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The map label for this gene is infA

Identifier: 85858169

GI number: 85858169

Start: 324959

End: 325177

Strand: Direct

Name: infA

Synonym: SYN_01597

Alternate gene names: 85858169

Gene position: 324959-325177 (Clockwise)

Preceding gene: 85858168

Following gene: 85858170

Centisome position: 10.22

GC content: 41.55

Gene sequence:

>219_bases
ATGGCCAAAGAAGAACCCATAGAAGTAGAAGGCCGAGTAATTGAGCCACTGCCCAATGCAATGTTCAGAGTGGAATTAGA
AAATGGTCATCGGGTACTGGCACATATCTCAGGAAAAATGAGGATGCATTTTATTAAAATATTGCCTGGCGATAAAGTTA
CGGTGGAATTGTCGCCCTATGATCTCACACGAGGTAGAATTATTTACAGGACAAAGTAG

Upstream 100 bases:

>100_bases
AAATACAGTTGAACGATCCAGAGGATCATAAGAAATTATTGCTAAAAGGATCTGCATTCATATTGAATCAAAGTAAGCAA
AAGAAATATCAGGTAGGTTT

Downstream 100 bases:

>100_bases
GATAACTGAAAATAGTTAAAGTTGTGAGTAAAGCTTAATTATAAACGCTTAATTGTAAAAATAGAGGCAGAGGAGTGAAA
TTGTGAAAGTACGGTCATCA

Product: protein translation initiation factor 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MAKEEPIEVEGRVIEPLPNAMFRVELENGHRVLAHISGKMRMHFIKILPGDKVTVELSPYDLTRGRIIYRTK

Sequences:

>Translated_72_residues
MAKEEPIEVEGRVIEPLPNAMFRVELENGHRVLAHISGKMRMHFIKILPGDKVTVELSPYDLTRGRIIYRTK
>Mature_71_residues
AKEEPIEVEGRVIEPLPNAMFRVELENGHRVLAHISGKMRMHFIKILPGDKVTVELSPYDLTRGRIIYRTK

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain

Homologues:

Organism=Escherichia coli, GI1787110, Length=72, Percent_Identity=69.4444444444444, Blast_Score=112, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IF1_SYNAS (Q2LQB5)

Other databases:

- EMBL:   CP000252
- RefSeq:   YP_460371.1
- ProteinModelPortal:   Q2LQB5
- SMR:   Q2LQB5
- STRING:   Q2LQB5
- GeneID:   3884803
- GenomeReviews:   CP000252_GR
- KEGG:   sat:SYN_01597
- eggNOG:   COG0361
- HOGENOM:   HBG286099
- OMA:   KMRMHFI
- PhylomeDB:   Q2LQB5
- BioCyc:   SACI56780:SYN_01597-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00075
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368
- Gene3D:   G3DSA:2.40.50.140
- SMART:   SM00316
- TIGRFAMs:   TIGR00008

Pfam domain/function: PF01176 eIF-1a; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 8328; Mature: 8197

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEEPIEVEGRVIEPLPNAMFRVELENGHRVLAHISGKMRMHFIKILPGDKVTVELSPY
CCCCCCEEECCEEECCCCCEEEEEEECCCCEEEEEECCCEEEEEEEECCCCEEEEEECCC
DLTRGRIIYRTK
CCCCCEEEEEEC
>Mature Secondary Structure 
AKEEPIEVEGRVIEPLPNAMFRVELENGHRVLAHISGKMRMHFIKILPGDKVTVELSPY
CCCCCEEECCEEECCCCCEEEEEEECCCCEEEEEECCCEEEEEEEECCCCEEEEEECCC
DLTRGRIIYRTK
CCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA