Click here to switch to the map view.

The map label for this gene is ydiK [C]

Identifier: 85375175

GI number: 85375175

Start: 2364831

End: 2365913

Strand: Direct

Name: ydiK [C]

Synonym: ELI_11740

Alternate gene names: 85375175

Gene position: 2364831-2365913 (Clockwise)

Preceding gene: 85375174

Following gene: 85375176

Centisome position: 77.47

GC content: 63.9

Gene sequence:

>1083_bases
GTGAAGGATCACAAGGAACTCGACCAGGGGATCGAACTGGGCGGCTTCCTGCTGTTCCTGGCGCTGGTCACGATCGGTCT
GGTGCTGGTCATCTGGCCCTTCGTGATGCCGATCCTGTGGTCGGCGCTCGCGGCGATCCTGTTCCAGCCGCTCTACCAGC
GCATCCTCGGCAATCTGAACGGCAAGGCCAACCAGGCGGCGATAGCAACGCTCCTCATCATCTTCTTCGCCGTCCTGTTG
CCGATGATCTGGATCGGCAGCGCCATCGTGCGTCAGGCGGCCAATGTCGTCATCGCTTTCCAGGAAGGACGGATCGACGT
TGCGACCCTCGTAGGACAGATTTTCGACGCGCTGCCGTCAAATCTGCGCAATATGCTGGACGCGCAGGGCTGGGGCGATT
TTGCCGACTTGCAGGCCCGCACACAGGAATTGCTGACCCAGTCTGCCGGTCTGATTGCGCAGCAGGCGCTCGTTATCGGC
GGCGGCGCGCTGGGCTATGTGCTGGCCTTCGGGGTCGGGCTCTACATCACCTATTTCCTGCTCCGCGACGGCAAGGGCAT
CGGCCAAGCCGTGATGGAAGGCGTGCCGCTGCAGAAGGACGTAGCCGAAAGACTGGCGGACAAGTTCCTCAACATCGTGC
GCGCGACGATCAAGGGATCGGTCGTGGTCGGCATCGTCCAGGGGGCGTTGGGCGCGCTGACCTTCTGGATCGTCGGGCTG
CCTTCGGTGCTGCTGTTCGGTCTCGTTATGGCGGTGTTCTCGCTGCTTCCCGCGATCGGCCCCGCCATCGTCTGGGTCCC
GGCAGCGATCTGGCTGTTCGCCACCGGAGCGATCTGGCAAGGCATCGTGGTGGTCGTCTCCGGCGTGGCGGTGATCGGCA
TGGCGGACAACCTGCTCCGCCCGATCTTGGTCGGCCGCGATACCGGCATTCCCGACTGGATCATTCTCGTCACGACGCTG
GGCGGCATCGCGACCATGGGCCTCTCCGGCATCGTGCTCGGGCCCATGCTCGCAGGCCTGTTCCTCGCCGGGTGGACGAT
CCTGCGCGAACACAACGAAGCTGTCGACGCGAACGCGGAATAA

Upstream 100 bases:

>100_bases
TCATCGCTCTGGCGGCGGGGATGATCGGGGCAAGTCTGGTTTATGCTTTGTCGGAGAAACGCTTCCCGCGCCGGTGGGAT
GCGGGCTTCGGGGGCACGCG

Downstream 100 bases:

>100_bases
GTGAGTTACGACGCGATCATCCTCGGCGGCGGCGCGGCCGGCCTGTTCTGCGCGGCCATCGCAGGCCAGCGCGGCAAGCG
CGTGCTGGTGCTGGAGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKDHKELDQGIELGGFLLFLALVTIGLVLVIWPFVMPILWSALAAILFQPLYQRILGNLNGKANQAAIATLLIIFFAVLL
PMIWIGSAIVRQAANVVIAFQEGRIDVATLVGQIFDALPSNLRNMLDAQGWGDFADLQARTQELLTQSAGLIAQQALVIG
GGALGYVLAFGVGLYITYFLLRDGKGIGQAVMEGVPLQKDVAERLADKFLNIVRATIKGSVVVGIVQGALGALTFWIVGL
PSVLLFGLVMAVFSLLPAIGPAIVWVPAAIWLFATGAIWQGIVVVVSGVAVIGMADNLLRPILVGRDTGIPDWIILVTTL
GGIATMGLSGIVLGPMLAGLFLAGWTILREHNEAVDANAE

Sequences:

>Translated_360_residues
MKDHKELDQGIELGGFLLFLALVTIGLVLVIWPFVMPILWSALAAILFQPLYQRILGNLNGKANQAAIATLLIIFFAVLL
PMIWIGSAIVRQAANVVIAFQEGRIDVATLVGQIFDALPSNLRNMLDAQGWGDFADLQARTQELLTQSAGLIAQQALVIG
GGALGYVLAFGVGLYITYFLLRDGKGIGQAVMEGVPLQKDVAERLADKFLNIVRATIKGSVVVGIVQGALGALTFWIVGL
PSVLLFGLVMAVFSLLPAIGPAIVWVPAAIWLFATGAIWQGIVVVVSGVAVIGMADNLLRPILVGRDTGIPDWIILVTTL
GGIATMGLSGIVLGPMLAGLFLAGWTILREHNEAVDANAE
>Mature_360_residues
MKDHKELDQGIELGGFLLFLALVTIGLVLVIWPFVMPILWSALAAILFQPLYQRILGNLNGKANQAAIATLLIIFFAVLL
PMIWIGSAIVRQAANVVIAFQEGRIDVATLVGQIFDALPSNLRNMLDAQGWGDFADLQARTQELLTQSAGLIAQQALVIG
GGALGYVLAFGVGLYITYFLLRDGKGIGQAVMEGVPLQKDVAERLADKFLNIVRATIKGSVVVGIVQGALGALTFWIVGL
PSVLLFGLVMAVFSLLPAIGPAIVWVPAAIWLFATGAIWQGIVVVVSGVAVIGMADNLLRPILVGRDTGIPDWIILVTTL
GGIATMGLSGIVLGPMLAGLFLAGWTILREHNEAVDANAE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=331, Percent_Identity=25.3776435045317, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38149; Mature: 38149

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDHKELDQGIELGGFLLFLALVTIGLVLVIWPFVMPILWSALAAILFQPLYQRILGNLN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GKANQAAIATLLIIFFAVLLPMIWIGSAIVRQAANVVIAFQEGRIDVATLVGQIFDALPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHH
NLRNMLDAQGWGDFADLQARTQELLTQSAGLIAQQALVIGGGALGYVLAFGVGLYITYFL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LRDGKGIGQAVMEGVPLQKDVAERLADKFLNIVRATIKGSVVVGIVQGALGALTFWIVGL
HHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
PSVLLFGLVMAVFSLLPAIGPAIVWVPAAIWLFATGAIWQGIVVVVSGVAVIGMADNLLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PILVGRDTGIPDWIILVTTLGGIATMGLSGIVLGPMLAGLFLAGWTILREHNEAVDANAE
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKDHKELDQGIELGGFLLFLALVTIGLVLVIWPFVMPILWSALAAILFQPLYQRILGNLN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GKANQAAIATLLIIFFAVLLPMIWIGSAIVRQAANVVIAFQEGRIDVATLVGQIFDALPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHH
NLRNMLDAQGWGDFADLQARTQELLTQSAGLIAQQALVIGGGALGYVLAFGVGLYITYFL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LRDGKGIGQAVMEGVPLQKDVAERLADKFLNIVRATIKGSVVVGIVQGALGALTFWIVGL
HHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
PSVLLFGLVMAVFSLLPAIGPAIVWVPAAIWLFATGAIWQGIVVVVSGVAVIGMADNLLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PILVGRDTGIPDWIILVTTLGGIATMGLSGIVLGPMLAGLFLAGWTILREHNEAVDANAE
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]