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The map label for this gene is rnpA

Identifier: 85374956

GI number: 85374956

Start: 2156314

End: 2156679

Strand: Reverse

Name: rnpA

Synonym: ELI_10645

Alternate gene names: 85374956

Gene position: 2156679-2156314 (Counterclockwise)

Preceding gene: 85374957

Following gene: 85374955

Centisome position: 70.66

GC content: 65.03

Gene sequence:

>366_bases
GTGACCGACAAACCCGCCGTCATCCGCAAGCGCGCCGATTTCCTCGCGGCGAATCGCGGGCTTCGAGTCGCCCGGCCGGG
CTTCGTCCTTTTGGCGCACCCTAACCAGGGACAAGGCCAGCGCTACGGCATCACCGTCACGAAGAAGATCGGCAATGCCG
TCGTCCGCAACCGGATGAAACGGCGATTTCGCGAGCTGCTGTGGGAGCTGCTCCCACAGCAGGGACTCGCCGATCACGAT
CACATCCTGATCGGACGCGAAGGTGGGATCGAGCGGGATTTTGGCAAGCTGCGTGAGGAGCTTATGTTGGCGCTTCGGCG
GGCGCGCGAAGGCAAGGGCGATCCGCGTCGCAGGCGCAGGCGCTAG

Upstream 100 bases:

>100_bases
GCGATTGGGGCCGCAAGGACCCCTTGAGCGAGGAAACCGCACCCCGAATGGGGTGCGAAACACACAGACTCTTTCTGATC
TTGGCGCTAGACCTGCGACC

Downstream 100 bases:

>100_bases
CCGCGCCCCGTTCGTATCGAGCGCAGGCGCCGAGCTTGTCGAGGAGCCGTAGTCGAGATAGCGCCAGGCGATGTCTCGAC
AGCGATTCTCGGCTGAGCTC

Product: ribonuclease P protein component

Products: NA

Alternate protein names: RNase P protein; RNaseP protein; Protein C5

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MTDKPAVIRKRADFLAANRGLRVARPGFVLLAHPNQGQGQRYGITVTKKIGNAVVRNRMKRRFRELLWELLPQQGLADHD
HILIGREGGIERDFGKLREELMLALRRAREGKGDPRRRRRR

Sequences:

>Translated_121_residues
MTDKPAVIRKRADFLAANRGLRVARPGFVLLAHPNQGQGQRYGITVTKKIGNAVVRNRMKRRFRELLWELLPQQGLADHD
HILIGREGGIERDFGKLREELMLALRRAREGKGDPRRRRRR
>Mature_120_residues
TDKPAVIRKRADFLAANRGLRVARPGFVLLAHPNQGQGQRYGITVTKKIGNAVVRNRMKRRFRELLWELLPQQGLADHDH
ILIGREGGIERDFGKLREELMLALRRAREGKGDPRRRRRR

Specific function: RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-lead

COG id: COG0594

COG function: function code J; RNase P protein component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnpA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNPA_ERYLH (Q2N7X0)

Other databases:

- EMBL:   CP000157
- RefSeq:   YP_459018.1
- ProteinModelPortal:   Q2N7X0
- SMR:   Q2N7X0
- STRING:   Q2N7X0
- GeneID:   3868917
- GenomeReviews:   CP000157_GR
- KEGG:   eli:ELI_10645
- NMPDR:   fig|314225.3.peg.898
- eggNOG:   NOG124661
- HOGENOM:   HBG728160
- OMA:   HILIGRE
- ProtClustDB:   CLSK844060
- BioCyc:   ELIT314225:ELI_10645-MONOMER
- HAMAP:   MF_00227
- InterPro:   IPR020568
- InterPro:   IPR014721
- InterPro:   IPR000100
- Gene3D:   G3DSA:3.30.230.10
- ProDom:   PD003629
- TIGRFAMs:   TIGR00188

Pfam domain/function: PF00825 Ribonuclease_P; SSF54211 Ribosomal_S5_D2-typ_fold

EC number: =3.1.26.5

Molecular weight: Translated: 14042; Mature: 13911

Theoretical pI: Translated: 12.25; Mature: 12.25

Prosite motif: PS00648 RIBONUCLEASE_P

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKPAVIRKRADFLAANRGLRVARPGFVLLAHPNQGQGQRYGITVTKKIGNAVVRNRMK
CCCCCHHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCCCEECEEHHHHHHHHHHHHHHH
RRFRELLWELLPQQGLADHDHILIGREGGIERDFGKLREELMLALRRAREGKGDPRRRRR
HHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCC
R
C
>Mature Secondary Structure 
TDKPAVIRKRADFLAANRGLRVARPGFVLLAHPNQGQGQRYGITVTKKIGNAVVRNRMK
CCCCHHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCCCEECEEHHHHHHHHHHHHHHH
RRFRELLWELLPQQGLADHDHILIGREGGIERDFGKLREELMLALRRAREGKGDPRRRRR
HHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA