Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
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Accession | NC_007722 |
Length | 3,052,398 |
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The map label for this gene is foxA [H]
Identifier: 85374974
GI number: 85374974
Start: 2176546
End: 2177595
Strand: Direct
Name: foxA [H]
Synonym: ELI_10735
Alternate gene names: 85374974
Gene position: 2176546-2177595 (Clockwise)
Preceding gene: 85374973
Following gene: 85374975
Centisome position: 71.31
GC content: 55.71
Gene sequence:
>1050_bases TTGTTGTGCTCGGGAACAGCATTTGCCCAGGAAGCAACGCCCCAGGCGAACGACCAAACCGGGAGCGCCACGGAAGCGCT GGCTGAGGACATTGTCGTTACCGCCACCAAAAAGGGCTATGGCGAAAGCGTGCAGAAAGTACCGATGGCGGTCACGGCTT TTGGTGAAGCGCAGCTGGATGCCAAGTTCGTCCAGAATCTTCAAAGTCTGAGCTACGACGTTCCCAACGTCCAGCTCGAG GATGTGGGTACGGCACCGGGCTATGCCAATTTCACTATCCGGGGCCTCGGCATCAACAGCACGATCCCATCGATCGACCC CACCGTAGGCGTTTTCACTGACGGTATTTACCTCGGCATCAACGCTGGTGTCGTGCTGGACAACTTCGACCTTGAGGGGA TCGAAGTTCTGCGTGGACCGCAAGGCTTGCTTTTCGGTCGCAACGTTACCGGCGGTGCCGTGGTTGTGCGGACCACGCGG CCCAGCTTCGATTTTGGAGCCAAAGCCAAGCTATCCATTGAAACGGGACTGAAAAAGACCGTAAGCGGCACGGTTACCGG ACCTATCGTCGATGACGTTTTGGCTGCCAAATTGGCCGTCTACTACAGCGACGACAATGGCTGGTTTCGCAACCGCTTCG ACAATCGCAGCTTCGGTAAATCACATGACCTTATCATTCGCCCGGCACTTTCGCTCAAGGGTGGCGACCGCTTCCGAATG GATCTCCGCTATGAGCATGGCGATGTCGAAAGCGATGGAGCCCCTGTCCAGAGTCACGCGCTGTTTCCCGCGACAGCTTC AGGTTTTCGATCAATTTCCCAGGTTTCTATGATGCCAAATGGGACCAGGCGATCGTGGAAACCAACATCGATGTCGGTCT GGGCGAAGGCGTCTTCACCAACATCGCTGGCTATCGGAAATTCCGATCCTCCGCGGGCGCTGATATCGATGGAACACCAC AGTCCTTCTTTCATGCCTTTTTCGAAATCGACCAGGATCAACTCAGCGACGAACTTCGTTATGCCGGAAGGTTCGGTGAC GTCGAATTGA
Upstream 100 bases:
>100_bases GGACGACGGCCCTCAAATGCCGCCAAACGGCATGAACTACACAATATCTCCTGGGAAGAGAGGATCAGCCATGAGAGGAT GTCTATTGGCTTCTGCCGCG
Downstream 100 bases:
>100_bases CAACCGGTCTATACTATTTTTCCCAGGATCTTCGTTACGCCGAGCTGCGGAATCTTTTGGGCGGTGCTCGGATCGTTTCC GGTGGGGGTACGCAAGACCA
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MLCSGTAFAQEATPQANDQTGSATEALAEDIVVTATKKGYGESVQKVPMAVTAFGEAQLDAKFVQNLQSLSYDVPNVQLE DVGTAPGYANFTIRGLGINSTIPSIDPTVGVFTDGIYLGINAGVVLDNFDLEGIEVLRGPQGLLFGRNVTGGAVVVRTTR PSFDFGAKAKLSIETGLKKTVSGTVTGPIVDDVLAAKLAVYYSDDNGWFRNRFDNRSFGKSHDLIIRPALSLKGGDRFRM DLRYEHGDVESDGAPVQSHALFPATASGFRSISQVSMMPNGTRRSWKPTSMSVWAKASSPTSLAIGNSDPPRALISMEHH SPSFMPFSKSTRINSATNFVMPEGSVTSN
Sequences:
>Translated_349_residues MLCSGTAFAQEATPQANDQTGSATEALAEDIVVTATKKGYGESVQKVPMAVTAFGEAQLDAKFVQNLQSLSYDVPNVQLE DVGTAPGYANFTIRGLGINSTIPSIDPTVGVFTDGIYLGINAGVVLDNFDLEGIEVLRGPQGLLFGRNVTGGAVVVRTTR PSFDFGAKAKLSIETGLKKTVSGTVTGPIVDDVLAAKLAVYYSDDNGWFRNRFDNRSFGKSHDLIIRPALSLKGGDRFRM DLRYEHGDVESDGAPVQSHALFPATASGFRSISQVSMMPNGTRRSWKPTSMSVWAKASSPTSLAIGNSDPPRALISMEHH SPSFMPFSKSTRINSATNFVMPEGSVTSN >Mature_349_residues MLCSGTAFAQEATPQANDQTGSATEALAEDIVVTATKKGYGESVQKVPMAVTAFGEAQLDAKFVQNLQSLSYDVPNVQLE DVGTAPGYANFTIRGLGINSTIPSIDPTVGVFTDGIYLGINAGVVLDNFDLEGIEVLRGPQGLLFGRNVTGGAVVVRTTR PSFDFGAKAKLSIETGLKKTVSGTVTGPIVDDVLAAKLAVYYSDDNGWFRNRFDNRSFGKSHDLIIRPALSLKGGDRFRM DLRYEHGDVESDGAPVQSHALFPATASGFRSISQVSMMPNGTRRSWKPTSMSVWAKASSPTSLAIGNSDPPRALISMEHH SPSFMPFSKSTRINSATNFVMPEGSVTSN
Specific function: Ferrioxamine binding and uptake, in association with the tonB protein. May play a role in intestinal colonization [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 37224; Mature: 37224
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCSGTAFAQEATPQANDQTGSATEALAEDIVVTATKKGYGESVQKVPMAVTAFGEAQLD CCCCCCCCHHCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCCHHHHCCEEEEECCCHHHH AKFVQNLQSLSYDVPNVQLEDVGTAPGYANFTIRGLGINSTIPSIDPTVGVFTDGIYLGI HHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCEEEEE NAGVVLDNFDLEGIEVLRGPQGLLFGRNVTGGAVVVRTTRPSFDFGAKAKLSIETGLKKT ECCEEEECCCCCCEEEEECCCCEEEECCCCCCEEEEEECCCCCCCCCEEEEEHHHCCHHH VSGTVTGPIVDDVLAAKLAVYYSDDNGWFRNRFDNRSFGKSHDLIIRPALSLKGGDRFRM HCCCCCCHHHHHHHHEEEEEEEECCCCHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEE DLRYEHGDVESDGAPVQSHALFPATASGFRSISQVSMMPNGTRRSWKPTSMSVWAKASSP EEEECCCCCCCCCCCCHHCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCC TSLAIGNSDPPRALISMEHHSPSFMPFSKSTRINSATNFVMPEGSVTSN CEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCC >Mature Secondary Structure MLCSGTAFAQEATPQANDQTGSATEALAEDIVVTATKKGYGESVQKVPMAVTAFGEAQLD CCCCCCCCHHCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCCHHHHCCEEEEECCCHHHH AKFVQNLQSLSYDVPNVQLEDVGTAPGYANFTIRGLGINSTIPSIDPTVGVFTDGIYLGI HHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCEEEEE NAGVVLDNFDLEGIEVLRGPQGLLFGRNVTGGAVVVRTTRPSFDFGAKAKLSIETGLKKT ECCEEEECCCCCCEEEEECCCCEEEECCCCCCEEEEEECCCCCCCCCEEEEEHHHCCHHH VSGTVTGPIVDDVLAAKLAVYYSDDNGWFRNRFDNRSFGKSHDLIIRPALSLKGGDRFRM HCCCCCCHHHHHHHHEEEEEEEECCCCHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEE DLRYEHGDVESDGAPVQSHALFPATASGFRSISQVSMMPNGTRRSWKPTSMSVWAKASSP EEEECCCCCCCCCCCCHHCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCC TSLAIGNSDPPRALISMEHHSPSFMPFSKSTRINSATNFVMPEGSVTSN CEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11677609; 10103258; 7642488 [H]