| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858356
Identifier: 85858356
GI number: 85858356
Start: 523249
End: 523485
Strand: Direct
Name: 85858356
Synonym: SYN_02335
Alternate gene names: NA
Gene position: 523249-523485 (Clockwise)
Preceding gene: 85858354
Following gene: 85858362
Centisome position: 16.46
GC content: 48.52
Gene sequence:
>237_bases TTGCGAAAGGAGGAATACGACTATGCCAGTAGGGAAGAAGAAGGGACCACTACCGGACGGGCATCCACTCAAGGGCGGGT TAATCATCGTCGGAATGAAGAAACCAGTGCCACTGGAGAGGCAATCGACAGAGGGACAGCCAGCAAAAGAGGAAATGCAA TCAGACACGACAAACACAAACACAGATCAATAGAAAAAATCGGGAGGAGAATATGGTTATGTCCAAAACTGGGCTGA
Upstream 100 bases:
>100_bases TGGATCGGTTACTTGCAACCGCTATAAAAATGATGCTAAAGGCCGGGATCAGAATGTCTGTTTTAAGCCCTATGCCTTTC TTGGCATGGGGTTTTTTGTT
Downstream 100 bases:
>100_bases TGATACGGAAGGGAGCGGGATCATTGATCAGGGAAGCATCAGTGGATGAGCCGATTTACACTCGAGGATTCGCAATCTGA GGGTTTTATTCGATACAGTC
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MRKEEYDYASREEEGTTTGRASTQGRVNHRRNEETSATGEAIDRGTASKRGNAIRHDKHKHRSIEKIGRRIWLCPKLG
Sequences:
>Translated_78_residues MRKEEYDYASREEEGTTTGRASTQGRVNHRRNEETSATGEAIDRGTASKRGNAIRHDKHKHRSIEKIGRRIWLCPKLG >Mature_78_residues MRKEEYDYASREEEGTTTGRASTQGRVNHRRNEETSATGEAIDRGTASKRGNAIRHDKHKHRSIEKIGRRIWLCPKLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8949; Mature: 8949
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKEEYDYASREEEGTTTGRASTQGRVNHRRNEETSATGEAIDRGTASKRGNAIRHDKHK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHH HRSIEKIGRRIWLCPKLG HHHHHHHHHEECCCCCCC >Mature Secondary Structure MRKEEYDYASREEEGTTTGRASTQGRVNHRRNEETSATGEAIDRGTASKRGNAIRHDKHK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHH HRSIEKIGRRIWLCPKLG HHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA