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The map label for this gene is fadF [H]

Identifier: 85859238

GI number: 85859238

Start: 1419753

End: 1420910

Strand: Direct

Name: fadF [H]

Synonym: SYN_03213

Alternate gene names: 85859238

Gene position: 1419753-1420910 (Clockwise)

Preceding gene: 85859237

Following gene: 85859239

Centisome position: 44.66

GC content: 58.2

Gene sequence:

>1158_bases
GTGGAGACTATAGCCCCCTTCAAGGAAATTATAGAGGAAGTTAAAGCGCACGGTGGAGACGCCTTCAAACGCTGTTTCCA
ATGCGGCTTGTGCGATGCCGTCTGTCCCTGGAACAAGGTGCGGCAGTTCAGCATGCGCAAGATCGTCCGTGAGGCCACGT
TCGGCCTGACGGACATTGAGAGTGAAGAGATGTGGCGTTGCACCACCTGCGGAAGATGTCCCCAGCAGTGTCCGCGGGAC
GTAAAACAGATCGAATCCGGGGTTGCCCTGCGCAGGATTGCCACGGAGTACGGCGTATTTCCCCATTCCGTACAGCCGAT
CAAGAGCATCAGAGGCAGCCTTGTCGGTTCAGGGAACCCGCTGAACGAGGAGCGGGGCAAGCGAGCGGACTGGGCCAGGG
GCCTGGATGTGAAGCCTTTTGCCGAGGGGATGGAGATTCTGTATTTTCCCGACTGCTATGCCTGCTATGACCCGCGGATG
AAGAAGGTCGCGGTTGCCACAGCCAGGATTCTGCAGGCGGCCGGGGTGGATTTCGGCATCCTGGGCGACAAGGAAGTCTG
CTGTGGCGAGAGCATCCGCAAGGCAGGCGATGAGGAGGTGTTCCAGCGCCTGGCGAAGGAGAACATCAAGGCCTTTATCG
ATGCGGGTGTGAAGAAGATTCTTGTTTCGTCCCCCCATTGCTACCATACCTTCAAGAACGAGTATCCCGAATTCAGGGTG
AACTTCGAGATCGTTCACATCACCCAGTACCTGGCCGAGCTCATTGGCGAGGGACGGCTCAAGCTTGATCCGGACAAGGT
GTATGAGAAGAAGGTCACCTGGCATGATCCCTGTTACCTGGGGCGGCACAACGGCATCTACGACGAGCCCCGCAATGTTC
TGCAGGCCGTACCCGGTCTGGAGTTTACGGAGCTGCCGGAACACCATGTCGCCAGTCTGTGCTGCGGCGGCGGCGGCGGT
CGGATCTGGATGGAGACGATCAAGGGAGAGCGGTTCTGCGATCTGCGGATCGATCAGGCGGTCGATGTCGGGGCGGAGGT
GCTGGTCACCGCCTGTCCGTACTGCATCACCAACTTCGAGGACAGCCGGGTCACCATGGGTCTGGATGACAGGATCGAGG
TTAAAGAGATCACGGAAGTGATTTCGGAATTGATTTAG

Upstream 100 bases:

>100_bases
CAAATATGGACTGCAGAAGATTCTGGACACTGCCACCCGAATTTCACAGAATGTTGTAACCTTTGAATCGAAATAAAAAA
AGGAAAAAGGAAGGAAACCG

Downstream 100 bases:

>100_bases
GAAATCATCACATCCGATGAGGTTGATATAAATGGAAAAAGCAAACAGTAATTTTGGAGATGTAATGGTCGTCGGCGGCG
GGATCAGCGGCATTCAAGCC

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
METIAPFKEIIEEVKAHGGDAFKRCFQCGLCDAVCPWNKVRQFSMRKIVREATFGLTDIESEEMWRCTTCGRCPQQCPRD
VKQIESGVALRRIATEYGVFPHSVQPIKSIRGSLVGSGNPLNEERGKRADWARGLDVKPFAEGMEILYFPDCYACYDPRM
KKVAVATARILQAAGVDFGILGDKEVCCGESIRKAGDEEVFQRLAKENIKAFIDAGVKKILVSSPHCYHTFKNEYPEFRV
NFEIVHITQYLAELIGEGRLKLDPDKVYEKKVTWHDPCYLGRHNGIYDEPRNVLQAVPGLEFTELPEHHVASLCCGGGGG
RIWMETIKGERFCDLRIDQAVDVGAEVLVTACPYCITNFEDSRVTMGLDDRIEVKEITEVISELI

Sequences:

>Translated_385_residues
METIAPFKEIIEEVKAHGGDAFKRCFQCGLCDAVCPWNKVRQFSMRKIVREATFGLTDIESEEMWRCTTCGRCPQQCPRD
VKQIESGVALRRIATEYGVFPHSVQPIKSIRGSLVGSGNPLNEERGKRADWARGLDVKPFAEGMEILYFPDCYACYDPRM
KKVAVATARILQAAGVDFGILGDKEVCCGESIRKAGDEEVFQRLAKENIKAFIDAGVKKILVSSPHCYHTFKNEYPEFRV
NFEIVHITQYLAELIGEGRLKLDPDKVYEKKVTWHDPCYLGRHNGIYDEPRNVLQAVPGLEFTELPEHHVASLCCGGGGG
RIWMETIKGERFCDLRIDQAVDVGAEVLVTACPYCITNFEDSRVTMGLDDRIEVKEITEVISELI
>Mature_385_residues
METIAPFKEIIEEVKAHGGDAFKRCFQCGLCDAVCPWNKVRQFSMRKIVREATFGLTDIESEEMWRCTTCGRCPQQCPRD
VKQIESGVALRRIATEYGVFPHSVQPIKSIRGSLVGSGNPLNEERGKRADWARGLDVKPFAEGMEILYFPDCYACYDPRM
KKVAVATARILQAAGVDFGILGDKEVCCGESIRKAGDEEVFQRLAKENIKAFIDAGVKKILVSSPHCYHTFKNEYPEFRV
NFEIVHITQYLAELIGEGRLKLDPDKVYEKKVTWHDPCYLGRHNGIYDEPRNVLQAVPGLEFTELPEHHVASLCCGGGGG
RIWMETIKGERFCDLRIDQAVDVGAEVLVTACPYCITNFEDSRVTMGLDDRIEVKEITEVISELI

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 43370; Mature: 43370

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METIAPFKEIIEEVKAHGGDAFKRCFQCGLCDAVCPWNKVRQFSMRKIVREATFGLTDIE
CCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
SEEMWRCTTCGRCPQQCPRDVKQIESGVALRRIATEYGVFPHSVQPIKSIRGSLVGSGNP
CHHCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
LNEERGKRADWARGLDVKPFAEGMEILYFPDCYACYDPRMKKVAVATARILQAAGVDFGI
CCHHHCCCHHHHCCCCCCHHHCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHCCCCEEC
LGDKEVCCGESIRKAGDEEVFQRLAKENIKAFIDAGVKKILVSSPHCYHTFKNEYPEFRV
CCCCCHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEE
NFEIVHITQYLAELIGEGRLKLDPDKVYEKKVTWHDPCYLGRHNGIYDEPRNVLQAVPGL
EEEEHHHHHHHHHHHCCCCEEECHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHCCCC
EFTELPEHHVASLCCGGGGGRIWMETIKGERFCDLRIDQAVDVGAEVLVTACPYCITNFE
CHHHCCHHHHHHHHCCCCCCEEHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCC
DSRVTMGLDDRIEVKEITEVISELI
CCEEEECCCCCCCHHHHHHHHHHHC
>Mature Secondary Structure
METIAPFKEIIEEVKAHGGDAFKRCFQCGLCDAVCPWNKVRQFSMRKIVREATFGLTDIE
CCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
SEEMWRCTTCGRCPQQCPRDVKQIESGVALRRIATEYGVFPHSVQPIKSIRGSLVGSGNP
CHHCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
LNEERGKRADWARGLDVKPFAEGMEILYFPDCYACYDPRMKKVAVATARILQAAGVDFGI
CCHHHCCCHHHHCCCCCCHHHCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHCCCCEEC
LGDKEVCCGESIRKAGDEEVFQRLAKENIKAFIDAGVKKILVSSPHCYHTFKNEYPEFRV
CCCCCHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEE
NFEIVHITQYLAELIGEGRLKLDPDKVYEKKVTWHDPCYLGRHNGIYDEPRNVLQAVPGL
EEEEHHHHHHHHHHHCCCCEEECHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHCCCC
EFTELPEHHVASLCCGGGGGRIWMETIKGERFCDLRIDQAVDVGAEVLVTACPYCITNFE
CHHHCCHHHHHHHHCCCCCCEEHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCC
DSRVTMGLDDRIEVKEITEVISELI
CCEEEECCCCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]