Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
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Accession | NC_007759 |
Length | 3,179,300 |
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The map label for this gene is 85858276
Identifier: 85858276
GI number: 85858276
Start: 437107
End: 438690
Strand: Direct
Name: 85858276
Synonym: SYN_01097
Alternate gene names: NA
Gene position: 437107-438690 (Clockwise)
Preceding gene: 85858275
Following gene: 85858277
Centisome position: 13.75
GC content: 55.62
Gene sequence:
>1584_bases ATGCCAATGAATGAAATTCTGACTTTCCTGAAAAGCGTCAAGCCGGCAAGCTGGCTGAAAGGAATTCTCTATAGCCTTCT CATCGTCCTGATCTACCGGTCCAGTCTCCAGTGGCTGATCCTTCGCGACTGGCCGAGGGAAGACTATTCTTACGCCTGCC TCATCCCCCTGGTTGTCCTCTATCTGCTTTGGGAAAAGAGAAGCGAGCTGATATCAACGCCTTCAACGCCATCCTGGATG GGGCTGTTCCCTCTGGGCGTGGGATTGGTCCTGTTCTGGCTGGGCGAACTGGGGGGCGAGTTTTTTGCCCAGTATATTTC CCTGTGGCTTGTGATCGTCGGCGTGTGCTGGATGCATCTGGGCTGGCGGAAGCTGAAGACCGTCGGTTTTGCCTTCATCA TGATGCTGGCCATGTTTCCGTTCCCCTATTTCATCAACGCGAAGATCTCCCTGACCCTGAAGCTCCTTTCCTCCCAGCTT GGCGTCTGGATGCTGCAACTTTACGGGATGTCGGCCTATCGGGAAGGGAACGTCATCGATCTCGGCTTTACGCAGTTGCA GGTCGTCGATGCCTGCAGCGGCCTGCGCTATCTTTTCCCGCTGATGATCCTGAGCCTCATCGTGGCTTACTGGTTCAAGG GCCGTTTCTGGAAAAAGGCGGTTCTTTTCCTCTCGTCCATTCCCATCGCCATTGTTGTGAACAGCTTCCGGATTGCCCTG ACGGGGGTGCTGTACAGTTTCTGGGGGCCTGCCGTGGCGGAGGGATTCTTTCATGGATTTTCGGGCTGGCTGATTTTTCT GTTCACCACGGCAATCCTGCTGGCAGAAATGTGGGTGTTGAAGAAGATCGGGAAAGGGATGGAGAAGGACGAGGAATCCA TACGATCAGAGGTTGGCCAGGCGGCGGATAATGCGGCAGGGGCCTCGGTTGGCTGGAGCCGCTCTTTCCTTCAGCCCCAG TTTATCGCCGTGGGAGTGGTTCTGGGGTTGACGCTGGGCTTGTCGCAGGGCGTGGAATTCCGGGAAAAGATACCCATCAA GCAGTCTCTCGATCAATTTCCTCTTCAGGTGGGCGAATGGAGCGGCACCCGGGAAACCATGGAACAGCAGTTTATCGATG AACTGGATTTCAGTGACTATGTCATGGTTACCTACCGGGATCGACAGAACCAGACGGTTCACTTTTACACCGCCTATTAT GAAAATCAGCAGAAGGGGGAATCCATCCATTCACCCGAAAGCTGTCTGCCCGGGAGCGGATGGAAATTCAGCCGGGCGGA GGAGATCGCCCTGGCGGCTGGAAACGGCGCTTCCCTGCGGGTCAATCGAGTTGTCATGGAAAAGGAAGGAGAACGGCAGT TGGCCTATTACTGGTTCGCCCAGCGGGGCCGCGTGCTGACCAAGCTCTATCAGTTGAAGCTTTATAACTTCTGGGATGCC CTGACACGGCAGCGGACCGATGGCGCGCTGATCCGGGTGATCACACCCATTGCGGGCTCGGAAAAGCCGGAAGACGCGGA CACGCGGCTTCGAGGTTTCCTGAATGAGGCCATTCCTCTGCTTCCCGAATTCATCCCCAATTGA
Upstream 100 bases:
>100_bases AAATCGACTCCTGTCTTTCTCTCCTGGGTCGCAAGAGAAAAAATCCGCCAGATCGGGCGGAAAAACCCGGATTGAAAGCT TCAATCCGAGAAAGCATCTC
Downstream 100 bases:
>100_bases TCGATGTCCTTTTAACCCCACCTCATGCCCATCCTTTTTGCCTTCATTCTGTCCCTGATCGTCACGATCGTGCTCATCCC GGTCCTGATTTCGGGGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: EpsI Family Protein; Methanolan Biosynthesis EpsI Protein; Exopolysaccharide Methanolan Synthase; Transmembrane Exosortase; Exopolysaccharide Synthesis Multitransmembrane Protein H; Exosortase Protein
Number of amino acids: Translated: 527; Mature: 526
Protein sequence:
>527_residues MPMNEILTFLKSVKPASWLKGILYSLLIVLIYRSSLQWLILRDWPREDYSYACLIPLVVLYLLWEKRSELISTPSTPSWM GLFPLGVGLVLFWLGELGGEFFAQYISLWLVIVGVCWMHLGWRKLKTVGFAFIMMLAMFPFPYFINAKISLTLKLLSSQL GVWMLQLYGMSAYREGNVIDLGFTQLQVVDACSGLRYLFPLMILSLIVAYWFKGRFWKKAVLFLSSIPIAIVVNSFRIAL TGVLYSFWGPAVAEGFFHGFSGWLIFLFTTAILLAEMWVLKKIGKGMEKDEESIRSEVGQAADNAAGASVGWSRSFLQPQ FIAVGVVLGLTLGLSQGVEFREKIPIKQSLDQFPLQVGEWSGTRETMEQQFIDELDFSDYVMVTYRDRQNQTVHFYTAYY ENQQKGESIHSPESCLPGSGWKFSRAEEIALAAGNGASLRVNRVVMEKEGERQLAYYWFAQRGRVLTKLYQLKLYNFWDA LTRQRTDGALIRVITPIAGSEKPEDADTRLRGFLNEAIPLLPEFIPN
Sequences:
>Translated_527_residues MPMNEILTFLKSVKPASWLKGILYSLLIVLIYRSSLQWLILRDWPREDYSYACLIPLVVLYLLWEKRSELISTPSTPSWM GLFPLGVGLVLFWLGELGGEFFAQYISLWLVIVGVCWMHLGWRKLKTVGFAFIMMLAMFPFPYFINAKISLTLKLLSSQL GVWMLQLYGMSAYREGNVIDLGFTQLQVVDACSGLRYLFPLMILSLIVAYWFKGRFWKKAVLFLSSIPIAIVVNSFRIAL TGVLYSFWGPAVAEGFFHGFSGWLIFLFTTAILLAEMWVLKKIGKGMEKDEESIRSEVGQAADNAAGASVGWSRSFLQPQ FIAVGVVLGLTLGLSQGVEFREKIPIKQSLDQFPLQVGEWSGTRETMEQQFIDELDFSDYVMVTYRDRQNQTVHFYTAYY ENQQKGESIHSPESCLPGSGWKFSRAEEIALAAGNGASLRVNRVVMEKEGERQLAYYWFAQRGRVLTKLYQLKLYNFWDA LTRQRTDGALIRVITPIAGSEKPEDADTRLRGFLNEAIPLLPEFIPN >Mature_526_residues PMNEILTFLKSVKPASWLKGILYSLLIVLIYRSSLQWLILRDWPREDYSYACLIPLVVLYLLWEKRSELISTPSTPSWMG LFPLGVGLVLFWLGELGGEFFAQYISLWLVIVGVCWMHLGWRKLKTVGFAFIMMLAMFPFPYFINAKISLTLKLLSSQLG VWMLQLYGMSAYREGNVIDLGFTQLQVVDACSGLRYLFPLMILSLIVAYWFKGRFWKKAVLFLSSIPIAIVVNSFRIALT GVLYSFWGPAVAEGFFHGFSGWLIFLFTTAILLAEMWVLKKIGKGMEKDEESIRSEVGQAADNAAGASVGWSRSFLQPQF IAVGVVLGLTLGLSQGVEFREKIPIKQSLDQFPLQVGEWSGTRETMEQQFIDELDFSDYVMVTYRDRQNQTVHFYTAYYE NQQKGESIHSPESCLPGSGWKFSRAEEIALAAGNGASLRVNRVVMEKEGERQLAYYWFAQRGRVLTKLYQLKLYNFWDAL TRQRTDGALIRVITPIAGSEKPEDADTRLRGFLNEAIPLLPEFIPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60072; Mature: 59941
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMNEILTFLKSVKPASWLKGILYSLLIVLIYRSSLQWLILRDWPREDYSYACLIPLVVL CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHH YLLWEKRSELISTPSTPSWMGLFPLGVGLVLFWLGELGGEFFAQYISLWLVIVGVCWMHL HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWRKLKTVGFAFIMMLAMFPFPYFINAKISLTLKLLSSQLGVWMLQLYGMSAYREGNVID HHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEE LGFTQLQVVDACSGLRYLFPLMILSLIVAYWFKGRFWKKAVLFLSSIPIAIVVNSFRIAL ECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHEEHHHHHHHH TGVLYSFWGPAVAEGFFHGFSGWLIFLFTTAILLAEMWVLKKIGKGMEKDEESIRSEVGQ HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AADNAAGASVGWSRSFLQPQFIAVGVVLGLTLGLSQGVEFREKIPIKQSLDQFPLQVGEW HHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHCCCCCCCC SGTRETMEQQFIDELDFSDYVMVTYRDRQNQTVHFYTAYYENQQKGESIHSPESCLPGSG CCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEEECCHHCCCCCCCCCCCCCCCC WKFSRAEEIALAAGNGASLRVNRVVMEKEGERQLAYYWFAQRGRVLTKLYQLKLYNFWDA CCCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH LTRQRTDGALIRVITPIAGSEKPEDADTRLRGFLNEAIPLLPEFIPN HHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PMNEILTFLKSVKPASWLKGILYSLLIVLIYRSSLQWLILRDWPREDYSYACLIPLVVL CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHH YLLWEKRSELISTPSTPSWMGLFPLGVGLVLFWLGELGGEFFAQYISLWLVIVGVCWMHL HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWRKLKTVGFAFIMMLAMFPFPYFINAKISLTLKLLSSQLGVWMLQLYGMSAYREGNVID HHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEE LGFTQLQVVDACSGLRYLFPLMILSLIVAYWFKGRFWKKAVLFLSSIPIAIVVNSFRIAL ECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHEEHHHHHHHH TGVLYSFWGPAVAEGFFHGFSGWLIFLFTTAILLAEMWVLKKIGKGMEKDEESIRSEVGQ HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AADNAAGASVGWSRSFLQPQFIAVGVVLGLTLGLSQGVEFREKIPIKQSLDQFPLQVGEW HHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHCCCCCCCC SGTRETMEQQFIDELDFSDYVMVTYRDRQNQTVHFYTAYYENQQKGESIHSPESCLPGSG CCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEEECCHHCCCCCCCCCCCCCCCC WKFSRAEEIALAAGNGASLRVNRVVMEKEGERQLAYYWFAQRGRVLTKLYQLKLYNFWDA CCCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH LTRQRTDGALIRVITPIAGSEKPEDADTRLRGFLNEAIPLLPEFIPN HHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA