| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is vatD [H]
Identifier: 85858232
GI number: 85858232
Start: 386859
End: 387449
Strand: Direct
Name: vatD [H]
Synonym: SYN_01140
Alternate gene names: 85858232
Gene position: 386859-387449 (Clockwise)
Preceding gene: 85858231
Following gene: 85858233
Centisome position: 12.17
GC content: 50.93
Gene sequence:
>591_bases ATGAGGTCATCAACGATGAGAGGAAATACGGCAAGGTTCACATGGACCTTGTGTCAAATTCTCTGTGAGGCGCCTTACCG GTTGACCATCATGCCCTGGAAGAAAGCCATGCTGGCGTCATGCGGGAAGAATGTCTTATTGCAGAGAGGATGCAAAATGA CCTGGCAGAATGTTTATATTGGCGATGACGTCACTGTCGGTCCCAACGCTCTGTTTCTGTGCACCCGCGCCAGGATAAGA ATTGGAAGCCACACCATGTTCGGACCCGGTGTGACGATGATCACCGGCGGCCATCGGATGGATGTTGCGGGACGTTATAT GAATTCAATTACCAATGATGAAAAGCTGCCCGAAAATGACAGGGATATCGTTCTTGAAGGAGACAACTGGATCGGAGCGA ATGCCACGATTCTGAAAGGGGTAACCATCGGAGAAGGGGCTGTGGTGGCTGCGGGAGCGGTGGTCACTAAGAATATACCG GCATATTCCATCTGGGGCGGCGTTCCGGCTGAACGGATCGGCATGAGATTTAACGACGAAACGCTGTCAATTCATAAAGA GTTGATGAAAAAAGCAGGGTTTCCGGGCTGA
Upstream 100 bases:
>100_bases CCGGCATCCGTGAGAGAACGCATGTCCCGCTGGAATGTAAATAAAGTCAGGGATGCGTATTTAATCAACAGAGTCATGGA ATGTCTGATCGGGATTTATG
Downstream 100 bases:
>100_bases TGAATGATGACTGATCAGAAAACACTCAAGATTGTAGAAGACCTTTGCGGCGCGCTGGCGGAAGAAAAAGTCGATTATTG CCACTGGAAAAGCAACGAGG
Product: acetyltransferase
Products: CoA; acetylmaltose [C]
Alternate protein names: Virginiamycin acetyltransferase D; Vat(D) [H]
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MRSSTMRGNTARFTWTLCQILCEAPYRLTIMPWKKAMLASCGKNVLLQRGCKMTWQNVYIGDDVTVGPNALFLCTRARIR IGSHTMFGPGVTMITGGHRMDVAGRYMNSITNDEKLPENDRDIVLEGDNWIGANATILKGVTIGEGAVVAAGAVVTKNIP AYSIWGGVPAERIGMRFNDETLSIHKELMKKAGFPG
Sequences:
>Translated_196_residues MRSSTMRGNTARFTWTLCQILCEAPYRLTIMPWKKAMLASCGKNVLLQRGCKMTWQNVYIGDDVTVGPNALFLCTRARIR IGSHTMFGPGVTMITGGHRMDVAGRYMNSITNDEKLPENDRDIVLEGDNWIGANATILKGVTIGEGAVVAAGAVVTKNIP AYSIWGGVPAERIGMRFNDETLSIHKELMKKAGFPG >Mature_196_residues MRSSTMRGNTARFTWTLCQILCEAPYRLTIMPWKKAMLASCGKNVLLQRGCKMTWQNVYIGDDVTVGPNALFLCTRARIR IGSHTMFGPGVTMITGGHRMDVAGRYMNSITNDEKLPENDRDIVLEGDNWIGANATILKGVTIGEGAVVAAGAVVTKNIP AYSIWGGVPAERIGMRFNDETLSIHKELMKKAGFPG
Specific function: Inactivates the A compounds of streptogramin antibiotics by acetylation, thus providing resistance to these antibiotics [H]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1786664, Length=117, Percent_Identity=35.042735042735, Blast_Score=64, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6322243, Length=141, Percent_Identity=32.6241134751773, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: 2.3.1.79 [C]
Molecular weight: Translated: 21467; Mature: 21467
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSTMRGNTARFTWTLCQILCEAPYRLTIMPWKKAMLASCGKNVLLQRGCKMTWQNVYI CCCCCCCCCCEEHHHHHHHHHHCCCCEEEECCHHHHHHHHCCHHHHHHCCCCCEEEEEEE GDDVTVGPNALFLCTRARIRIGSHTMFGPGVTMITGGHRMDVAGRYMNSITNDEKLPEND CCCCEECCCEEEEEEECEEEECCEEEECCCEEEEECCCEECHHHHHHHHCCCCCCCCCCC RDIVLEGDNWIGANATILKGVTIGEGAVVAAGAVVTKNIPAYSIWGGVPAERIGMRFNDE CEEEEECCCEECCCCEEEEEEEECCCCEEEECEEEECCCCCEEECCCCCHHHHCCEECCH TLSIHKELMKKAGFPG HHHHHHHHHHHCCCCC >Mature Secondary Structure MRSSTMRGNTARFTWTLCQILCEAPYRLTIMPWKKAMLASCGKNVLLQRGCKMTWQNVYI CCCCCCCCCCEEHHHHHHHHHHCCCCEEEECCHHHHHHHHCCHHHHHHCCCCCEEEEEEE GDDVTVGPNALFLCTRARIRIGSHTMFGPGVTMITGGHRMDVAGRYMNSITNDEKLPEND CCCCEECCCEEEEEEECEEEECCEEEECCCEEEEECCCEECHHHHHHHHCCCCCCCCCCC RDIVLEGDNWIGANATILKGVTIGEGAVVAAGAVVTKNIPAYSIWGGVPAERIGMRFNDE CEEEEECCCEECCCCEEEEEEEECCCCEEEECEEEECCCCCEEECCCCCHHHHCCEECCH TLSIHKELMKKAGFPG HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: 0.20 {glucose} 0.11 {maltose}
Km value (mM): 62 {glucose}} 90 {maltose}} 0.018 {acetyl-CoA}} 40 {triethanolamine}} [C]
Substrates: Acetyl-CoA; maltose [C]
Specific reaction: Acetyl-CoA + maltose = CoA + acetylmaltose [C]
General reaction: Acyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8257133 [H]