| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858372
Identifier: 85858372
GI number: 85858372
Start: 533943
End: 534263
Strand: Direct
Name: 85858372
Synonym: SYN_03039
Alternate gene names: NA
Gene position: 533943-534263 (Clockwise)
Preceding gene: 85858371
Following gene: 85858374
Centisome position: 16.79
GC content: 61.06
Gene sequence:
>321_bases TTGAGAAGGGATGGAAGAATGACGGTTGACGAACAGTTGCGGGAAATGGTGAAGGCCTGCGGGCTTCCCGTGCGGGGAAG TTACCGGAACGCCGAGGTCTGCATGATCCTCGGGTTTTCCCGGGCGACGTTCTGCCGGCTCATCGATGCGTGGCAGCCCG ACGACAACGGCAATCCCGTCGTTCCCTATTCCCTGAAATCCTACATGCTCCGGCAGGAACGCCGGGTAAGCTGGGACGAG CTGGCGGCCTTCCTGGAGCGCAACGACACATGGGAGCGCCGCTACGGGATGCAGGACGAGCGGCAACTGAGCCTGTTATA A
Upstream 100 bases:
>100_bases GTTCAACTACGATCTGAAAAAGACGTCCTGATGACGTCTTCCTTTCCTTCCGGAGGGCGGGGCGGCGACTTCTCTTCCGG AGGGGAGGAAAGATTTCATT
Downstream 100 bases:
>100_bases CAGGTGTTATCCGGCGACAAACTTTTAAGAACGGGGAGAGGCCATTTCCCGAATGGTATTCTCGTCAAAGAAATCGATAG CGGGCAGCCCGGCCCTTTCC
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MRRDGRMTVDEQLREMVKACGLPVRGSYRNAEVCMILGFSRATFCRLIDAWQPDDNGNPVVPYSLKSYMLRQERRVSWDE LAAFLERNDTWERRYGMQDERQLSLL
Sequences:
>Translated_106_residues MRRDGRMTVDEQLREMVKACGLPVRGSYRNAEVCMILGFSRATFCRLIDAWQPDDNGNPVVPYSLKSYMLRQERRVSWDE LAAFLERNDTWERRYGMQDERQLSLL >Mature_106_residues MRRDGRMTVDEQLREMVKACGLPVRGSYRNAEVCMILGFSRATFCRLIDAWQPDDNGNPVVPYSLKSYMLRQERRVSWDE LAAFLERNDTWERRYGMQDERQLSLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12566; Mature: 12566
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRDGRMTVDEQLREMVKACGLPVRGSYRNAEVCMILGFSRATFCRLIDAWQPDDNGNPV CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCE VPYSLKSYMLRQERRVSWDELAAFLERNDTWERRYGMQDERQLSLL ECHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCC >Mature Secondary Structure MRRDGRMTVDEQLREMVKACGLPVRGSYRNAEVCMILGFSRATFCRLIDAWQPDDNGNPV CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCE VPYSLKSYMLRQERRVSWDELAAFLERNDTWERRYGMQDERQLSLL ECHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA