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The map label for this gene is yubM [H]

Identifier: 85375753

GI number: 85375753

Start: 2947348

End: 2949321

Strand: Direct

Name: yubM [H]

Synonym: ELI_14630

Alternate gene names: 85375753

Gene position: 2947348-2949321 (Clockwise)

Preceding gene: 85375752

Following gene: 85375756

Centisome position: 96.56

GC content: 62.61

Gene sequence:

>1974_bases
ATGATCCAGTCGATTCCCTTGAAAAAGCTTGTCCCGAGTCCGCGCAATGTTCGCAAGTCGAGCGACGTGCTGGCCGACCT
CCAGCTGCGGGCAGACATTGCTGCGCGCGGCCTCCTGCAGAACCTCGTCGTGCGCAAAGGAAAGCGCGGCAAGTTCGAGG
TCGAGGCCGGTGGTCGCCGTCTCGCCGCGCTGCAGGCGCTGGCCGAAGAGGGCACGCTACCAAAGGACCACCAGGTCACC
TGCCTTGTCATCGAAGGCGAGGAAAGCGAAGTGCGTGAAGCCAGTCTTGCCGAGAACTTCCAGCGTCTCGCGATGAACCC
CGCCGACGAGGCGCAGGCCTTCGCTTCCATCATCGAGGCGGGGGCTACCCCCGAAGACGTGGCGCGCCGCTTTGGCCTCA
CAGTCCGTTTCGTCGAAGGGCGCCTGCGTTTGGCAAGCCTCGCACCGTGCGTCTTTGAAGCGCTCGCTGAAGGCACGATC
ACGCTCGACATGGCCAAGGCCTACGGCGCGATTTCTGACGTGGAGCGGCAGGCTCATGTCTATTCCGAGCTGCAGGACGC
CTGGTACCAGATCACGCCTGACACGATCCGCCGGATGGTGCTCGATGCCACGGTGCGAGGTTCCGATCCGCGAGCGGTTC
TTGTCGGACGCGATGCCTACCTCGCTGCAGGAGGCCGGATCGAGCGCGAACTGTTCGACGATGATGCCAGCGAGAGCTGG
ATCGATGTCGCGCTTCTCGAAGACCTCGCGCACAAGGCCATGGAAGAAGCGGCTTCTAAGAGTGCACTCGAATATGGCCT
TGCCTGGGTTCGGCCAACCCTTGGCAACTACGTCAGCCATGACCTTGTTGAAGGTCTCCGTCGCTTGCCCTGCGAGCCTG
CACCAATGACCGAACAGGAAGCACAGGAATTTGGCGATCTCGAAGCCGACTACGACCGTATCGCTGCTGTGCTCGAAGAC
GAGGACAGCGACGAGGACGAGATCGCGAGCGCTGAGAAAAAGCTGGTCATCATTGATCGCGCAATGCGCGATCTCAATGA
CCGCCCCCCAGTGCTTGCCGAAGAGCTGAAAGCTGAGGCTGGCGCCTTCCTCGTACTCTCGCGCAATGGCGAACCGACAC
TGGTCCCGCAGTTCTATACCGAGACCGAGGTCATCGCTGACGAAGGCGTTGTCGAAGCCGTCGAGGACAGCGGAGCGGCA
AAGTCCAAAGGGAATTCGCTGTCGCAGCGCCTTCTCGACGAGCTTGCTATGCAGCGCCGCGACATTCTGGCGATCCATCT
CGCCAACGATCCGGCACTGGCGCTCGACTTCATGGTCTTCACGCTTGCGGATGCCGATGGGCATGACTGGCGCGCCAATA
AGGCATCGACGCTCGTTGGATCGGTCGCATCCGGCCCGGTCAACGGGTTCGAGGCCAAGGATGCACCGGCGAGCGCTGCT
CTGGCCGAGCTTGCCGGGTCGCTCGATGAAAGCTGGCGCTCGGGTGAAACCGACGTCGAACGGTTCGCCAAGTTTCGGGC
GCTTTCTGACGAGGCGCGCTCGGCCTGGCTCGGCCACGTCGTCTCCCGCTCACTCGTTGCCAGTCTTGCTTGCGAAGGCG
AACGCTCGGTGCCGCTGCACGAAGCGCTCGGCTCCCTCCTCGAAATCGAGACCGCGCATTGGTGGCGCCCCACGGCTGCA
AACTACTTCGACCGCGTGGCAAAGGCTCGCACGCTCGAAGCGCTCGATGCTGCGGGTGGTCCCGAACTGGTCAGTCGCTA
CGCTGCATCGAAGAAGACTGAGCTTGCGAGCGCTGCCGAGCGTATCTTCACCGGCAACTTTATCGGTGAGGCTGACATCA
AGGAGCGAGCACAGGCTTGGGTGCCTGCGATCATGCGGTTCGACGGCGCCGACGAAGTCGAACCGGTTGCGGCCGATGCC
AATGAGCCGGTCAGCGACGAAGCGAGTGACGAAATTGCCGAGCAGGCTGCCTGA

Upstream 100 bases:

>100_bases
TCGGGCAGACCCCAATCTCAGAATGAGAGTGGAGGGAGCCCTTTGGGCTTGTGGGCCTCGTGATCCTCACCTGCGCCTTC
ATTCCATCAGGAGAACACCC

Downstream 100 bases:

>100_bases
CCCCTCCTGACAGGCCCAGGTCACTCGGCGGGCGGTCCGTCCTTATCGGGACGGATCGCCCTTTTTCATGTCACACTCGG
GCCGTTAGGCGACTGTCCGC

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 657; Mature: 657

Protein sequence:

>657_residues
MIQSIPLKKLVPSPRNVRKSSDVLADLQLRADIAARGLLQNLVVRKGKRGKFEVEAGGRRLAALQALAEEGTLPKDHQVT
CLVIEGEESEVREASLAENFQRLAMNPADEAQAFASIIEAGATPEDVARRFGLTVRFVEGRLRLASLAPCVFEALAEGTI
TLDMAKAYGAISDVERQAHVYSELQDAWYQITPDTIRRMVLDATVRGSDPRAVLVGRDAYLAAGGRIERELFDDDASESW
IDVALLEDLAHKAMEEAASKSALEYGLAWVRPTLGNYVSHDLVEGLRRLPCEPAPMTEQEAQEFGDLEADYDRIAAVLED
EDSDEDEIASAEKKLVIIDRAMRDLNDRPPVLAEELKAEAGAFLVLSRNGEPTLVPQFYTETEVIADEGVVEAVEDSGAA
KSKGNSLSQRLLDELAMQRRDILAIHLANDPALALDFMVFTLADADGHDWRANKASTLVGSVASGPVNGFEAKDAPASAA
LAELAGSLDESWRSGETDVERFAKFRALSDEARSAWLGHVVSRSLVASLACEGERSVPLHEALGSLLEIETAHWWRPTAA
NYFDRVAKARTLEALDAAGGPELVSRYAASKKTELASAAERIFTGNFIGEADIKERAQAWVPAIMRFDGADEVEPVAADA
NEPVSDEASDEIAEQAA

Sequences:

>Translated_657_residues
MIQSIPLKKLVPSPRNVRKSSDVLADLQLRADIAARGLLQNLVVRKGKRGKFEVEAGGRRLAALQALAEEGTLPKDHQVT
CLVIEGEESEVREASLAENFQRLAMNPADEAQAFASIIEAGATPEDVARRFGLTVRFVEGRLRLASLAPCVFEALAEGTI
TLDMAKAYGAISDVERQAHVYSELQDAWYQITPDTIRRMVLDATVRGSDPRAVLVGRDAYLAAGGRIERELFDDDASESW
IDVALLEDLAHKAMEEAASKSALEYGLAWVRPTLGNYVSHDLVEGLRRLPCEPAPMTEQEAQEFGDLEADYDRIAAVLED
EDSDEDEIASAEKKLVIIDRAMRDLNDRPPVLAEELKAEAGAFLVLSRNGEPTLVPQFYTETEVIADEGVVEAVEDSGAA
KSKGNSLSQRLLDELAMQRRDILAIHLANDPALALDFMVFTLADADGHDWRANKASTLVGSVASGPVNGFEAKDAPASAA
LAELAGSLDESWRSGETDVERFAKFRALSDEARSAWLGHVVSRSLVASLACEGERSVPLHEALGSLLEIETAHWWRPTAA
NYFDRVAKARTLEALDAAGGPELVSRYAASKKTELASAAERIFTGNFIGEADIKERAQAWVPAIMRFDGADEVEPVAADA
NEPVSDEASDEIAEQAA
>Mature_657_residues
MIQSIPLKKLVPSPRNVRKSSDVLADLQLRADIAARGLLQNLVVRKGKRGKFEVEAGGRRLAALQALAEEGTLPKDHQVT
CLVIEGEESEVREASLAENFQRLAMNPADEAQAFASIIEAGATPEDVARRFGLTVRFVEGRLRLASLAPCVFEALAEGTI
TLDMAKAYGAISDVERQAHVYSELQDAWYQITPDTIRRMVLDATVRGSDPRAVLVGRDAYLAAGGRIERELFDDDASESW
IDVALLEDLAHKAMEEAASKSALEYGLAWVRPTLGNYVSHDLVEGLRRLPCEPAPMTEQEAQEFGDLEADYDRIAAVLED
EDSDEDEIASAEKKLVIIDRAMRDLNDRPPVLAEELKAEAGAFLVLSRNGEPTLVPQFYTETEVIADEGVVEAVEDSGAA
KSKGNSLSQRLLDELAMQRRDILAIHLANDPALALDFMVFTLADADGHDWRANKASTLVGSVASGPVNGFEAKDAPASAA
LAELAGSLDESWRSGETDVERFAKFRALSDEARSAWLGHVVSRSLVASLACEGERSVPLHEALGSLLEIETAHWWRPTAA
NYFDRVAKARTLEALDAAGGPELVSRYAASKKTELASAAERIFTGNFIGEADIKERAQAWVPAIMRFDGADEVEPVAADA
NEPVSDEASDEIAEQAA

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 71299; Mature: 71299

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQSIPLKKLVPSPRNVRKSSDVLADLQLRADIAARGLLQNLVVRKGKRGKFEVEAGGRR
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHH
LAALQALAEEGTLPKDHQVTCLVIEGEESEVREASLAENFQRLAMNPADEAQAFASIIEA
HHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GATPEDVARRFGLTVRFVEGRLRLASLAPCVFEALAEGTITLDMAKAYGAISDVERQAHV
CCCHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHH
YSELQDAWYQITPDTIRRMVLDATVRGSDPRAVLVGRDAYLAAGGRIERELFDDDASESW
HHHHHHHHEECCHHHHHHHHHHHHCCCCCCCEEEEECCHHEECCCCHHHHHHCCCCCCHH
IDVALLEDLAHKAMEEAASKSALEYGLAWVRPTLGNYVSHDLVEGLRRLPCEPAPMTEQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
AQEFGDLEADYDRIAAVLEDEDSDEDEIASAEKKLVIIDRAMRDLNDRPPVLAEELKAEA
HHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCEEEHHHHHHCCCCCCCHHHHHHHHCC
GAFLVLSRNGEPTLVPQFYTETEVIADEGVVEAVEDSGAAKSKGNSLSQRLLDELAMQRR
CEEEEEECCCCCCCCCCHHCCHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
DILAIHLANDPALALDFMVFTLADADGHDWRANKASTLVGSVASGPVNGFEAKDAPASAA
CEEEEEECCCCHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
LAELAGSLDESWRSGETDVERFAKFRALSDEARSAWLGHVVSRSLVASLACEGERSVPLH
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
EALGSLLEIETAHWWRPTAANYFDRVAKARTLEALDAAGGPELVSRYAASKKTELASAAE
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RIFTGNFIGEADIKERAQAWVPAIMRFDGADEVEPVAADANEPVSDEASDEIAEQAA
HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MIQSIPLKKLVPSPRNVRKSSDVLADLQLRADIAARGLLQNLVVRKGKRGKFEVEAGGRR
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHH
LAALQALAEEGTLPKDHQVTCLVIEGEESEVREASLAENFQRLAMNPADEAQAFASIIEA
HHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GATPEDVARRFGLTVRFVEGRLRLASLAPCVFEALAEGTITLDMAKAYGAISDVERQAHV
CCCHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHH
YSELQDAWYQITPDTIRRMVLDATVRGSDPRAVLVGRDAYLAAGGRIERELFDDDASESW
HHHHHHHHEECCHHHHHHHHHHHHCCCCCCCEEEEECCHHEECCCCHHHHHHCCCCCCHH
IDVALLEDLAHKAMEEAASKSALEYGLAWVRPTLGNYVSHDLVEGLRRLPCEPAPMTEQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
AQEFGDLEADYDRIAAVLEDEDSDEDEIASAEKKLVIIDRAMRDLNDRPPVLAEELKAEA
HHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCEEEHHHHHHCCCCCCCHHHHHHHHCC
GAFLVLSRNGEPTLVPQFYTETEVIADEGVVEAVEDSGAAKSKGNSLSQRLLDELAMQRR
CEEEEEECCCCCCCCCCHHCCHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
DILAIHLANDPALALDFMVFTLADADGHDWRANKASTLVGSVASGPVNGFEAKDAPASAA
CEEEEEECCCCHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
LAELAGSLDESWRSGETDVERFAKFRALSDEARSAWLGHVVSRSLVASLACEGERSVPLH
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
EALGSLLEIETAHWWRPTAANYFDRVAKARTLEALDAAGGPELVSRYAASKKTELASAAE
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RIFTGNFIGEADIKERAQAWVPAIMRFDGADEVEPVAADANEPVSDEASDEIAEQAA
HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]