Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85858372

Identifier: 85858372

GI number: 85858372

Start: 533943

End: 534263

Strand: Direct

Name: 85858372

Synonym: SYN_03039

Alternate gene names: NA

Gene position: 533943-534263 (Clockwise)

Preceding gene: 85858371

Following gene: 85858374

Centisome position: 16.79

GC content: 61.06

Gene sequence:

>321_bases
TTGAGAAGGGATGGAAGAATGACGGTTGACGAACAGTTGCGGGAAATGGTGAAGGCCTGCGGGCTTCCCGTGCGGGGAAG
TTACCGGAACGCCGAGGTCTGCATGATCCTCGGGTTTTCCCGGGCGACGTTCTGCCGGCTCATCGATGCGTGGCAGCCCG
ACGACAACGGCAATCCCGTCGTTCCCTATTCCCTGAAATCCTACATGCTCCGGCAGGAACGCCGGGTAAGCTGGGACGAG
CTGGCGGCCTTCCTGGAGCGCAACGACACATGGGAGCGCCGCTACGGGATGCAGGACGAGCGGCAACTGAGCCTGTTATA
A

Upstream 100 bases:

>100_bases
GTTCAACTACGATCTGAAAAAGACGTCCTGATGACGTCTTCCTTTCCTTCCGGAGGGCGGGGCGGCGACTTCTCTTCCGG
AGGGGAGGAAAGATTTCATT

Downstream 100 bases:

>100_bases
CAGGTGTTATCCGGCGACAAACTTTTAAGAACGGGGAGAGGCCATTTCCCGAATGGTATTCTCGTCAAAGAAATCGATAG
CGGGCAGCCCGGCCCTTTCC

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MRRDGRMTVDEQLREMVKACGLPVRGSYRNAEVCMILGFSRATFCRLIDAWQPDDNGNPVVPYSLKSYMLRQERRVSWDE
LAAFLERNDTWERRYGMQDERQLSLL

Sequences:

>Translated_106_residues
MRRDGRMTVDEQLREMVKACGLPVRGSYRNAEVCMILGFSRATFCRLIDAWQPDDNGNPVVPYSLKSYMLRQERRVSWDE
LAAFLERNDTWERRYGMQDERQLSLL
>Mature_106_residues
MRRDGRMTVDEQLREMVKACGLPVRGSYRNAEVCMILGFSRATFCRLIDAWQPDDNGNPVVPYSLKSYMLRQERRVSWDE
LAAFLERNDTWERRYGMQDERQLSLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12566; Mature: 12566

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRDGRMTVDEQLREMVKACGLPVRGSYRNAEVCMILGFSRATFCRLIDAWQPDDNGNPV
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCE
VPYSLKSYMLRQERRVSWDELAAFLERNDTWERRYGMQDERQLSLL
ECHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRRDGRMTVDEQLREMVKACGLPVRGSYRNAEVCMILGFSRATFCRLIDAWQPDDNGNPV
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCE
VPYSLKSYMLRQERRVSWDELAAFLERNDTWERRYGMQDERQLSLL
ECHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA