Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858176

Identifier: 85858176

GI number: 85858176

Start: 329158

End: 329925

Strand: Direct

Name: 85858176

Synonym: SYN_01605

Alternate gene names: NA

Gene position: 329158-329925 (Clockwise)

Preceding gene: 85858174

Following gene: 85858177

Centisome position: 10.35

GC content: 42.84

Gene sequence:

>768_bases
ATGAATATTCGCATACTGGGCTGTCATGGATCACAGGTTCCCGGTTGTAATACAACGAGTTTCCTGGTGGAAGAAAATGT
GCTGATTGATGCCGGTTCAATAACTTCAACGCTGACTGCGGAGGAACAGGTAAAAGTTGATTATATTTTTGTCACACACG
CTCATTTGGATCATGTCAAGGAAATGATGTTCATGGTGGATAATCTGTGGTACCTACAGAAGTCCAATCCTCTGACAATC
GTCAGCATAGAGCCGGTCATCCATGCTTTAAAGACCCATCTGTTCAATGGGCTGATCTGGCCGGATTTTTCTTCCTTGCC
GAATGCGGAAAATCCTGTGTTGAGGTATGAAATTCTTGAGGTCGGCGGGAAAAGAAATATAGGCTCCTTCGCGGTCACAG
CCATATCTGTAAACCATACGGTGGAAACCGTTTCTTATGTAATAGAAACAGGCCAGGGATCCATGATCTTTATCGGAGAC
ACAGGGCCGACAGAAGAGATATGGAAAGTTGCGAACTCGATAGAAGATTTGAAAGCCATCTTTGTGGAAACATCTCTTCC
CGATGAAATGAATCATATTGCCGAAATGACCGGTCATTTAACTCCTGCCATGCTGATGAAGGAGTTGTTTAAACTCAATA
ATAAAAATCTGGATATCTATCTCTATCATATGAAGGATTTTTATTCGAAATTAATAACTCGCCAGGTTGCAGCCATGAAT
CAGAACAGGCTCCACATTTTGGAGGACGGTCAGACTGTCCGTATTTAG

Upstream 100 bases:

>100_bases
TTCTGCCGATGGATGTTGGCGTGCAACAAAGCGCCCGGATCGTGCTGTCAAAGAAAAATCCCGGCGATAAAACAGAGAAG
AAGAGAAAGGGCCAGATTGG

Downstream 100 bases:

>100_bases
CAGGATGATGTCCTTCTCTTAAGATTTTTCGACCTCAGGCAGTCTTGGACGGGATCGATTACGGAATTTCAGGGAGTCGG
CCTGAAGGTTCTGCGAAGAA

Product: metallo-beta-lactamase superfamily protein

Products: NA

Alternate protein names: Cyclic-AMP Phosphodiesterase; Metal Dependent Phosphohydrolase; CAMP Phosphodiesterase; Beta-Lactamase Domain-Containing Protein; 3 5'-Cyclic-Nucleotide Phosphodiesterase; CAMP Phosphodiesterase Class-II; Beta-Lactamase-Like; Camp Phosphodiesterases Class-Ii; Metallo-Beta-Lactamase; Response Regulator; Cyclic-AMP Phosphodiesterase Class-II; CAMP Phosphodiesterase-Like Protein; GAF Domain Protein; Beta-Lactamase-Like Protein; CAMP Phosphodiesterases Class-II; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase Superfamily Metal-Dependent Hydrolase

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MNIRILGCHGSQVPGCNTTSFLVEENVLIDAGSITSTLTAEEQVKVDYIFVTHAHLDHVKEMMFMVDNLWYLQKSNPLTI
VSIEPVIHALKTHLFNGLIWPDFSSLPNAENPVLRYEILEVGGKRNIGSFAVTAISVNHTVETVSYVIETGQGSMIFIGD
TGPTEEIWKVANSIEDLKAIFVETSLPDEMNHIAEMTGHLTPAMLMKELFKLNNKNLDIYLYHMKDFYSKLITRQVAAMN
QNRLHILEDGQTVRI

Sequences:

>Translated_255_residues
MNIRILGCHGSQVPGCNTTSFLVEENVLIDAGSITSTLTAEEQVKVDYIFVTHAHLDHVKEMMFMVDNLWYLQKSNPLTI
VSIEPVIHALKTHLFNGLIWPDFSSLPNAENPVLRYEILEVGGKRNIGSFAVTAISVNHTVETVSYVIETGQGSMIFIGD
TGPTEEIWKVANSIEDLKAIFVETSLPDEMNHIAEMTGHLTPAMLMKELFKLNNKNLDIYLYHMKDFYSKLITRQVAAMN
QNRLHILEDGQTVRI
>Mature_255_residues
MNIRILGCHGSQVPGCNTTSFLVEENVLIDAGSITSTLTAEEQVKVDYIFVTHAHLDHVKEMMFMVDNLWYLQKSNPLTI
VSIEPVIHALKTHLFNGLIWPDFSSLPNAENPVLRYEILEVGGKRNIGSFAVTAISVNHTVETVSYVIETGQGSMIFIGD
TGPTEEIWKVANSIEDLKAIFVETSLPDEMNHIAEMTGHLTPAMLMKELFKLNNKNLDIYLYHMKDFYSKLITRQVAAMN
QNRLHILEDGQTVRI

Specific function: Unknown

COG id: COG5212

COG function: function code T; Low-affinity cAMP phosphodiesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28717; Mature: 28717

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRILGCHGSQVPGCNTTSFLVEENVLIDAGSITSTLTAEEQVKVDYIFVTHAHLDHVK
CCEEEEECCCCCCCCCCCEEEEEECCEEEECCCCCEEECCCCCEEEEEEEEECHHHHHHH
EMMFMVDNLWYLQKSNPLTIVSIEPVIHALKTHLFNGLIWPDFSSLPNAENPVLRYEILE
HHHHHHHHEEEEECCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEE
VGGKRNIGSFAVTAISVNHTVETVSYVIETGQGSMIFIGDTGPTEEIWKVANSIEDLKAI
CCCCCCCCCEEEEEEEECHHHHHHHHHEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHE
FVETSLPDEMNHIAEMTGHLTPAMLMKELFKLNNKNLDIYLYHMKDFYSKLITRQVAAMN
EEECCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHCC
QNRLHILEDGQTVRI
CCCEEEEECCCEECC
>Mature Secondary Structure
MNIRILGCHGSQVPGCNTTSFLVEENVLIDAGSITSTLTAEEQVKVDYIFVTHAHLDHVK
CCEEEEECCCCCCCCCCCEEEEEECCEEEECCCCCEEECCCCCEEEEEEEEECHHHHHHH
EMMFMVDNLWYLQKSNPLTIVSIEPVIHALKTHLFNGLIWPDFSSLPNAENPVLRYEILE
HHHHHHHHEEEEECCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEE
VGGKRNIGSFAVTAISVNHTVETVSYVIETGQGSMIFIGDTGPTEEIWKVANSIEDLKAI
CCCCCCCCCEEEEEEEECHHHHHHHHHEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHE
FVETSLPDEMNHIAEMTGHLTPAMLMKELFKLNNKNLDIYLYHMKDFYSKLITRQVAAMN
EEECCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHCC
QNRLHILEDGQTVRI
CCCEEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA