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The map label for this gene is oppA [C]

Identifier: 85375653

GI number: 85375653

Start: 2838134

End: 2839597

Strand: Direct

Name: oppA [C]

Synonym: ELI_14130

Alternate gene names: 85375653

Gene position: 2838134-2839597 (Clockwise)

Preceding gene: 85375652

Following gene: 85375654

Centisome position: 92.98

GC content: 64.75

Gene sequence:

>1464_bases
ATGCGTTCGCTGCTTTCTGCCATTCTGCTTGTCGTGCTTGCGGTGCCCGCGTGCTCGGGTCGCAGCGACGACGGCACGAT
CGCGCTGGCCGTGGTGGGCAGTGAAGAATCGATGTTCGATTCCAGCTTGCGACTGTCGTTCGCCGGGCAGCTCGTCAGGG
AGGCAACGGCCGAGGGGCTTGTCGCGCTCGATGCCCAGGGGGAAATAATTCCGGGGATCGCAGAACGCTGGATCGTTACC
GACGATGGGCTGAGTTTCATCTTTCGCGTCAGGAATTCCGACTGGTCGAACGGCGAGCCCATCGATGCCGAATCCGTCCG
CCGGAGCCTGCTGGCCACGATTGATGCGTTGGACGGCACTTCCCTAGGCATCGATTTGGAGAAAATCGATGAGATTCGCG
CTATGACCGCGCGCGTGATCGAGATCCGGCTGAAGAGCCCGATGCCCGAATTCCTGCAATTGCTGGCGCAGCCGGAACTA
GGGCTGCGGCTCGACGGACGGGCCGCAGGGCTGATGCGCTTGCAGCGCGTCGACGATCGGGCGGTGTTGACGCCCGTGCC
GCCGGAGGAGCGCGGCCTGCCCGCGCGACCGGAATGGTCCGAGGATGCCCTCACTATCTCGCTCCGCGCCATGTCGGCCG
GCGCCGCGGTCGAAGCCTTTAGAAATGCGGAGGTCGAGGCTGTGCTCAACGGCAGGCTGTCGACGCTTCCGCTGGCCGAT
CTCGGGCCGCTGTCGCGCGGCACTATCCGGCTGGACGCAGCGCTCGGCCTGTTCGGGCTGACATTCAACAATGCCGACGG
TTTGCTCGCGGAAGCCTCGCGTCGCGAAGCGCTGTCGATGGCTATCGACAGGCCTGCATTGCTCGCACCCTTCAATGTCG
CCGGCTGGATACCGACCACGCGGATCGTCGCGCCCGACCTGCCGCGCGATCCGGGTGCGCTTGGGGAGCGCTGGAGCGGA
CAGTCACTGGAAGAGCGCCGGGCCGAGGCAAGGCGCCGGATCGCCGATTATTCGGGTGAGGGGACAGTGCGCCTTACGAT
CTTTCTGCCCGATGGACCGGGCTCCGAGCTTCTGCTGCAGCAGCTGGCAGCGGATTTTTCGACCATTGGCGTGCGGCTGG
AGCGCGCCGACCTGCGTTCGCAGGCAGACCTCGAACTGGTCGACCGGCTGGCGCGCTATGCCAATGCGCGCTGGTTCCTG
AACCAGTTCAATTGCGCAGTTGCCCAGCCGATATGCTCACCCGATGCCGATGTGCTGGTCGACCAGTCGCTGGACGCTGC
GACCGCGCAGGAGCAAACCAATCTGCTTGTGGAAGCCGAAAGCGCTCTGACGGCCGCGGAAGCCTACATCCCGCTCGGTG
CGCCGATTCGCTGGTCTCTCGTTCGCGGGGGACTCGAGGGTTATTCGGAGAATCGCTGGGGGCGTCACCCCTTGTTTCCC
ATCGCCACCGCGCCCATATTTTAA

Upstream 100 bases:

>100_bases
GCCCGGCCGGTTTGCAGCCTGGCGGAAGCGATCCGTCCCGCTTGCGAAAAATCTGATAGCTGGCGCTGACCCTGCACGAT
TTGGCTGCTAGGCAGCAGCC

Downstream 100 bases:

>100_bases
GAAAAGGAGGCTTGAATATGAACGAGGGTCCGCGCGTGCAGGCGATGGGGTTCGAAATGCCGACCGGCAATGATCCGGTT
TCGATCCGGAAGCGTATCGA

Product: putative dipeptide-binding ABC transporter protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Oligopeptide ABC Transporter Periplasmic Protein; Oligopeptide Transporter Subunit

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MRSLLSAILLVVLAVPACSGRSDDGTIALAVVGSEESMFDSSLRLSFAGQLVREATAEGLVALDAQGEIIPGIAERWIVT
DDGLSFIFRVRNSDWSNGEPIDAESVRRSLLATIDALDGTSLGIDLEKIDEIRAMTARVIEIRLKSPMPEFLQLLAQPEL
GLRLDGRAAGLMRLQRVDDRAVLTPVPPEERGLPARPEWSEDALTISLRAMSAGAAVEAFRNAEVEAVLNGRLSTLPLAD
LGPLSRGTIRLDAALGLFGLTFNNADGLLAEASRREALSMAIDRPALLAPFNVAGWIPTTRIVAPDLPRDPGALGERWSG
QSLEERRAEARRRIADYSGEGTVRLTIFLPDGPGSELLLQQLAADFSTIGVRLERADLRSQADLELVDRLARYANARWFL
NQFNCAVAQPICSPDADVLVDQSLDAATAQEQTNLLVEAESALTAAEAYIPLGAPIRWSLVRGGLEGYSENRWGRHPLFP
IATAPIF

Sequences:

>Translated_487_residues
MRSLLSAILLVVLAVPACSGRSDDGTIALAVVGSEESMFDSSLRLSFAGQLVREATAEGLVALDAQGEIIPGIAERWIVT
DDGLSFIFRVRNSDWSNGEPIDAESVRRSLLATIDALDGTSLGIDLEKIDEIRAMTARVIEIRLKSPMPEFLQLLAQPEL
GLRLDGRAAGLMRLQRVDDRAVLTPVPPEERGLPARPEWSEDALTISLRAMSAGAAVEAFRNAEVEAVLNGRLSTLPLAD
LGPLSRGTIRLDAALGLFGLTFNNADGLLAEASRREALSMAIDRPALLAPFNVAGWIPTTRIVAPDLPRDPGALGERWSG
QSLEERRAEARRRIADYSGEGTVRLTIFLPDGPGSELLLQQLAADFSTIGVRLERADLRSQADLELVDRLARYANARWFL
NQFNCAVAQPICSPDADVLVDQSLDAATAQEQTNLLVEAESALTAAEAYIPLGAPIRWSLVRGGLEGYSENRWGRHPLFP
IATAPIF
>Mature_487_residues
MRSLLSAILLVVLAVPACSGRSDDGTIALAVVGSEESMFDSSLRLSFAGQLVREATAEGLVALDAQGEIIPGIAERWIVT
DDGLSFIFRVRNSDWSNGEPIDAESVRRSLLATIDALDGTSLGIDLEKIDEIRAMTARVIEIRLKSPMPEFLQLLAQPEL
GLRLDGRAAGLMRLQRVDDRAVLTPVPPEERGLPARPEWSEDALTISLRAMSAGAAVEAFRNAEVEAVLNGRLSTLPLAD
LGPLSRGTIRLDAALGLFGLTFNNADGLLAEASRREALSMAIDRPALLAPFNVAGWIPTTRIVAPDLPRDPGALGERWSG
QSLEERRAEARRRIADYSGEGTVRLTIFLPDGPGSELLLQQLAADFSTIGVRLERADLRSQADLELVDRLARYANARWFL
NQFNCAVAQPICSPDADVLVDQSLDAATAQEQTNLLVEAESALTAAEAYIPLGAPIRWSLVRGGLEGYSENRWGRHPLFP
IATAPIF

Specific function: This Protein Is A Component Of The Oligopeptide Permease, A Binding Protein-Dependent Transport System, It Binds Peptides Up To Five Amino Acids Long With High Affinity. [C]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52656; Mature: 52656

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLLSAILLVVLAVPACSGRSDDGTIALAVVGSEESMFDSSLRLSFAGQLVREATAEGL
CHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCE
VALDAQGEIIPGIAERWIVTDDGLSFIFRVRNSDWSNGEPIDAESVRRSLLATIDALDGT
EEECCCCCCCCCCHHCEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCC
SLGIDLEKIDEIRAMTARVIEIRLKSPMPEFLQLLAQPELGLRLDGRAAGLMRLQRVDDR
CCCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHCCCCCCEEECCCHHHHHHHHHCCCC
AVLTPVPPEERGLPARPEWSEDALTISLRAMSAGAAVEAFRNAEVEAVLNGRLSTLPLAD
EEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHCCCEEEEECCCCCCCCCCC
LGPLSRGTIRLDAALGLFGLTFNNADGLLAEASRREALSMAIDRPALLAPFNVAGWIPTT
CCCCCCCCEEEEEHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCC
RIVAPDLPRDPGALGERWSGQSLEERRAEARRRIADYSGEGTVRLTIFLPDGPGSELLLQ
EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHH
QLAADFSTIGVRLERADLRSQADLELVDRLARYANARWFLNQFNCAVAQPICSPDADVLV
HHHHHHHHHCEEEEHHHCCCCCCHHHHHHHHHHHCCHHHHHHCCHHHHCCCCCCCCCEEE
DQSLDAATAQEQTNLLVEAESALTAAEAYIPLGAPIRWSLVRGGLEGYSENRWGRHPLFP
ECCCCHHHHHHHCCEEEEEHHHHHHHHHEECCCCCEEHHHHHCCCCCCCCCCCCCCCCCC
IATAPIF
CCCCCCC
>Mature Secondary Structure
MRSLLSAILLVVLAVPACSGRSDDGTIALAVVGSEESMFDSSLRLSFAGQLVREATAEGL
CHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCE
VALDAQGEIIPGIAERWIVTDDGLSFIFRVRNSDWSNGEPIDAESVRRSLLATIDALDGT
EEECCCCCCCCCCHHCEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCC
SLGIDLEKIDEIRAMTARVIEIRLKSPMPEFLQLLAQPELGLRLDGRAAGLMRLQRVDDR
CCCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHCCCCCCEEECCCHHHHHHHHHCCCC
AVLTPVPPEERGLPARPEWSEDALTISLRAMSAGAAVEAFRNAEVEAVLNGRLSTLPLAD
EEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHCCCEEEEECCCCCCCCCCC
LGPLSRGTIRLDAALGLFGLTFNNADGLLAEASRREALSMAIDRPALLAPFNVAGWIPTT
CCCCCCCCEEEEEHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCC
RIVAPDLPRDPGALGERWSGQSLEERRAEARRRIADYSGEGTVRLTIFLPDGPGSELLLQ
EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHH
QLAADFSTIGVRLERADLRSQADLELVDRLARYANARWFLNQFNCAVAQPICSPDADVLV
HHHHHHHHHCEEEEHHHCCCCCCHHHHHHHHHHHCCHHHHHHCCHHHHCCCCCCCCCEEE
DQSLDAATAQEQTNLLVEAESALTAAEAYIPLGAPIRWSLVRGGLEGYSENRWGRHPLFP
ECCCCHHHHHHHCCEEEEEHHHHHHHHHEECCCCCEEHHHHHCCCCCCCCCCCCCCCCCC
IATAPIF
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA