Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
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Accession | NC_007759 |
Length | 3,179,300 |
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The map label for this gene is mshA [H]
Identifier: 85858267
GI number: 85858267
Start: 426201
End: 427355
Strand: Direct
Name: mshA [H]
Synonym: SYN_01106
Alternate gene names: 85858267
Gene position: 426201-427355 (Clockwise)
Preceding gene: 85858266
Following gene: 85858268
Centisome position: 13.41
GC content: 33.33
Gene sequence:
>1155_bases ATGAAAGTGTTGGTTGTTGATAATAGCAGATGGTGGGGTGGGGCAGAAAAAAATCTTCAAACTCTTGTTGATAACAGAAG TAATGCCATTGAATTTAATGTACTGTCTGATTATCCAATGAGTCATAATATTACTTATAGAGATTTTTGTGGTGTCCGAT ACCGATTTGACAACTCATATTTTATTAGGTATCTGGATAACAAATATCAAATCAAAGGAATGAGAATATTTCGATTGATT TATAAGTCTTTATATTTAATTCCATCTCTTGTAAGGTATAATCCGGATATAGTCCATTTTAATTTATATAGAAGTTCTGA TATATTAGATATCATTGTCTGTAAAATCTTAAGAAAGAAAGTGGTATTACATATTCGCTCATTGGCAAATCGAATAAAAA TAGCCCCCTTGACAATCAAATTGGCAGACGCAGTGATATGTGTTTCTAAATCAGTCAAACAAGGATTTTCTTTTACTGGC AATAAATATCATGTCATTTATAATGGTATTGACTCAAAGTATTATCATCTTGTTCCCCAAGATCAAGCAAGAGAAAAACT TGGAATCAACTTAACAAGCTTTGTCATCGGGTCGATTGGCAATCTTGAACGTGAGAAAGGTCACGATGTTGCTGTGAAAG CACTGAAAAAAATTATTGATGATGGAAATGTTGTAGTAGCACTAATTATTGTAGGGAAAGATTCAACAATTAATGAGTCG GAAACAAAAAGAATATTAACATTGAGCAAAGATTTAGGTGTTCAAGGCCATATTAAAATATTTTCAATATCTCACAAGGA TATTCACTATGTATATAGTGCCTGTGATATTGTGTTGACACTTTGTATCGATGGGGAAGCTTTTGGTATGATTCCTTTAG AAGCAGCAATGCACAATCGTCCCGTTATCGCTACGAATGTAGGTGCATGCAGAGAGACAATCATCCATAACCAAACAGGG CTTTTATGTGAACCTAATTCACCAGTTGCTTTGGTTCAGGCTATTGACACTATTATGAAAGATAAAAAATATTGTGATCA ACTTACCGAAAGCGCCAGGAATCGTGTTTTACATAAGTATTCAGCCGATGCATACCGTGATTCAGTATATAAAATTTACA TAACGATTACGAAGGAAAATAAGAGAAAACTTTAA
Upstream 100 bases:
>100_bases TGCAAGTATTATAAACACGTTAACGTAATTTTGGCGTTTATTTAAACCATCAAAATCAGGCTCCGTTTGCGGAGTTGTGC AAAGGTTTTAGAAGATTTCA
Downstream 100 bases:
>100_bases CTATGGTAAATCATGGGTTAACAATGTATAAGTTGTGCTTTAGATTATTCTCGCATACTATTGACATAAATTTGCCTTTG TTTTTTTCTGTTTTTCTAAT
Product: glycosyltransferase
Products: NA
Alternate protein names: N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase; GlcNAc-Ins-P N-acetylglucosaminyltransferase [H]
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MKVLVVDNSRWWGGAEKNLQTLVDNRSNAIEFNVLSDYPMSHNITYRDFCGVRYRFDNSYFIRYLDNKYQIKGMRIFRLI YKSLYLIPSLVRYNPDIVHFNLYRSSDILDIIVCKILRKKVVLHIRSLANRIKIAPLTIKLADAVICVSKSVKQGFSFTG NKYHVIYNGIDSKYYHLVPQDQAREKLGINLTSFVIGSIGNLEREKGHDVAVKALKKIIDDGNVVVALIIVGKDSTINES ETKRILTLSKDLGVQGHIKIFSISHKDIHYVYSACDIVLTLCIDGEAFGMIPLEAAMHNRPVIATNVGACRETIIHNQTG LLCEPNSPVALVQAIDTIMKDKKYCDQLTESARNRVLHKYSADAYRDSVYKIYITITKENKRKL
Sequences:
>Translated_384_residues MKVLVVDNSRWWGGAEKNLQTLVDNRSNAIEFNVLSDYPMSHNITYRDFCGVRYRFDNSYFIRYLDNKYQIKGMRIFRLI YKSLYLIPSLVRYNPDIVHFNLYRSSDILDIIVCKILRKKVVLHIRSLANRIKIAPLTIKLADAVICVSKSVKQGFSFTG NKYHVIYNGIDSKYYHLVPQDQAREKLGINLTSFVIGSIGNLEREKGHDVAVKALKKIIDDGNVVVALIIVGKDSTINES ETKRILTLSKDLGVQGHIKIFSISHKDIHYVYSACDIVLTLCIDGEAFGMIPLEAAMHNRPVIATNVGACRETIIHNQTG LLCEPNSPVALVQAIDTIMKDKKYCDQLTESARNRVLHKYSADAYRDSVYKIYITITKENKRKL >Mature_384_residues MKVLVVDNSRWWGGAEKNLQTLVDNRSNAIEFNVLSDYPMSHNITYRDFCGVRYRFDNSYFIRYLDNKYQIKGMRIFRLI YKSLYLIPSLVRYNPDIVHFNLYRSSDILDIIVCKILRKKVVLHIRSLANRIKIAPLTIKLADAVICVSKSVKQGFSFTG NKYHVIYNGIDSKYYHLVPQDQAREKLGINLTSFVIGSIGNLEREKGHDVAVKALKKIIDDGNVVVALIIVGKDSTINES ETKRILTLSKDLGVQGHIKIFSISHKDIHYVYSACDIVLTLCIDGEAFGMIPLEAAMHNRPVIATNVGACRETIIHNQTG LLCEPNSPVALVQAIDTIMKDKKYCDQLTESARNRVLHKYSADAYRDSVYKIYITITKENKRKL
Specific function: Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. MshA subfamily [H]
Homologues:
Organism=Homo sapiens, GI14861836, Length=192, Percent_Identity=32.2916666666667, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI21357469, Length=278, Percent_Identity=25.1798561151079, Blast_Score=75, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR017814 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.250 [H]
Molecular weight: Translated: 43784; Mature: 43784
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLVVDNSRWWGGAEKNLQTLVDNRSNAIEFNVLSDYPMSHNITYRDFCGVRYRFDNSY CEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHCCEEEEECCCE FIRYLDNKYQIKGMRIFRLIYKSLYLIPSLVRYNPDIVHFNLYRSSDILDIIVCKILRKK EEEEECCEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHH VVLHIRSLANRIKIAPLTIKLADAVICVSKSVKQGFSFTGNKYHVIYNGIDSKYYHLVPQ HHHHHHHHHHHEEEEEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEECCC DQAREKLGINLTSFVIGSIGNLEREKGHDVAVKALKKIIDDGNVVVALIIVGKDSTINES HHHHHHHCCCHHHHHHHCCCCCCHHCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCC ETKRILTLSKDLGVQGHIKIFSISHKDIHYVYSACDIVLTLCIDGEAFGMIPLEAAMHNR CCCEEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHEEEEEEECCCCCCEEEHHHHHCCC PVIATNVGACRETIIHNQTGLLCEPNSPVALVQAIDTIMKDKKYCDQLTESARNRVLHKY CEEEECCHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SADAYRDSVYKIYITITKENKRKL CCHHHCCCEEEEEEEEECCCCCCC >Mature Secondary Structure MKVLVVDNSRWWGGAEKNLQTLVDNRSNAIEFNVLSDYPMSHNITYRDFCGVRYRFDNSY CEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHCCEEEEECCCE FIRYLDNKYQIKGMRIFRLIYKSLYLIPSLVRYNPDIVHFNLYRSSDILDIIVCKILRKK EEEEECCEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHH VVLHIRSLANRIKIAPLTIKLADAVICVSKSVKQGFSFTGNKYHVIYNGIDSKYYHLVPQ HHHHHHHHHHHEEEEEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEECCC DQAREKLGINLTSFVIGSIGNLEREKGHDVAVKALKKIIDDGNVVVALIIVGKDSTINES HHHHHHHCCCHHHHHHHCCCCCCHHCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCC ETKRILTLSKDLGVQGHIKIFSISHKDIHYVYSACDIVLTLCIDGEAFGMIPLEAAMHNR CCCEEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHEEEEEEECCCCCCEEEHHHHHCCC PVIATNVGACRETIIHNQTGLLCEPNSPVALVQAIDTIMKDKKYCDQLTESARNRVLHKY CEEEECCHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SADAYRDSVYKIYITITKENKRKL CCHHHCCCEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA