAHLISPVTGVVGRLMLLDDIPSCFGSVIRSEWNVRNRGEALLYEQKSRLSATGFSLGKGR
SELQARASALGEAIERYCSQYEGYETHIRASFTELGDVAIAPHHLMGFSEQQYRDREAWRKKGGTTHVPDPYDFDRPIDW
MPAWSLTQKRWRLIPSAFVYYSYPRERGGDICRGCSNGVAAGNCLEEAVMQGFFELVERDATAMWWYHRLRKPAVDWRSL
DSTFTAAVDVSMKEKGMGLDVLDLTNDLGIPVFSANLFGSKEDDCLKAIGLGCHYDPHIALERAISELGQCWIMVDRKEY
RLKLQDAGREHFLRADPHQPPRISSDFHSKQREDFLDDIEDAVQLLRTRGLEMLVVDMTRPDVGFPVVRVIVPGLVHFWP
RFGCRRLFDVPREAGWIDGDVGEDDLNPVPFFL

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017667
- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 85134; Mature: 85003

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRYRIKRGIAPIADGNSRWFILDETGPKKIISGLALEVIRLIASDLGNEDNLAEALANR
CCCCCHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC
FPPEKVYYVLIQLEKQGVIVKDSVQTETPADLFRSKAYGQERTGYPPSRNDDLTVKIFAI
CCCHHEEEEEEEEECCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEE
GEAETSADAIASSLSRSDVVRIERVRDWRTERRSADTVHVAVTPDYLEPELAAFGRFAQK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH
LRLRWMPVKPCGVIPWLGPFLTEETGCLACLLDRVMGHRRLEADQILQSGNKKSLRLSIG
HHHEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEHH
QTIHSLETVTGLLAVELEKLAMGGSSEMTGVMVTLDFQTLRMERHLLAKRPQCAVCGTIS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEECCCC
QKNIRLETLPKEPFCLESRIKVDYRDGGERVCSAVETLDKYAHLISPVTGVVGRLMLLDD
CCCEEEEECCCCCCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPSCFGSVIRSEWNVRNRGEALLYEQKSRLSATGFSLGKGRSELQARASALGEAIERYCS
HHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QYEGYETHIRASFTELGDVAIAPHHLMGFSEQQYRDREAWRKKGGTTHVPDPYDFDRPID
HCCCCHHHHHHHHHHHCCEEECCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
WMPAWSLTQKRWRLIPSAFVYYSYPRERGGDICRGCSNGVAAGNCLEEAVMQGFFELVER
CCCCHHHHHHHHHHCCHHHEEECCCHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
DATAMWWYHRLRKPAVDWRSLDSTFTAAVDVSMKEKGMGLDVLDLTNDLGIPVFSANLFG
CHHHHHHHHHHCCCCCCHHHCCCHHHHEEEEEHHHCCCCCCHHHCCCCCCCCEEEECCCC
SKEDDCLKAIGLGCHYDPHIALERAISELGQCWIMVDRKEYRLKLQDAGREHFLRADPHQ
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEECHHHEEEHHHCCCCCCCCCCCCC
PPRISSDFHSKQREDFLDDIEDAVQLLRTRGLEMLVVDMTRPDVGFPVVRVIVPGLVHFW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
PRFGCRRLFDVPREAGWIDGDVGEDDLNPVPFFL
HHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRYRIKRGIAPIADGNSRWFILDETGPKKIISGLALEVIRLIASDLGNEDNLAEALANR
CCCCHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC
FPPEKVYYVLIQLEKQGVIVKDSVQTETPADLFRSKAYGQERTGYPPSRNDDLTVKIFAI
CCCHHEEEEEEEEECCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEE
GEAETSADAIASSLSRSDVVRIERVRDWRTERRSADTVHVAVTPDYLEPELAAFGRFAQK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH
LRLRWMPVKPCGVIPWLGPFLTEETGCLACLLDRVMGHRRLEADQILQSGNKKSLRLSIG
HHHEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEHH
QTIHSLETVTGLLAVELEKLAMGGSSEMTGVMVTLDFQTLRMERHLLAKRPQCAVCGTIS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEECCCC
QKNIRLETLPKEPFCLESRIKVDYRDGGERVCSAVETLDKYAHLISPVTGVVGRLMLLDD
CCCEEEEECCCCCCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPSCFGSVIRSEWNVRNRGEALLYEQKSRLSATGFSLGKGRSELQARASALGEAIERYCS
HHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QYEGYETHIRASFTELGDVAIAPHHLMGFSEQQYRDREAWRKKGGTTHVPDPYDFDRPID
HCCCCHHHHHHHHHHHCCEEECCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
WMPAWSLTQKRWRLIPSAFVYYSYPRERGGDICRGCSNGVAAGNCLEEAVMQGFFELVER
CCCCHHHHHHHHHHCCHHHEEECCCHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
DATAMWWYHRLRKPAVDWRSLDSTFTAAVDVSMKEKGMGLDVLDLTNDLGIPVFSANLFG
CHHHHHHHHHHCCCCCCHHHCCCHHHHEEEEEHHHCCCCCCHHHCCCCCCCCEEEECCCC
SKEDDCLKAIGLGCHYDPHIALERAISELGQCWIMVDRKEYRLKLQDAGREHFLRADPHQ
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEECHHHEEEHHHCCCCCCCCCCCCC
PPRISSDFHSKQREDFLDDIEDAVQLLRTRGLEMLVVDMTRPDVGFPVVRVIVPGLVHFW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
PRFGCRRLFDVPREAGWIDGDVGEDDLNPVPFFL
HHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]