Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
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Accession | NC_007722 |
Length | 3,052,398 |
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The map label for this gene is yuxL [H]
Identifier: 85374800
GI number: 85374800
Start: 2002368
End: 2004407
Strand: Direct
Name: yuxL [H]
Synonym: ELI_09865
Alternate gene names: 85374800
Gene position: 2002368-2004407 (Clockwise)
Preceding gene: 85374795
Following gene: 85374801
Centisome position: 65.6
GC content: 64.12
Gene sequence:
>2040_bases ATGAAGACCCTTCGGACTGCCCTGCTTACCGCCACTCTGCTGTTTCCCGCACCCGCGCTGGCCCGCCCGATGACGGCGGA AGATGTCGCCAAGCTCGAGAGCGTCGGCTCTATTGCCGTGTCGCCCGATGGCAGCCGTGTCGCCTACACGACCGCCAGCC TGCCGGACATCCTTGCAGGCGAAGACAACGGCTCGACCACGCAGCAGCTCAAGATCGCTTATGCGCGCGACAATCTGCGC GAATTCCTGCCCGACGACATGAACGTCTCCGGCATCCAGTTTTCGCCCGACGGTCGCTGGATCACTTTCCTGTGGACTAA GGATGACGAAAAGCGCGCCGTTTGGGGCATTCCGGTCGATGGCGGTGCGCATCGCAAGCTTGCCGCGGTCGAGGGTGCGG GCGTGCGCTCCTATAGCTGGGCGCCCGACAGCAGCCATATGCACCTGCTGGTCGGCGCGGCGGAAGACAAGGATCGCGAA GCCGAGAGCAAGGACGGCTTCAACGCCCGCATTTACGAGGAAGAACAGCAGCTCAACCGCCTGTTCCGCGCCATTATCGG TGCAGAGCTGGACCCCGAGCCGCAGGAAGTGACCGTCCCCGGCTACGTCACCTCGTTCCAGATCGCGAAAAACGCCCGTA CCGGCGTGATCGAGACAGCACCGACGACGCTGATCGACGACAGCTACACGCAGAAGAAGGTCAACCTGCTCGACATGCCG ACCGGCAATGTCCGCATGGTGATCGAAACCACCGGCAAGATCGACGATGTCGAGATTTCGCCCGACGCGAGCCAGCTGGC GCTGATCGCCGCAGTGGACATGAACGACCCGGCAGCGACGACCATCCATTTCGTCGACACCGCGACCGGCACGATCCGCG CGCACAATGCCGGCGCGCCCGAGGCCGTCGTCGATGTCGAATACATGCCCGACGGCCGCCTGGTCGCAGCGGTTCATGTC GGCGCGCAAAGTGTGCTGCGCATCCATAATCGCGACGGCTCGCTGCAGCGCGAAGTCGATCCCGGCGCGCTGATTATCAC CGATGTCGAGATCGGCGGCGACCAGATTTTCGTCGAAGCCAATGCGCCGCAGCATCCGGGCGAGCTGTTCAAGCTCGACG GCGACAGCTTCACGCGCTGGACCAGCCACAATCCGTGGCTTGCGGATATCGATTTCGGCGAGCAGCGCACCTTCCGCTTC AATGCCAGCGACGGGCAGGAAGTCGAGGGCGTGCTGGTGCTGCCGGTAGGCGGCGTTCCGCGCGGCGGCGCGCCCCTGAT CATGGATGTCCACGGCGGCCCGGAAGCGCACGATTCCAACGGCTGGACAACCAATTACAGCGGCCCCGGCCAGGTCGCGG CCGGCAAGGGCTATGCCGTGTTCCAGCCGAACTATCGCGGCTCGACCGGCTACGGCACGGCGTTCTCCAAGCAGCACCAA GGGAATTACACCGACCCCGAATTCACCGATCTCGTCGATGCCAAGCGCGCGCTCGTCGCCGAAGGGATCGCCGATGCGGA TCGTGTCGGTGTGACGGGCGGTTCCTATGGCGGGTACGCCACGGCCTGGTCCTCCACCCGCTGGAGCGAGGAATTCGCGG CAGGCGTGATGTTCGTCGGCATATCGAACCAGATCAGCAAGTTCGGCACCGGCGACATCCCGTACGAGATGTACAACGTC CACAGCCGCAAATGGCCGTGGGACGATTGGCAGGCGATGCTCGAAGTCTCGCCGATCTTCCATGTCGACAAAGCCGAGAC CCCGCTGCTGATCATGCATGGCGAAGAAGATACGCGCGTCGATCCGGGCCAGAGCCTCGAAATCTATCGCGCGATCAAGA TCCGCAAGCCGGATACGCCGGTGCGGCTGGTGTTCTATCCCGGCGAAGGCCACGGCAACAGCAAGGCCGCCGCGCGGTAT GACTACAACCTGCGCATGCTGCGCTGGTTCGACACCTACCTGATGACGGGCGACCGCGATGCTCCGCTGCCCGGCCCGCG GCCGGACCTCGAGATCGAGGGCGATGACAATAGCGAATGA
Upstream 100 bases:
>100_bases TTCATTGGAACTCCCCCGGCAAGGCGCTGAATTTGCGCTTCAAGTTCCACCCGCTATACCGGCGCGCAACGAAACTACAA ACGAGAGGACAATTCTCCCG
Downstream 100 bases:
>100_bases TGCATTAAAGGTTTCGACAACCCCATGCGATATGGCTCGATGAACGGAAATCGAGGGAAAGTGCCTTGCGCGCCATATTG GCTATTCTTGTTGGAGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 679; Mature: 679
Protein sequence:
>679_residues MKTLRTALLTATLLFPAPALARPMTAEDVAKLESVGSIAVSPDGSRVAYTTASLPDILAGEDNGSTTQQLKIAYARDNLR EFLPDDMNVSGIQFSPDGRWITFLWTKDDEKRAVWGIPVDGGAHRKLAAVEGAGVRSYSWAPDSSHMHLLVGAAEDKDRE AESKDGFNARIYEEEQQLNRLFRAIIGAELDPEPQEVTVPGYVTSFQIAKNARTGVIETAPTTLIDDSYTQKKVNLLDMP TGNVRMVIETTGKIDDVEISPDASQLALIAAVDMNDPAATTIHFVDTATGTIRAHNAGAPEAVVDVEYMPDGRLVAAVHV GAQSVLRIHNRDGSLQREVDPGALIITDVEIGGDQIFVEANAPQHPGELFKLDGDSFTRWTSHNPWLADIDFGEQRTFRF NASDGQEVEGVLVLPVGGVPRGGAPLIMDVHGGPEAHDSNGWTTNYSGPGQVAAGKGYAVFQPNYRGSTGYGTAFSKQHQ GNYTDPEFTDLVDAKRALVAEGIADADRVGVTGGSYGGYATAWSSTRWSEEFAAGVMFVGISNQISKFGTGDIPYEMYNV HSRKWPWDDWQAMLEVSPIFHVDKAETPLLIMHGEEDTRVDPGQSLEIYRAIKIRKPDTPVRLVFYPGEGHGNSKAAARY DYNLRMLRWFDTYLMTGDRDAPLPGPRPDLEIEGDDNSE
Sequences:
>Translated_679_residues MKTLRTALLTATLLFPAPALARPMTAEDVAKLESVGSIAVSPDGSRVAYTTASLPDILAGEDNGSTTQQLKIAYARDNLR EFLPDDMNVSGIQFSPDGRWITFLWTKDDEKRAVWGIPVDGGAHRKLAAVEGAGVRSYSWAPDSSHMHLLVGAAEDKDRE AESKDGFNARIYEEEQQLNRLFRAIIGAELDPEPQEVTVPGYVTSFQIAKNARTGVIETAPTTLIDDSYTQKKVNLLDMP TGNVRMVIETTGKIDDVEISPDASQLALIAAVDMNDPAATTIHFVDTATGTIRAHNAGAPEAVVDVEYMPDGRLVAAVHV GAQSVLRIHNRDGSLQREVDPGALIITDVEIGGDQIFVEANAPQHPGELFKLDGDSFTRWTSHNPWLADIDFGEQRTFRF NASDGQEVEGVLVLPVGGVPRGGAPLIMDVHGGPEAHDSNGWTTNYSGPGQVAAGKGYAVFQPNYRGSTGYGTAFSKQHQ GNYTDPEFTDLVDAKRALVAEGIADADRVGVTGGSYGGYATAWSSTRWSEEFAAGVMFVGISNQISKFGTGDIPYEMYNV HSRKWPWDDWQAMLEVSPIFHVDKAETPLLIMHGEEDTRVDPGQSLEIYRAIKIRKPDTPVRLVFYPGEGHGNSKAAARY DYNLRMLRWFDTYLMTGDRDAPLPGPRPDLEIEGDDNSE >Mature_679_residues MKTLRTALLTATLLFPAPALARPMTAEDVAKLESVGSIAVSPDGSRVAYTTASLPDILAGEDNGSTTQQLKIAYARDNLR EFLPDDMNVSGIQFSPDGRWITFLWTKDDEKRAVWGIPVDGGAHRKLAAVEGAGVRSYSWAPDSSHMHLLVGAAEDKDRE AESKDGFNARIYEEEQQLNRLFRAIIGAELDPEPQEVTVPGYVTSFQIAKNARTGVIETAPTTLIDDSYTQKKVNLLDMP TGNVRMVIETTGKIDDVEISPDASQLALIAAVDMNDPAATTIHFVDTATGTIRAHNAGAPEAVVDVEYMPDGRLVAAVHV GAQSVLRIHNRDGSLQREVDPGALIITDVEIGGDQIFVEANAPQHPGELFKLDGDSFTRWTSHNPWLADIDFGEQRTFRF NASDGQEVEGVLVLPVGGVPRGGAPLIMDVHGGPEAHDSNGWTTNYSGPGQVAAGKGYAVFQPNYRGSTGYGTAFSKQHQ GNYTDPEFTDLVDAKRALVAEGIADADRVGVTGGSYGGYATAWSSTRWSEEFAAGVMFVGISNQISKFGTGDIPYEMYNV HSRKWPWDDWQAMLEVSPIFHVDKAETPLLIMHGEEDTRVDPGQSLEIYRAIKIRKPDTPVRLVFYPGEGHGNSKAAARY DYNLRMLRWFDTYLMTGDRDAPLPGPRPDLEIEGDDNSE
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI23510451, Length=258, Percent_Identity=31.3953488372093, Blast_Score=121, Evalue=3e-27, Organism=Caenorhabditis elegans, GI25144537, Length=334, Percent_Identity=29.6407185628743, Blast_Score=122, Evalue=6e-28, Organism=Caenorhabditis elegans, GI25144540, Length=289, Percent_Identity=31.8339100346021, Blast_Score=121, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17552908, Length=315, Percent_Identity=29.5238095238095, Blast_Score=111, Evalue=1e-24, Organism=Caenorhabditis elegans, GI25149159, Length=261, Percent_Identity=30.2681992337165, Blast_Score=109, Evalue=5e-24, Organism=Caenorhabditis elegans, GI25144543, Length=238, Percent_Identity=30.2521008403361, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI45551969, Length=232, Percent_Identity=25.8620689655172, Blast_Score=71, Evalue=3e-12, Organism=Drosophila melanogaster, GI45550825, Length=232, Percent_Identity=25.8620689655172, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI45553511, Length=232, Percent_Identity=25.8620689655172, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 74026; Mature: 74026
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLRTALLTATLLFPAPALARPMTAEDVAKLESVGSIAVSPDGSRVAYTTASLPDILAG CCHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHCCEEEECCCCCEEEEEECCCCHHCCC EDNGSTTQQLKIAYARDNLREFLPDDMNVSGIQFSPDGRWITFLWTKDDEKRAVWGIPVD CCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCEEECCCCCEEEEEEECCCCCCEEEEECCC GGAHRKLAAVEGAGVRSYSWAPDSSHMHLLVGAAEDKDREAESKDGFNARIYEEEQQLNR CCCCCEEEEECCCCCCEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHH LFRAIIGAELDPEPQEVTVPGYVTSFQIAKNARTGVIETAPTTLIDDSYTQKKVNLLDMP HHHHHHCCCCCCCCCEEECCCEEEEEEEECCCCCCEEECCCCEEECCCCCCCEEEEEECC TGNVRMVIETTGKIDDVEISPDASQLALIAAVDMNDPAATTIHFVDTATGTIRAHNAGAP CCCEEEEEEECCCEEEEEECCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEECCCCCC EAVVDVEYMPDGRLVAAVHVGAQSVLRIHNRDGSLQREVDPGALIITDVEIGGDQIFVEA CEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEECCCCEEEEEEEEECCCEEEEEC NAPQHPGELFKLDGDSFTRWTSHNPWLADIDFGEQRTFRFNASDGQEVEGVLVLPVGGVP CCCCCCCCEEEECCCCEEEECCCCCEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCC RGGAPLIMDVHGGPEAHDSNGWTTNYSGPGQVAAGKGYAVFQPNYRGSTGYGTAFSKQHQ CCCCCEEEEECCCCCCCCCCCCEECCCCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCC GNYTDPEFTDLVDAKRALVAEGIADADRVGVTGGSYGGYATAWSSTRWSEEFAAGVMFVG CCCCCCHHHHHHHHHHHHHHHCCCCCHHEECCCCCCCCEEEECCCCCCCHHHHCCEEEEE ISNQISKFGTGDIPYEMYNVHSRKWPWDDWQAMLEVSPIFHVDKAETPLLIMHGEEDTRV CCHHHHHCCCCCCCHHEEECCCCCCCCHHHHHHEEECCEEEECCCCCCEEEEECCCCCCC DPGQSLEIYRAIKIRKPDTPVRLVFYPGEGHGNSKAAARYDYNLRMLRWFDTYLMTGDRD CCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCEEEEEEEEEHEEECCCC APLPGPRPDLEIEGDDNSE CCCCCCCCCEEECCCCCCC >Mature Secondary Structure MKTLRTALLTATLLFPAPALARPMTAEDVAKLESVGSIAVSPDGSRVAYTTASLPDILAG CCHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHCCEEEECCCCCEEEEEECCCCHHCCC EDNGSTTQQLKIAYARDNLREFLPDDMNVSGIQFSPDGRWITFLWTKDDEKRAVWGIPVD CCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCEEECCCCCEEEEEEECCCCCCEEEEECCC GGAHRKLAAVEGAGVRSYSWAPDSSHMHLLVGAAEDKDREAESKDGFNARIYEEEQQLNR CCCCCEEEEECCCCCCEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHH LFRAIIGAELDPEPQEVTVPGYVTSFQIAKNARTGVIETAPTTLIDDSYTQKKVNLLDMP HHHHHHCCCCCCCCCEEECCCEEEEEEEECCCCCCEEECCCCEEECCCCCCCEEEEEECC TGNVRMVIETTGKIDDVEISPDASQLALIAAVDMNDPAATTIHFVDTATGTIRAHNAGAP CCCEEEEEEECCCEEEEEECCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEECCCCCC EAVVDVEYMPDGRLVAAVHVGAQSVLRIHNRDGSLQREVDPGALIITDVEIGGDQIFVEA CEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEECCCCEEEEEEEEECCCEEEEEC NAPQHPGELFKLDGDSFTRWTSHNPWLADIDFGEQRTFRFNASDGQEVEGVLVLPVGGVP CCCCCCCCEEEECCCCEEEECCCCCEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCC RGGAPLIMDVHGGPEAHDSNGWTTNYSGPGQVAAGKGYAVFQPNYRGSTGYGTAFSKQHQ CCCCCEEEEECCCCCCCCCCCCEECCCCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCC GNYTDPEFTDLVDAKRALVAEGIADADRVGVTGGSYGGYATAWSSTRWSEEFAAGVMFVG CCCCCCHHHHHHHHHHHHHHHCCCCCHHEECCCCCCCCEEEECCCCCCCHHHHCCEEEEE ISNQISKFGTGDIPYEMYNVHSRKWPWDDWQAMLEVSPIFHVDKAETPLLIMHGEEDTRV CCHHHHHCCCCCCCHHEEECCCCCCCCHHHHHHEEECCEEEECCCCCCEEEEECCCCCCC DPGQSLEIYRAIKIRKPDTPVRLVFYPGEGHGNSKAAARYDYNLRMLRWFDTYLMTGDRD CCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCEEEEEEEEEHEEECCCC APLPGPRPDLEIEGDDNSE CCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]