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The map label for this gene is secB [H]

Identifier: 85374927

GI number: 85374927

Start: 2129784

End: 2130368

Strand: Direct

Name: secB [H]

Synonym: ELI_10500

Alternate gene names: 85374927

Gene position: 2129784-2130368 (Clockwise)

Preceding gene: 85374923

Following gene: 85374928

Centisome position: 69.77

GC content: 61.71

Gene sequence:

>585_bases
ATGGGTTGCCTCACCTATTCACGCAAGACAGACGAAAGACGTATCATCATGGCCGACGAAGGCGACGTTCTCACCGATCT
CGACATGGATCCGGCAGCTGGCGGCAACGGCGCGGACAACCGCCCCACCGCCGGTTTCATCACCCAGTATATCAAGGACA
TGTCGGTCGAAAACCCGAACGCGCCGGGCGTCTACCAGTGGCAGGAACAGCCGCAGATCGACCTGCAGTTCAATATCGGC
GCCAATGCCGTGAACGAGGAAGTCACCGAGGTCGAGCTCAAGATCAATGTCGAAGCCAAGACCGACCAGGGCGCGCTCTA
CATCATCGAGCTCGTCTATGCCGGGCTCGTCGGCATCCGCAATCTGGGCGACGACCAGGCGCATATGTTCGTCTATGCCG
AAGCGCCGCGGATCCTGTTCCCCTTCGCGCGCCGCGTCATTGCCGATGCCACGCGGGACTTGGGTTTCCAGCCGCTGATG
CTCGACCCGATCGACTTCAACGGCCTCTACATGCAGCGCCTGCAGCAGAAAGCCGCCGAAGAAGCGCAAGGCGAAGGCGG
CGAAACGCCTGCCGGCGACGCCTAG

Upstream 100 bases:

>100_bases
ACACGGAGCCGGTCCTTCGATCCAGCCGGTTCGTCGCAACCCGTCCAGCGGCGTTGCGGCAAGCCCCGCACGGTGCTAGG
CGCGCGCCCTGACACGGCAC

Downstream 100 bases:

>100_bases
GCCCGATGCGCCTGCGGGCCTGACGCCATGAGCCTGCTCAAGAATGTCGGAACGATCGGCGGGCTAACGATGGTCAGCCG
CATCGCCGGGATGGCGCGCG

Product: preprotein translocase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MGCLTYSRKTDERRIIMADEGDVLTDLDMDPAAGGNGADNRPTAGFITQYIKDMSVENPNAPGVYQWQEQPQIDLQFNIG
ANAVNEEVTEVELKINVEAKTDQGALYIIELVYAGLVGIRNLGDDQAHMFVYAEAPRILFPFARRVIADATRDLGFQPLM
LDPIDFNGLYMQRLQQKAAEEAQGEGGETPAGDA

Sequences:

>Translated_194_residues
MGCLTYSRKTDERRIIMADEGDVLTDLDMDPAAGGNGADNRPTAGFITQYIKDMSVENPNAPGVYQWQEQPQIDLQFNIG
ANAVNEEVTEVELKINVEAKTDQGALYIIELVYAGLVGIRNLGDDQAHMFVYAEAPRILFPFARRVIADATRDLGFQPLM
LDPIDFNGLYMQRLQQKAAEEAQGEGGETPAGDA
>Mature_193_residues
GCLTYSRKTDERRIIMADEGDVLTDLDMDPAAGGNGADNRPTAGFITQYIKDMSVENPNAPGVYQWQEQPQIDLQFNIGA
NAVNEEVTEVELKINVEAKTDQGALYIIELVYAGLVGIRNLGDDQAHMFVYAEAPRILFPFARRVIADATRDLGFQPLML
DPIDFNGLYMQRLQQKAAEEAQGEGGETPAGDA

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family [H]

Homologues:

Organism=Escherichia coli, GI1790038, Length=139, Percent_Identity=34.5323741007194, Blast_Score=87, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003708 [H]

Pfam domain/function: PF02556 SecB [H]

EC number: NA

Molecular weight: Translated: 21343; Mature: 21212

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCLTYSRKTDERRIIMADEGDVLTDLDMDPAAGGNGADNRPTAGFITQYIKDMSVENPN
CCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
APGVYQWQEQPQIDLQFNIGANAVNEEVTEVELKINVEAKTDQGALYIIELVYAGLVGIR
CCCEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHH
NLGDDQAHMFVYAEAPRILFPFARRVIADATRDLGFQPLMLDPIDFNGLYMQRLQQKAAE
CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHH
EAQGEGGETPAGDA
HHCCCCCCCCCCCC
>Mature Secondary Structure 
GCLTYSRKTDERRIIMADEGDVLTDLDMDPAAGGNGADNRPTAGFITQYIKDMSVENPN
CCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
APGVYQWQEQPQIDLQFNIGANAVNEEVTEVELKINVEAKTDQGALYIIELVYAGLVGIR
CCCEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHH
NLGDDQAHMFVYAEAPRILFPFARRVIADATRDLGFQPLMLDPIDFNGLYMQRLQQKAAE
CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHH
EAQGEGGETPAGDA
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA