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The map label for this gene is phyR [H]

Identifier: 85374870

GI number: 85374870

Start: 2074781

End: 2075581

Strand: Direct

Name: phyR [H]

Synonym: ELI_10215

Alternate gene names: 85374870

Gene position: 2074781-2075581 (Clockwise)

Preceding gene: 85374869

Following gene: 85374872

Centisome position: 67.97

GC content: 60.42

Gene sequence:

>801_bases
ATGTCTGCTTCACAAAAAATCGCTGCCAATCTGCCTTATCTGCGCCGCTATGCACGCGCGCTCACGGGATCCCAGCAGAC
TGGTGACACCTTCGTTCGCGCAACGCTCGAAGCGGCAATCGCCGATGAAAGCCTGAAGCAGGACGTGTCCGAAGGTCGTG
TCCCTCTGTACAAGGCGTTCAACGCGCTTTGGTCCAGCAGCTATCTCGAAGTCGAAGGCGACGATGGCGGCGATGTAGTT
TCGGCCAAGGAAGCTGGGGCTGGCGACCGGCTGAAAGCGGTGACGCCGCTCAACCGGCAGGCATTGCTGCTGACCACGCT
AGAGGATTTCAGCGTCGAAGACGCCGCCGAGATCATGGGTCTCGCTCCCGCCGATGTCGAAGGGCTGGTGCGCGAGGCCG
TCGCAGAGATCGACCGCGAATCGTCGACCAATGTCCTCATTATCGAAGACGAACCGCTGATTTCCATGCAGTTGGAAGAT
CTCGTCCGCAGCCTCGGCCACGACATCGCTGGCACGGCAGCCACGCGGACCCAGGCTCAGGAAGCCGTGGCCAAGGAAAA
GCCCGGATTGGTGCTTGCCGACATTCAGCTCGCAGACGGATCGTCGGGTATCGACGCCGTCGAAGACATTCTCGGACAGT
TCGATGTGCCGGTTATCTTCATCACGGCCTATCCCGAGCGTTTGCTGACGGGGGATCGGCCGGAGCCGACCTATCTCGTG
ACCAAGCCGTTCCAGGAATCGACGGTTCGCACCACCATCAGCCAGGCGCTCTTTTTCCAGAACAGCCCTACGGCCGTTTG
A

Upstream 100 bases:

>100_bases
AAAAAACGTGAAACGGTGAAATTCAGATCAATCCTCGCTAGAGAGGAACCGCATGCAGCGAAGGCCGTTGCACCGACATC
TATTCACGGGAAGGGTCATA

Downstream 100 bases:

>100_bases
GCCGCCAGCCGCTCAGCTTTTCGCCCGGATCGCAAACTCGCTCGGCTGCCGGACCGGCACGAGCAGCGTGCAGCGCACAC
CCTCTGGATCGAATTGAAGA

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MSASQKIAANLPYLRRYARALTGSQQTGDTFVRATLEAAIADESLKQDVSEGRVPLYKAFNALWSSSYLEVEGDDGGDVV
SAKEAGAGDRLKAVTPLNRQALLLTTLEDFSVEDAAEIMGLAPADVEGLVREAVAEIDRESSTNVLIIEDEPLISMQLED
LVRSLGHDIAGTAATRTQAQEAVAKEKPGLVLADIQLADGSSGIDAVEDILGQFDVPVIFITAYPERLLTGDRPEPTYLV
TKPFQESTVRTTISQALFFQNSPTAV

Sequences:

>Translated_266_residues
MSASQKIAANLPYLRRYARALTGSQQTGDTFVRATLEAAIADESLKQDVSEGRVPLYKAFNALWSSSYLEVEGDDGGDVV
SAKEAGAGDRLKAVTPLNRQALLLTTLEDFSVEDAAEIMGLAPADVEGLVREAVAEIDRESSTNVLIIEDEPLISMQLED
LVRSLGHDIAGTAATRTQAQEAVAKEKPGLVLADIQLADGSSGIDAVEDILGQFDVPVIFITAYPERLLTGDRPEPTYLV
TKPFQESTVRTTISQALFFQNSPTAV
>Mature_265_residues
SASQKIAANLPYLRRYARALTGSQQTGDTFVRATLEAAIADESLKQDVSEGRVPLYKAFNALWSSSYLEVEGDDGGDVVS
AKEAGAGDRLKAVTPLNRQALLLTTLEDFSVEDAAEIMGLAPADVEGLVREAVAEIDRESSTNVLIIEDEPLISMQLEDL
VRSLGHDIAGTAATRTQAQEAVAKEKPGLVLADIQLADGSSGIDAVEDILGQFDVPVIFITAYPERLLTGDRPEPTYLVT
KPFQESTVRTTISQALFFQNSPTAV

Specific function: Key regulator for adaptation to epiphytic life (leaf colonizing) of the bacterium. Positively regulates several genes including katE, sodA, hsp20, dps and gloA. However it is not known whether this regulation is direct or indirect. Also induces several de

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR014605
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 28557; Mature: 28426

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASQKIAANLPYLRRYARALTGSQQTGDTFVRATLEAAIADESLKQDVSEGRVPLYKAF
CCCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
NALWSSSYLEVEGDDGGDVVSAKEAGAGDRLKAVTPLNRQALLLTTLEDFSVEDAAEIMG
HHHHCCCEEEEECCCCCCEEECCCCCCCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHC
LAPADVEGLVREAVAEIDRESSTNVLIIEDEPLISMQLEDLVRSLGHDIAGTAATRTQAQ
CCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
EAVAKEKPGLVLADIQLADGSSGIDAVEDILGQFDVPVIFITAYPERLLTGDRPEPTYLV
HHHHHCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCCEEE
TKPFQESTVRTTISQALFFQNSPTAV
ECCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SASQKIAANLPYLRRYARALTGSQQTGDTFVRATLEAAIADESLKQDVSEGRVPLYKAF
CCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
NALWSSSYLEVEGDDGGDVVSAKEAGAGDRLKAVTPLNRQALLLTTLEDFSVEDAAEIMG
HHHHCCCEEEEECCCCCCEEECCCCCCCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHC
LAPADVEGLVREAVAEIDRESSTNVLIIEDEPLISMQLEDLVRSLGHDIAGTAATRTQAQ
CCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
EAVAKEKPGLVLADIQLADGSSGIDAVEDILGQFDVPVIFITAYPERLLTGDRPEPTYLV
HHHHHCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCCEEE
TKPFQESTVRTTISQALFFQNSPTAV
ECCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA