Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
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Accession | NC_007759 |
Length | 3,179,300 |
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The map label for this gene is yveL [H]
Identifier: 85858281
GI number: 85858281
Start: 444631
End: 445500
Strand: Direct
Name: yveL [H]
Synonym: SYN_03031
Alternate gene names: 85858281
Gene position: 444631-445500 (Clockwise)
Preceding gene: 85858280
Following gene: 85858282
Centisome position: 13.99
GC content: 58.74
Gene sequence:
>870_bases GTGAATGCCATGAGTAAATTGCAGAAAGCGCTGGAAAAGGCCAAGGAGGAGCGGGAAAGTACCTTGCTGGAATTAAGGCA GCTCCTGGAAAATCCACAGGATAACGAGGACCGGCCCGCGTTGAAGCTGCTTGACACGCCGGACAGAATAACCCAGCCGG CGGATGTGGATGAGAAAGTCGACCGGGTATCGCCCGTCTACAGCCAGTCCCGCGCCGTGACGCTGAACCCGGATGTGATG GAGCGCAACCGCTGTGTGGCCATGTTCCCGAATCAGGAGGAAGTCGAGGCCTACCGGGTCCTGCGGACGCAGATCCTGAA CCGGACAAGGGAGACCGGCGGCAATCTGATCATGGTCACCAGCGCCCTGCCGGGGGAGGGAAAGACCCTGACGGCGATCA ATCTGGCCCTGACCTTTGCGAGGGAATACAAGCAGACGGTTCTCCTTGTGGATTGCGACTTGAAGAAGCAGAACATTCAC GAGGTGATGGGTTTTGAAAGCGACAAAGGGCTGGTGGACAACCTGCTTGGGGAGTGCTCCGCGGGCGACCTTTTCGTCTG GCCGGCCGTCGAGAAGATGACCCTGATTTCAGGAGGAAAAACCACCGGTGAAAGCAGTGAGATGATGGGATCGCCGAGGA TGAAGAACCTGGTGGCGGACATGAAGCACCGTTATCCGGAGCGGTACATCTTTTTTGATGTTCCTCCCATCCTCACCGGC GCCGACGCGCTGGCCTTCGCCCCCCTGATGGATCACATCCTGATGGTCGTCCAGGCCGACAAGACCCCCGTGGGCGAAGT GAACAAAGCCGCCCAGCTGCTCCCGAAGGAGAAACTCCTGGGACTGGTGCTGAACCGCTATCACGCCTGA
Upstream 100 bases:
>100_bases TGTCGATGTCTTCATCGCCCGGCTCATGCGGCGGTTTTCGATATGAGGGTTGTTCTCATAGAGGTTCTGAATAAAGTATC TGACGACTGATCAATAAAAG
Downstream 100 bases:
>100_bases GGTCTGAGGACTGAGGCGGGCTGATAATCCGTCTCGACAGAAAATTCTCAAATTCTTCATTAAAAAAAGAGATTCCGGCT GCAAGAGAGCTTGAATCTTT
Product: tyrosine-protein kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MNAMSKLQKALEKAKEERESTLLELRQLLENPQDNEDRPALKLLDTPDRITQPADVDEKVDRVSPVYSQSRAVTLNPDVM ERNRCVAMFPNQEEVEAYRVLRTQILNRTRETGGNLIMVTSALPGEGKTLTAINLALTFAREYKQTVLLVDCDLKKQNIH EVMGFESDKGLVDNLLGECSAGDLFVWPAVEKMTLISGGKTTGESSEMMGSPRMKNLVADMKHRYPERYIFFDVPPILTG ADALAFAPLMDHILMVVQADKTPVGEVNKAAQLLPKEKLLGLVLNRYHA
Sequences:
>Translated_289_residues MNAMSKLQKALEKAKEERESTLLELRQLLENPQDNEDRPALKLLDTPDRITQPADVDEKVDRVSPVYSQSRAVTLNPDVM ERNRCVAMFPNQEEVEAYRVLRTQILNRTRETGGNLIMVTSALPGEGKTLTAINLALTFAREYKQTVLLVDCDLKKQNIH EVMGFESDKGLVDNLLGECSAGDLFVWPAVEKMTLISGGKTTGESSEMMGSPRMKNLVADMKHRYPERYIFFDVPPILTG ADALAFAPLMDHILMVVQADKTPVGEVNKAAQLLPKEKLLGLVLNRYHA >Mature_289_residues MNAMSKLQKALEKAKEERESTLLELRQLLENPQDNEDRPALKLLDTPDRITQPADVDEKVDRVSPVYSQSRAVTLNPDVM ERNRCVAMFPNQEEVEAYRVLRTQILNRTRETGGNLIMVTSALPGEGKTLTAINLALTFAREYKQTVLLVDCDLKKQNIH EVMGFESDKGLVDNLLGECSAGDLFVWPAVEKMTLISGGKTTGESSEMMGSPRMKNLVADMKHRYPERYIFFDVPPILTG ADALAFAPLMDHILMVVQADKTPVGEVNKAAQLLPKEKLLGLVLNRYHA
Specific function: Required For The Extracellular Polysaccharide Colanic Acid Synthesis. The Autophosphorylated Form Is Inactive. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner membrane (Probable) [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CpsD/CapB family [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=198, Percent_Identity=29.2929292929293, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI1787216, Length=198, Percent_Identity=27.7777777777778, Blast_Score=71, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: =2.7.10.2 [H]
Molecular weight: Translated: 32339; Mature: 32339
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAMSKLQKALEKAKEERESTLLELRQLLENPQDNEDRPALKLLDTPDRITQPADVDEKV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHCCCCCHHHHH DRVSPVYSQSRAVTLNPDVMERNRCVAMFPNQEEVEAYRVLRTQILNRTRETGGNLIMVT HHHCHHHHCCCEEEECCHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE SALPGEGKTLTAINLALTFAREYKQTVLLVDCDLKKQNIHEVMGFESDKGLVDNLLGECS ECCCCCCCEEEHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHCCCC AGDLFVWPAVEKMTLISGGKTTGESSEMMGSPRMKNLVADMKHRYPERYIFFDVPPILTG CCCEEEECCHHHEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHC ADALAFAPLMDHILMVVQADKTPVGEVNKAAQLLPKEKLLGLVLNRYHA CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MNAMSKLQKALEKAKEERESTLLELRQLLENPQDNEDRPALKLLDTPDRITQPADVDEKV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHCCCCCHHHHH DRVSPVYSQSRAVTLNPDVMERNRCVAMFPNQEEVEAYRVLRTQILNRTRETGGNLIMVT HHHCHHHHCCCEEEECCHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE SALPGEGKTLTAINLALTFAREYKQTVLLVDCDLKKQNIHEVMGFESDKGLVDNLLGECS ECCCCCCCEEEHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHCCCC AGDLFVWPAVEKMTLISGGKTTGESSEMMGSPRMKNLVADMKHRYPERYIFFDVPPILTG CCCEEEECCHHHEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHC ADALAFAPLMDHILMVVQADKTPVGEVNKAAQLLPKEKLLGLVLNRYHA CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]