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The map label for this gene is clpS [H]

Identifier: 85374864

GI number: 85374864

Start: 2068707

End: 2069090

Strand: Direct

Name: clpS [H]

Synonym: ELI_10185

Alternate gene names: 85374864

Gene position: 2068707-2069090 (Clockwise)

Preceding gene: 85374863

Following gene: 85374865

Centisome position: 67.77

GC content: 60.42

Gene sequence:

>384_bases
ATGAACGACTTCCCCGACCTTGCCGAAACGATCGACCTGCCCGCGCCGCTGCTGGCAGACGACGATGGTGCCAAGGATGG
CGACAGCGATGCCGATGTCGGGGTCGCGACCAAGACCCGCGCCAAGCCCAAGAAGCCGAGCCAGTACAAGGTGCTGATGC
TGAACGACGATTACACGCCGATGGAATTCGTCGTCATGGTCCTCAAGCGCTTCTTCAAGATGGACCTTGAACAGGCCACC
CGCGTGATGCTGCACGTCCATCAGAAGGGCGTCGGCGTATGCGGGATCTTCCCCTACGAAGTCGCCGAGACCAAGGTAAA
CCAGGTCATGGATTTCGCCCGCCAGAACCAGCATCCGCTACAGTGCACGCTGGAGAAGGCCTGA

Upstream 100 bases:

>100_bases
AACGATCAGTTTTCTTTAACTCCTGCAGCGCATCGTGAGCGAGCGGCAGCGCGTCGCTTCCTCTTGATTGCACGCCGACC
GATACGATATTGCGAGCGCG

Downstream 100 bases:

>100_bases
GCCAACCGGCGCCGGGCTGCGTCCAGTCGCGCGCCGTTCATGCACAACCACCTAACAGGGCATGACCTTGGACGGTTTTG
CCGCTAGAGGGCGGCAACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MNDFPDLAETIDLPAPLLADDDGAKDGDSDADVGVATKTRAKPKKPSQYKVLMLNDDYTPMEFVVMVLKRFFKMDLEQAT
RVMLHVHQKGVGVCGIFPYEVAETKVNQVMDFARQNQHPLQCTLEKA

Sequences:

>Translated_127_residues
MNDFPDLAETIDLPAPLLADDDGAKDGDSDADVGVATKTRAKPKKPSQYKVLMLNDDYTPMEFVVMVLKRFFKMDLEQAT
RVMLHVHQKGVGVCGIFPYEVAETKVNQVMDFARQNQHPLQCTLEKA
>Mature_127_residues
MNDFPDLAETIDLPAPLLADDDGAKDGDSDADVGVATKTRAKPKKPSQYKVLMLNDDYTPMEFVVMVLKRFFKMDLEQAT
RVMLHVHQKGVGVCGIFPYEVAETKVNQVMDFARQNQHPLQCTLEKA

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=105, Percent_Identity=54.2857142857143, Blast_Score=119, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 14244; Mature: 14244

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDFPDLAETIDLPAPLLADDDGAKDGDSDADVGVATKTRAKPKKPSQYKVLMLNDDYTP
CCCCCCHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCH
MEFVVMVLKRFFKMDLEQATRVMLHVHQKGVGVCGIFPYEVAETKVNQVMDFARQNQHPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCC
QCTLEKA
EEEEECC
>Mature Secondary Structure
MNDFPDLAETIDLPAPLLADDDGAKDGDSDADVGVATKTRAKPKKPSQYKVLMLNDDYTP
CCCCCCHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCH
MEFVVMVLKRFFKMDLEQATRVMLHVHQKGVGVCGIFPYEVAETKVNQVMDFARQNQHPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCC
QCTLEKA
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA