Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
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Accession | NC_007722 |
Length | 3,052,398 |
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The map label for this gene is 85374688
Identifier: 85374688
GI number: 85374688
Start: 1894033
End: 1894914
Strand: Direct
Name: 85374688
Synonym: ELI_09305
Alternate gene names: NA
Gene position: 1894033-1894914 (Clockwise)
Preceding gene: 85374687
Following gene: 85374689
Centisome position: 62.05
GC content: 62.59
Gene sequence:
>882_bases ATGAGCGAGACGACCCTGGCCATGGCCCGACTGATCGAACTCGAAGACGATCTCGAAACCGTCAAGGACGGAGGCCGGAA CGTCGAGGTCCAGTTCAACCCGGAAACGCTTAAGCTCGCCTTCGCCAACGAAGTGCAGCAGCCTGAGGGCGGCGACCAGA ACAGTGGCACCTCGGGTCAGCAATTTGTCGGCGCCGGAAGCACCACGCTGACGGTCACGCTGTGGTTCGACGTCACGGCG ATGGAAACCGATCCGGTCGACGATGTCCGCCGCAAGACCAAGGAGGTGCTCTATTTCATGACGCCTCAGGAATTCTCCGG CGACAACACCAAGCTCGTCCCGCCGGGCGTGCGCTTTCAGTGGTCGAACCTGATCTTCGACGGTCTCGTCACCTCGATGG AGGAAAATCTCGAGTTCTTCTCCCCCGAAGGCAAGCCGCTGCGCGCCAATATGGCGCTGGGCTTCACGCAGCAGAAGATT CTCGTTTCCAATTTCGACGGCACCGGCGCGGTCCCGCAGCAGCAGGGCAACAAGCCGCTCGACCAGGCCAAGGACGGTGA CAGCCTCCAGAAGATGGCCGATAAGAAAGGCAAGGGTGACGATTGGCAGTCCATTGCCGAGGCTAACAAGGTCGAAGACC CACTGCGGATGAAGCCGGGCAAGCTGCTCGATCTCAATGCCAAGGTCTCGCTGCCCAAGATCAAGGTCAAACCCCCGCCC CTCGGTGTGAGTGTGGGCGCGGGACTGTCGATCGGCCCGCAGGGCGCATCCATCGGCCTCAGCTCCGGCCTGCCGCAGGC CGGAGCAGTCCCTGCCACCGGCCCCCAGATCGGCTTGCCCAGCGTCATAACCCCGCCGCTGCCCAAGCTGCGGATCGAAT AG
Upstream 100 bases:
>100_bases ATGCCAAGGATGGCGCGATTGCGGTCGAGGAATTCCAGCTCGCTTACGACAAGTTCGAGCTGGTCGAAGAACAATCTCAG GATCAGGCGGAGGCTGCGGC
Downstream 100 bases:
>100_bases GAGCATCGCCATGTCCGTCGTCATCAACGAGTTCGAAACTCTCGGCGAAGCGCCTCCGCCTGCGACCTCCGCCAACGGCG CATCGCCGCAAGCCACCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSETTLAMARLIELEDDLETVKDGGRNVEVQFNPETLKLAFANEVQQPEGGDQNSGTSGQQFVGAGSTTLTVTLWFDVTA METDPVDDVRRKTKEVLYFMTPQEFSGDNTKLVPPGVRFQWSNLIFDGLVTSMEENLEFFSPEGKPLRANMALGFTQQKI LVSNFDGTGAVPQQQGNKPLDQAKDGDSLQKMADKKGKGDDWQSIAEANKVEDPLRMKPGKLLDLNAKVSLPKIKVKPPP LGVSVGAGLSIGPQGASIGLSSGLPQAGAVPATGPQIGLPSVITPPLPKLRIE
Sequences:
>Translated_293_residues MSETTLAMARLIELEDDLETVKDGGRNVEVQFNPETLKLAFANEVQQPEGGDQNSGTSGQQFVGAGSTTLTVTLWFDVTA METDPVDDVRRKTKEVLYFMTPQEFSGDNTKLVPPGVRFQWSNLIFDGLVTSMEENLEFFSPEGKPLRANMALGFTQQKI LVSNFDGTGAVPQQQGNKPLDQAKDGDSLQKMADKKGKGDDWQSIAEANKVEDPLRMKPGKLLDLNAKVSLPKIKVKPPP LGVSVGAGLSIGPQGASIGLSSGLPQAGAVPATGPQIGLPSVITPPLPKLRIE >Mature_292_residues SETTLAMARLIELEDDLETVKDGGRNVEVQFNPETLKLAFANEVQQPEGGDQNSGTSGQQFVGAGSTTLTVTLWFDVTAM ETDPVDDVRRKTKEVLYFMTPQEFSGDNTKLVPPGVRFQWSNLIFDGLVTSMEENLEFFSPEGKPLRANMALGFTQQKIL VSNFDGTGAVPQQQGNKPLDQAKDGDSLQKMADKKGKGDDWQSIAEANKVEDPLRMKPGKLLDLNAKVSLPKIKVKPPPL GVSVGAGLSIGPQGASIGLSSGLPQAGAVPATGPQIGLPSVITPPLPKLRIE
Specific function: Unknown
COG id: COG1652
COG function: function code S; Uncharacterized protein containing LysM domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31400; Mature: 31269
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETTLAMARLIELEDDLETVKDGGRNVEVQFNPETLKLAFANEVQQPEGGDQNSGTSGQ CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEHHCCCCCCCCCCCCCCCCC QFVGAGSTTLTVTLWFDVTAMETDPVDDVRRKTKEVLYFMTPQEFSGDNTKLVPPGVRFQ EEEECCCCEEEEEEEEEEEECCCCCHHHHHHHHHHEEEEECCHHCCCCCCEECCCCCCEE WSNLIFDGLVTSMEENLEFFSPEGKPLRANMALGFTQQKILVSNFDGTGAVPQQQGNKPL HHHHHHHHHHHHHHHCCCEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCHHCCCCCC DQAKDGDSLQKMADKKGKGDDWQSIAEANKVEDPLRMKPGKLLDLNAKVSLPKIKVKPPP HHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHCCCCCEEEECCEEECCEEEECCCC LGVSVGAGLSIGPQGASIGLSSGLPQAGAVPATGPQIGLPSVITPPLPKLRIE CCEECCCCCEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SETTLAMARLIELEDDLETVKDGGRNVEVQFNPETLKLAFANEVQQPEGGDQNSGTSGQ CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEHHCCCCCCCCCCCCCCCCC QFVGAGSTTLTVTLWFDVTAMETDPVDDVRRKTKEVLYFMTPQEFSGDNTKLVPPGVRFQ EEEECCCCEEEEEEEEEEEECCCCCHHHHHHHHHHEEEEECCHHCCCCCCEECCCCCCEE WSNLIFDGLVTSMEENLEFFSPEGKPLRANMALGFTQQKILVSNFDGTGAVPQQQGNKPL HHHHHHHHHHHHHHHCCCEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCHHCCCCCC DQAKDGDSLQKMADKKGKGDDWQSIAEANKVEDPLRMKPGKLLDLNAKVSLPKIKVKPPP HHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHCCCCCEEEECCEEECCEEEECCCC LGVSVGAGLSIGPQGASIGLSSGLPQAGAVPATGPQIGLPSVITPPLPKLRIE CCEECCCCCEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA