Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
---|---|
Accession | NC_007722 |
Length | 3,052,398 |
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The map label for this gene is gmk
Identifier: 85374744
GI number: 85374744
Start: 1952573
End: 1953214
Strand: Direct
Name: gmk
Synonym: ELI_09585
Alternate gene names: 85374744
Gene position: 1952573-1953214 (Clockwise)
Preceding gene: 85374743
Following gene: 85374745
Centisome position: 63.97
GC content: 60.9
Gene sequence:
>642_bases ATGGCCCACGACCAATCCGATGCGCTGAACCGGCGCGGACTTCTGTTCATCCTCTCTTCCCCTTCCGGCGCGGGGAAGAC GACGATCTCGCGCATGCTGCTGACGGCGGACGAGCAGATCAAGCTTTCGGTCAGCGCCACGACCCGGCCCAAGCGGCCCG GCGAAATTGATGGGGTCGATTATCATTTCGTCACCCGCGAAAAGTTCGACGAAATGATCGAGAAGGACGAGTTCTACGAA TGGGCCGAGGTTTTCGGGCATCGCTACGGCACGCCCAAGGGCTATATCCGGCAGGGGCTGAAGGAAGGGCAGGATTTCCT GTTCGACATCGACTGGCAGGGCACCCAGCAGCTCAAGCAGAAGGACGACCAGGATGTTGTCACTGTCTTCATCCTGCCGC CGAGCCTCGACGAGCTGCGTCACCGGCTTGAAACCCGTGCCCAGGACAGCGAGGACGTGATCGACCGCCGGATGGACCGC GCGCGCGGCGAGATCAGCCACTGGGCCGAATACGATTATGTCGTCGTCAACGACGACGTCGACCATTGCTTCGTCAAGGT GCGCGAAATCCTCCATGCCGAACGTATGAAGCGCACCCGCCAGACCGGTCTGATCCCGTTTGTGCGTGAACTCATGGCGT GA
Upstream 100 bases:
>100_bases AGGGCACCAGGACCGACACCAGACGGCAATTGGCCGCGCACCGGTGCGTTCGCCGCCGGGCGGGGTTGATTTCTTCATCG TAGCCGGGCCAAGAGCACAC
Downstream 100 bases:
>100_bases CCCGCTTAAGGCGGCATACACGACCGGAGGCGCATAGCCGCCTTCTCAACCCCAGCTACCGCGAGATTTTGTGAACGCAC CTTCCTTTGACATGACTGCC
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MAHDQSDALNRRGLLFILSSPSGAGKTTISRMLLTADEQIKLSVSATTRPKRPGEIDGVDYHFVTREKFDEMIEKDEFYE WAEVFGHRYGTPKGYIRQGLKEGQDFLFDIDWQGTQQLKQKDDQDVVTVFILPPSLDELRHRLETRAQDSEDVIDRRMDR ARGEISHWAEYDYVVVNDDVDHCFVKVREILHAERMKRTRQTGLIPFVRELMA
Sequences:
>Translated_213_residues MAHDQSDALNRRGLLFILSSPSGAGKTTISRMLLTADEQIKLSVSATTRPKRPGEIDGVDYHFVTREKFDEMIEKDEFYE WAEVFGHRYGTPKGYIRQGLKEGQDFLFDIDWQGTQQLKQKDDQDVVTVFILPPSLDELRHRLETRAQDSEDVIDRRMDR ARGEISHWAEYDYVVVNDDVDHCFVKVREILHAERMKRTRQTGLIPFVRELMA >Mature_212_residues AHDQSDALNRRGLLFILSSPSGAGKTTISRMLLTADEQIKLSVSATTRPKRPGEIDGVDYHFVTREKFDEMIEKDEFYEW AEVFGHRYGTPKGYIRQGLKEGQDFLFDIDWQGTQQLKQKDDQDVVTVFILPPSLDELRHRLETRAQDSEDVIDRRMDRA RGEISHWAEYDYVVVNDDVDHCFVKVREILHAERMKRTRQTGLIPFVRELMA
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874833, Length=191, Percent_Identity=36.1256544502618, Blast_Score=117, Evalue=6e-27, Organism=Homo sapiens, GI4504221, Length=191, Percent_Identity=36.1256544502618, Blast_Score=117, Evalue=6e-27, Organism=Homo sapiens, GI226874831, Length=191, Percent_Identity=36.1256544502618, Blast_Score=117, Evalue=6e-27, Organism=Homo sapiens, GI38570142, Length=185, Percent_Identity=27.5675675675676, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI4505237, Length=183, Percent_Identity=29.5081967213115, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI262118259, Length=183, Percent_Identity=29.5081967213115, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI262118255, Length=183, Percent_Identity=29.5081967213115, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI262118263, Length=183, Percent_Identity=29.5081967213115, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI14780902, Length=181, Percent_Identity=27.0718232044199, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI4557529, Length=150, Percent_Identity=31.3333333333333, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI192447426, Length=151, Percent_Identity=31.1258278145695, Blast_Score=68, Evalue=5e-12, Organism=Homo sapiens, GI21361598, Length=191, Percent_Identity=25.130890052356, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI111154074, Length=179, Percent_Identity=26.8156424581006, Blast_Score=64, Evalue=7e-11, Organism=Homo sapiens, GI148539578, Length=150, Percent_Identity=28.6666666666667, Blast_Score=64, Evalue=7e-11, Organism=Homo sapiens, GI148539628, Length=150, Percent_Identity=28.6666666666667, Blast_Score=64, Evalue=8e-11, Organism=Homo sapiens, GI119943108, Length=150, Percent_Identity=27.3333333333333, Blast_Score=64, Evalue=9e-11, Organism=Homo sapiens, GI261862237, Length=151, Percent_Identity=27.1523178807947, Blast_Score=64, Evalue=1e-10, Organism=Escherichia coli, GI1790080, Length=192, Percent_Identity=49.4791666666667, Blast_Score=186, Evalue=9e-49, Organism=Caenorhabditis elegans, GI193203132, Length=181, Percent_Identity=33.1491712707182, Blast_Score=103, Evalue=9e-23, Organism=Caenorhabditis elegans, GI17508835, Length=181, Percent_Identity=33.1491712707182, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17557440, Length=188, Percent_Identity=26.5957446808511, Blast_Score=64, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17556244, Length=129, Percent_Identity=28.6821705426357, Blast_Score=63, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6320662, Length=182, Percent_Identity=36.2637362637363, Blast_Score=142, Evalue=4e-35, Organism=Drosophila melanogaster, GI21356141, Length=190, Percent_Identity=32.1052631578947, Blast_Score=110, Evalue=6e-25, Organism=Drosophila melanogaster, GI161077626, Length=170, Percent_Identity=29.4117647058824, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI116007136, Length=171, Percent_Identity=29.2397660818713, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI45554481, Length=170, Percent_Identity=29.4117647058824, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI45554489, Length=171, Percent_Identity=29.2397660818713, Blast_Score=81, Evalue=5e-16, Organism=Drosophila melanogaster, GI24640542, Length=170, Percent_Identity=29.4117647058824, Blast_Score=81, Evalue=5e-16, Organism=Drosophila melanogaster, GI85724806, Length=170, Percent_Identity=29.4117647058824, Blast_Score=81, Evalue=5e-16, Organism=Drosophila melanogaster, GI221330162, Length=144, Percent_Identity=32.6388888888889, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI221330166, Length=144, Percent_Identity=32.6388888888889, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI221330164, Length=144, Percent_Identity=32.6388888888889, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI45554813, Length=150, Percent_Identity=30.6666666666667, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 24832; Mature: 24701
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHDQSDALNRRGLLFILSSPSGAGKTTISRMLLTADEQIKLSVSATTRPKRPGEIDGVD CCCCCCHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCC YHFVTREKFDEMIEKDEFYEWAEVFGHRYGTPKGYIRQGLKEGQDFLFDIDWQGTQQLKQ EEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHC KDDQDVVTVFILPPSLDELRHRLETRAQDSEDVIDRRMDRARGEISHWAEYDYVVVNDDV CCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCH DHCFVKVREILHAERMKRTRQTGLIPFVRELMA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC >Mature Secondary Structure AHDQSDALNRRGLLFILSSPSGAGKTTISRMLLTADEQIKLSVSATTRPKRPGEIDGVD CCCCCHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCC YHFVTREKFDEMIEKDEFYEWAEVFGHRYGTPKGYIRQGLKEGQDFLFDIDWQGTQQLKQ EEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHC KDDQDVVTVFILPPSLDELRHRLETRAQDSEDVIDRRMDRARGEISHWAEYDYVVVNDDV CCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCH DHCFVKVREILHAERMKRTRQTGLIPFVRELMA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA