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The map label for this gene is comM [H]

Identifier: 85375004

GI number: 85375004

Start: 2206152

End: 2206811

Strand: Direct

Name: comM [H]

Synonym: ELI_10885

Alternate gene names: 85375004

Gene position: 2206152-2206811 (Clockwise)

Preceding gene: 85375002

Following gene: 85375006

Centisome position: 72.28

GC content: 69.85

Gene sequence:

>660_bases
GTGAAGCCGGGCGAGGTCTCTCTCGCGCATCTTGGCGTGCTGTTCCTCGACGAATTGCCAGAATTCCAGCGCGCCGTGCT
CGACAGCCTGCGCCAGCCGATCGAGACCGGCCAGGTCGATGTCGCCCGCGCCAATGCGCATGTGACCTTTCCCGCGCGGG
TGCAGCTGGTGGCGGCGATGAACCCGTGCCGCTGCGGGCACCTCGGCGATCCCGCGCTCGCCTGCAGCCGCGCCCCCAAA
TGCGCCATCGACTATCAGGCCAAGATCAGCGGGCCGATGCTCGACCGGATCGACCTGCACGTAGAGGTCGACCCCGTCAG
CGCCGCCGACCTGGCCCTGCCCCCGCCCGCCGAAGGCTCGGCCGAGGTCGCCGCAAGGGTCGCCCAAGCCCGCGCCCGCC
AGACCGCGCGTTTTGAGCAGACCGGCGCGCGCACCAATGCGGAACTGGATGGCGAGGCGCTGGAGACCTTCGCCACGCCC
GACGAGGCAGGCCGCAAGCTCCTCATGCAAGCCGCCGAAGCGATGCGCCTGTCCGCCCGCGCCTACACGCGGATGCTGCG
AGTGGCGCGAACAATTGCCGATCTGGCGGGAATGGAGCGGGTGGGGCGCATCCATGTGGCTGAGGCGCTGAGCTATAGAC
GGCAGGCGCCTAGGGCTTAG

Upstream 100 bases:

>100_bases
CCGGCGAAATGGACGCGCCGTCTCACAAAAGGGCTCGAATTGGGGCAAAACGCACCCGCCTGAGTCGCATCATTAGTGGA
AGTTATCAGGCGGCCTCAAG

Downstream 100 bases:

>100_bases
ATCAAACCACTGAAGTAAGGAGTATTAAAATGAGAGCTTTGAGACTTGGACTGATTTGCATGGCTGCATTCGGTGTAGCG
GCATCTGGTTCACATCAAAT

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKPGEVSLAHLGVLFLDELPEFQRAVLDSLRQPIETGQVDVARANAHVTFPARVQLVAAMNPCRCGHLGDPALACSRAPK
CAIDYQAKISGPMLDRIDLHVEVDPVSAADLALPPPAEGSAEVAARVAQARARQTARFEQTGARTNAELDGEALETFATP
DEAGRKLLMQAAEAMRLSARAYTRMLRVARTIADLAGMERVGRIHVAEALSYRRQAPRA

Sequences:

>Translated_219_residues
MKPGEVSLAHLGVLFLDELPEFQRAVLDSLRQPIETGQVDVARANAHVTFPARVQLVAAMNPCRCGHLGDPALACSRAPK
CAIDYQAKISGPMLDRIDLHVEVDPVSAADLALPPPAEGSAEVAARVAQARARQTARFEQTGARTNAELDGEALETFATP
DEAGRKLLMQAAEAMRLSARAYTRMLRVARTIADLAGMERVGRIHVAEALSYRRQAPRA
>Mature_219_residues
MKPGEVSLAHLGVLFLDELPEFQRAVLDSLRQPIETGQVDVARANAHVTFPARVQLVAAMNPCRCGHLGDPALACSRAPK
CAIDYQAKISGPMLDRIDLHVEVDPVSAADLALPPPAEGSAEVAARVAQARARQTARFEQTGARTNAELDGEALETFATP
DEAGRKLLMQAAEAMRLSARAYTRMLRVARTIADLAGMERVGRIHVAEALSYRRQAPRA

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=220, Percent_Identity=44.0909090909091, Blast_Score=166, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 23626; Mature: 23626

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPGEVSLAHLGVLFLDELPEFQRAVLDSLRQPIETGQVDVARANAHVTFPARVQLVAAM
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCEEEECHHHEEEEECC
NPCRCGHLGDPALACSRAPKCAIDYQAKISGPMLDRIDLHVEVDPVSAADLALPPPAEGS
CCCCCCCCCCHHHHHCCCCCCEECCHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCH
AEVAARVAQARARQTARFEQTGARTNAELDGEALETFATPDEAGRKLLMQAAEAMRLSAR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AYTRMLRVARTIADLAGMERVGRIHVAEALSYRRQAPRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKPGEVSLAHLGVLFLDELPEFQRAVLDSLRQPIETGQVDVARANAHVTFPARVQLVAAM
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCEEEECHHHEEEEECC
NPCRCGHLGDPALACSRAPKCAIDYQAKISGPMLDRIDLHVEVDPVSAADLALPPPAEGS
CCCCCCCCCCHHHHHCCCCCCEECCHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCH
AEVAARVAQARARQTARFEQTGARTNAELDGEALETFATPDEAGRKLLMQAAEAMRLSAR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AYTRMLRVARTIADLAGMERVGRIHVAEALSYRRQAPRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]