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The map label for this gene is wza [H]

Identifier: 85858279

GI number: 85858279

Start: 442261

End: 442977

Strand: Direct

Name: wza [H]

Synonym: SYN_01205

Alternate gene names: 85858279

Gene position: 442261-442977 (Clockwise)

Preceding gene: 85858278

Following gene: 85858280

Centisome position: 13.91

GC content: 51.74

Gene sequence:

>717_bases
GTGATAAATATCAAACAATTTCTTGATATATTGGACATATCGGAAGAAATGAGCTATAAATTCCAAATGTATATTGAAGG
GGGACATCACATGAAGCACAGATACTTACCGCTTTTCTTGACTGTTCTGTTGATCTGCATTTTTGCATTGGCGGCTGGGC
CGCTTTGGGCAGCCGGGCCGAAGGAAGCTCCTGCGGCAGCCGGAAAGGCCAAACCTGAGTCTCTGGGGCCGACTGGGGAT
TATGTCATCGGGCCGGGGGATGTTCTGGACATCGCGGTCTGGAAGGACGAAGCCCTGACGAAATCCGTCGTGGTCCGTCC
CGACGGGAAAATCTCCTTTCCGCTGGTCGGTGAAATAGCGGCAGGGGGAATGACCACCGCCGAATTGAAGAAAGAGCTGG
AGACACGGCTTGCCCGTTACGTTCCCGATGTGGATCTTTTCGTCAACGTTGCCCAGATCAACAGCATGATCGTATACGTC
ATCGGCAAGGTCAACAGCCCCGGGCGCCTGGTCTTGAATGCCCCCATCAATGTCCTGCAGGTTCTGGCCACCGCCGGCGG
AATGAATACCTATGCCAAGCGGAACAGCATCCGAATTTTCCGGCAGGAAGGGCTTAAAACCCGCATTTTTTACTTTAATT
ATGATGATGTGTCCGAAGGCAAAAACGTGGAGAAGAATATCCTGCTTCAGCGGGGCGATGTGATTGTCATTCCTTAG

Upstream 100 bases:

>100_bases
CGGGTCAGGCCGAGCAGGGAAAGCAGAGGCTGAACTTTGCGGTACGCAGCGGCGATGGGTTTGCCGGCCGGCCGGATGCC
CTCAAGGCATTGGGAATGCA

Downstream 100 bases:

>100_bases
CAACTTCAGCACGGGAAGGAATTGGAGAGGGAATACGTGGAAGAAAATACGCTGGAATTCAAAAAACTGATCGGGATTCT
GAAACGCCGGAAATGGGAGA

Product: polysaccharide export periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MINIKQFLDILDISEEMSYKFQMYIEGGHHMKHRYLPLFLTVLLICIFALAAGPLWAAGPKEAPAAAGKAKPESLGPTGD
YVIGPGDVLDIAVWKDEALTKSVVVRPDGKISFPLVGEIAAGGMTTAELKKELETRLARYVPDVDLFVNVAQINSMIVYV
IGKVNSPGRLVLNAPINVLQVLATAGGMNTYAKRNSIRIFRQEGLKTRIFYFNYDDVSEGKNVEKNILLQRGDVIVIP

Sequences:

>Translated_238_residues
MINIKQFLDILDISEEMSYKFQMYIEGGHHMKHRYLPLFLTVLLICIFALAAGPLWAAGPKEAPAAAGKAKPESLGPTGD
YVIGPGDVLDIAVWKDEALTKSVVVRPDGKISFPLVGEIAAGGMTTAELKKELETRLARYVPDVDLFVNVAQINSMIVYV
IGKVNSPGRLVLNAPINVLQVLATAGGMNTYAKRNSIRIFRQEGLKTRIFYFNYDDVSEGKNVEKNILLQRGDVIVIP
>Mature_238_residues
MINIKQFLDILDISEEMSYKFQMYIEGGHHMKHRYLPLFLTVLLICIFALAAGPLWAAGPKEAPAAAGKAKPESLGPTGD
YVIGPGDVLDIAVWKDEALTKSVVVRPDGKISFPLVGEIAAGGMTTAELKKELETRLARYVPDVDLFVNVAQINSMIVYV
IGKVNSPGRLVLNAPINVLQVLATAGGMNTYAKRNSIRIFRQEGLKTRIFYFNYDDVSEGKNVEKNILLQRGDVIVIP

Specific function: Probably involved in the export of the extracellular polysaccharide colanic acid from the cell to medium [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1788376, Length=170, Percent_Identity=30, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1787218, Length=171, Percent_Identity=28.6549707602339, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 26176; Mature: 26176

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINIKQFLDILDISEEMSYKFQMYIEGGHHMKHRYLPLFLTVLLICIFALAAGPLWAAGP
CCCHHHHHHHHCCCHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KEAPAAAGKAKPESLGPTGDYVIGPGDVLDIAVWKDEALTKSVVVRPDGKISFPLVGEIA
CCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCEEEECCCCCEECCEEEHHH
AGGMTTAELKKELETRLARYVPDVDLFVNVAQINSMIVYVIGKVNSPGRLVLNAPINVLQ
CCCCCHHHHHHHHHHHHHHHCCCHHHEEEHHHHCCEEEEEEECCCCCCEEEEECCHHHHH
VLATAGGMNTYAKRNSIRIFRQEGLKTRIFYFNYDDVSEGKNVEKNILLQRGDVIVIP
HHHHCCCCCHHHCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCHHHEEECCCEEEEC
>Mature Secondary Structure
MINIKQFLDILDISEEMSYKFQMYIEGGHHMKHRYLPLFLTVLLICIFALAAGPLWAAGP
CCCHHHHHHHHCCCHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KEAPAAAGKAKPESLGPTGDYVIGPGDVLDIAVWKDEALTKSVVVRPDGKISFPLVGEIA
CCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCEEEECCCCCEECCEEEHHH
AGGMTTAELKKELETRLARYVPDVDLFVNVAQINSMIVYVIGKVNSPGRLVLNAPINVLQ
CCCCCHHHHHHHHHHHHHHHCCCHHHEEEHHHHCCEEEEEEECCCCCCEEEEECCHHHHH
VLATAGGMNTYAKRNSIRIFRQEGLKTRIFYFNYDDVSEGKNVEKNILLQRGDVIVIP
HHHHCCCCCHHHCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCHHHEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]