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The map label for this gene is secY

Identifier: 85858167

GI number: 85858167

Start: 322750

End: 324057

Strand: Direct

Name: secY

Synonym: SYN_01595

Alternate gene names: 85858167

Gene position: 322750-324057 (Clockwise)

Preceding gene: 85858166

Following gene: 85858168

Centisome position: 10.15

GC content: 45.41

Gene sequence:

>1308_bases
TTGATAGAAGGCCTGAAGAACATTAATAAGATTCCGGAATTGCAAAAGAGAATACTTTATTCTCTTTTGATGTTGGGCGT
GTATCGCGTCGGAGCGCATATTCCAACTCCAGGAATTGATACAGCGGCCTTAATGGCATATTTTGAACAGGCTAAAGGGT
CTTTGTTGGGCCTCTTTGACATGTTCGCAGGAGGGGCGCTGAGTAACCTGTCCGTGTTCGCACTCGGGATCATGCCTTAC
ATCAGTGCGTCAATCATCCTTCAACTGCTTACTGTAGCTGTGCCTCATCTGGAAAGGCTATCAAAAGAAGGGGAGGCAGG
AAGAAGAAAAATAACGCAGTATACCCGTTACGGGACCATCGTACTCAGCATAATACAAGGTTTCGGAATATCAGTCGGAT
TGGAAAACATGGCAGGTCCGACGGGAGTATCCATTGTTATGCAACCGGGTTGGGGATTTCGATTAATGACCGTCCTGACC
CTGACGGCAGGCACGGCCTTTTTAATGTGGCTTGGGGAACAGATCACTGAAAAGGGAATTGGAAACGGAATATCCTTAAT
TATCTTTGCTGGAATTGTATGCCGAGGACCGGAAGCCATAATCAACACCTTTAGACTTTTATCAACAGGAGAGATGGGTT
TTTTCCTGATCATTATTCTCATCGCCATGATGATCACCGTTATAGGTGTTATTGTATTTGTAGAGAGCGGACAGAGACGG
ATTCCTGTTCAATATGCGAAAAGGGTTGTTGGAAGGAAGGTCTATGGAGGGCAGTCAACCCACCTGCCTCTGAAGGTCAA
TACAGCCGGTGTCATTCCGCCGATATTCGCGTCATCGATAATCATGTTTCCAGCTACGATTGCTAACTTTGTACCGCACC
CTTGGATGAAGGTCGTAGCGGATGCGTTGGTTCCGGGAAGAATAGGTTATGAAGTATTATATGTAGGATTTATCGTCTTT
TTTTGTTATTTTTACACAGCGGTGACGTTTAACCCGAATGATGTAGCTGAAAATATGAGGAAATATGGCGGATACGTTCC
GGGAATAAGGCCGGGAAAAAAGACGGCTGAATATATAGACGATGTCTTGACCCGACTGACATTCAGCGGTGCGATATATG
TTTCAGCAGTTTGCGTTCTGCCGAGTATTCTCATAGCCTATTTTAATGTGCCGTTCTACTTTGGAGGGACGGCGTTACTG
ATCGTAGTAGGGGTTGCACTGGATACGGCGGGGCAGTTGGAAACACATCTTCTGACACGACAATATGAGGGATTTCTAAA
GAAAGGCAAGATTGCAAGAAGAAGATGA

Upstream 100 bases:

>100_bases
GAAATTGACCATCCGCTGACTGTAAAAATCAAAATGATCAGTCAGGGAGCAAAAGCGAAAATTGAAGCTGCAGGCGGATC
GGTCATCGAGGTAGTCTGAT

Downstream 100 bases:

>100_bases
AGAGACCTGCCTTTTCCAGAAACAGATAAAATGGTTATTTTAAAGAGACCTGAAGAAATAGAAAAAATTCGAAAGAGCAG
CCGGATCGTAGCGGAAATAC

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MIEGLKNINKIPELQKRILYSLLMLGVYRVGAHIPTPGIDTAALMAYFEQAKGSLLGLFDMFAGGALSNLSVFALGIMPY
ISASIILQLLTVAVPHLERLSKEGEAGRRKITQYTRYGTIVLSIIQGFGISVGLENMAGPTGVSIVMQPGWGFRLMTVLT
LTAGTAFLMWLGEQITEKGIGNGISLIIFAGIVCRGPEAIINTFRLLSTGEMGFFLIIILIAMMITVIGVIVFVESGQRR
IPVQYAKRVVGRKVYGGQSTHLPLKVNTAGVIPPIFASSIIMFPATIANFVPHPWMKVVADALVPGRIGYEVLYVGFIVF
FCYFYTAVTFNPNDVAENMRKYGGYVPGIRPGKKTAEYIDDVLTRLTFSGAIYVSAVCVLPSILIAYFNVPFYFGGTALL
IVVGVALDTAGQLETHLLTRQYEGFLKKGKIARRR

Sequences:

>Translated_435_residues
MIEGLKNINKIPELQKRILYSLLMLGVYRVGAHIPTPGIDTAALMAYFEQAKGSLLGLFDMFAGGALSNLSVFALGIMPY
ISASIILQLLTVAVPHLERLSKEGEAGRRKITQYTRYGTIVLSIIQGFGISVGLENMAGPTGVSIVMQPGWGFRLMTVLT
LTAGTAFLMWLGEQITEKGIGNGISLIIFAGIVCRGPEAIINTFRLLSTGEMGFFLIIILIAMMITVIGVIVFVESGQRR
IPVQYAKRVVGRKVYGGQSTHLPLKVNTAGVIPPIFASSIIMFPATIANFVPHPWMKVVADALVPGRIGYEVLYVGFIVF
FCYFYTAVTFNPNDVAENMRKYGGYVPGIRPGKKTAEYIDDVLTRLTFSGAIYVSAVCVLPSILIAYFNVPFYFGGTALL
IVVGVALDTAGQLETHLLTRQYEGFLKKGKIARRR
>Mature_435_residues
MIEGLKNINKIPELQKRILYSLLMLGVYRVGAHIPTPGIDTAALMAYFEQAKGSLLGLFDMFAGGALSNLSVFALGIMPY
ISASIILQLLTVAVPHLERLSKEGEAGRRKITQYTRYGTIVLSIIQGFGISVGLENMAGPTGVSIVMQPGWGFRLMTVLT
LTAGTAFLMWLGEQITEKGIGNGISLIIFAGIVCRGPEAIINTFRLLSTGEMGFFLIIILIAMMITVIGVIVFVESGQRR
IPVQYAKRVVGRKVYGGQSTHLPLKVNTAGVIPPIFASSIIMFPATIANFVPHPWMKVVADALVPGRIGYEVLYVGFIVF
FCYFYTAVTFNPNDVAENMRKYGGYVPGIRPGKKTAEYIDDVLTRLTFSGAIYVSAVCVLPSILIAYFNVPFYFGGTALL
IVVGVALDTAGQLETHLLTRQYEGFLKKGKIARRR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=423, Percent_Identity=54.3735224586288, Blast_Score=422, Evalue=1e-119,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47429; Mature: 47429

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEGLKNINKIPELQKRILYSLLMLGVYRVGAHIPTPGIDTAALMAYFEQAKGSLLGLFD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
MFAGGALSNLSVFALGIMPYISASIILQLLTVAVPHLERLSKEGEAGRRKITQYTRYGTI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VLSIIQGFGISVGLENMAGPTGVSIVMQPGWGFRLMTVLTLTAGTAFLMWLGEQITEKGI
HHHHHHHCCCEECHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GNGISLIIFAGIVCRGPEAIINTFRLLSTGEMGFFLIIILIAMMITVIGVIVFVESGQRR
CCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IPVQYAKRVVGRKVYGGQSTHLPLKVNTAGVIPPIFASSIIMFPATIANFVPHPWMKVVA
CCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
DALVPGRIGYEVLYVGFIVFFCYFYTAVTFNPNDVAENMRKYGGYVPGIRPGKKTAEYID
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
DVLTRLTFSGAIYVSAVCVLPSILIAYFNVPFYFGGTALLIVVGVALDTAGQLETHLLTR
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCHHHHHHHHHH
QYEGFLKKGKIARRR
HHHHHHHCCCCCCCC
>Mature Secondary Structure
MIEGLKNINKIPELQKRILYSLLMLGVYRVGAHIPTPGIDTAALMAYFEQAKGSLLGLFD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
MFAGGALSNLSVFALGIMPYISASIILQLLTVAVPHLERLSKEGEAGRRKITQYTRYGTI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VLSIIQGFGISVGLENMAGPTGVSIVMQPGWGFRLMTVLTLTAGTAFLMWLGEQITEKGI
HHHHHHHCCCEECHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GNGISLIIFAGIVCRGPEAIINTFRLLSTGEMGFFLIIILIAMMITVIGVIVFVESGQRR
CCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IPVQYAKRVVGRKVYGGQSTHLPLKVNTAGVIPPIFASSIIMFPATIANFVPHPWMKVVA
CCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
DALVPGRIGYEVLYVGFIVFFCYFYTAVTFNPNDVAENMRKYGGYVPGIRPGKKTAEYID
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
DVLTRLTFSGAIYVSAVCVLPSILIAYFNVPFYFGGTALLIVVGVALDTAGQLETHLLTR
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCHHHHHHHHHH
QYEGFLKKGKIARRR
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]