| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859202
Identifier: 85859202
GI number: 85859202
Start: 1375050
End: 1375697
Strand: Direct
Name: 85859202
Synonym: SYN_02813
Alternate gene names: NA
Gene position: 1375050-1375697 (Clockwise)
Preceding gene: 85859201
Following gene: 85859203
Centisome position: 43.25
GC content: 34.72
Gene sequence:
>648_bases TTGCAGAATTCTTCCTGGATATTTTGGGGTGACAGATATCCTGCTTTTGTCTTATTGCCCTATAGCGATCAGAAACTATA CACTTTAGGACTCATCTTGAAAACTGAAGACAAATCTTCCTTTTCAGAATATTCAACCAGAGAATTTCGTTTTCTGGTTG AATACTTATTGAATAATTTGCATAAAGAAATGCATGTTTACGGAGAGTTGTTTGAACTAATCAAAAAGGAAAGGGAAATT ATAAGAAAGCCCTCCATTGAAGCTTTGAATAACAGTAATACCCAAAAAAAGACTTGTTTATTTAAAGCAGCGATTTTACG GCGAAACAGAGAGGAAACGATAAAGAAATTCAAGAAAATATTATCTTTTGATAGCCGAAATGAACTCACCCTTTCACAGA TTGCCAGCTATGCTGAAAAGAATTTTAAACATCAATTGCTGGGCAGTTGCGAAAAGCTTAGTTCCTTGATTCATTCCATA AAGAATTACAATGAGATGAATAAAAATCTCCTGCAGGATTCTATTTCATGCACGAGATCAACTATATCGTTCATTCAGCA ACTTATATACTCTTCCATTAATTATATGCCATCGGGTGAATTGAACAGGACATTGCCGAACGGGAGATTATTAAACAAGA AAGGGTAG
Upstream 100 bases:
>100_bases AATATTCCTGACGTTCGGGACGATAAAGTTACCGCATTAAAGAACCAAATCGATAATAACACTTATAATGTGAATGCAGA AGAAGTTGCGGAAAAAATGG
Downstream 100 bases:
>100_bases GATGATGTCTATTATTGGAATTCTGGATACAACTAAACTTGCATTGTCAAGTTTTCAGGCGGCGATTGATATTACCGGTT CCAACATCTCGAATGTCAAC
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MQNSSWIFWGDRYPAFVLLPYSDQKLYTLGLILKTEDKSSFSEYSTREFRFLVEYLLNNLHKEMHVYGELFELIKKEREI IRKPSIEALNNSNTQKKTCLFKAAILRRNREETIKKFKKILSFDSRNELTLSQIASYAEKNFKHQLLGSCEKLSSLIHSI KNYNEMNKNLLQDSISCTRSTISFIQQLIYSSINYMPSGELNRTLPNGRLLNKKG
Sequences:
>Translated_215_residues MQNSSWIFWGDRYPAFVLLPYSDQKLYTLGLILKTEDKSSFSEYSTREFRFLVEYLLNNLHKEMHVYGELFELIKKEREI IRKPSIEALNNSNTQKKTCLFKAAILRRNREETIKKFKKILSFDSRNELTLSQIASYAEKNFKHQLLGSCEKLSSLIHSI KNYNEMNKNLLQDSISCTRSTISFIQQLIYSSINYMPSGELNRTLPNGRLLNKKG >Mature_215_residues MQNSSWIFWGDRYPAFVLLPYSDQKLYTLGLILKTEDKSSFSEYSTREFRFLVEYLLNNLHKEMHVYGELFELIKKEREI IRKPSIEALNNSNTQKKTCLFKAAILRRNREETIKKFKKILSFDSRNELTLSQIASYAEKNFKHQLLGSCEKLSSLIHSI KNYNEMNKNLLQDSISCTRSTISFIQQLIYSSINYMPSGELNRTLPNGRLLNKKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25240; Mature: 25240
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNSSWIFWGDRYPAFVLLPYSDQKLYTLGLILKTEDKSSFSEYSTREFRFLVEYLLNNL CCCCCEEEECCCCCEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH HKEMHVYGELFELIKKEREIIRKPSIEALNNSNTQKKTCLFKAAILRRNREETIKKFKKI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH LSFDSRNELTLSQIASYAEKNFKHQLLGSCEKLSSLIHSIKNYNEMNKNLLQDSISCTRS HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TISFIQQLIYSSINYMPSGELNRTLPNGRLLNKKG HHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCC >Mature Secondary Structure MQNSSWIFWGDRYPAFVLLPYSDQKLYTLGLILKTEDKSSFSEYSTREFRFLVEYLLNNL CCCCCEEEECCCCCEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH HKEMHVYGELFELIKKEREIIRKPSIEALNNSNTQKKTCLFKAAILRRNREETIKKFKKI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH LSFDSRNELTLSQIASYAEKNFKHQLLGSCEKLSSLIHSIKNYNEMNKNLLQDSISCTRS HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TISFIQQLIYSSINYMPSGELNRTLPNGRLLNKKG HHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA