Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
---|---|
Accession | NC_007722 |
Length | 3,052,398 |
Click here to switch to the map view.
The map label for this gene is astB [H]
Identifier: 85374612
GI number: 85374612
Start: 1818709
End: 1819959
Strand: Direct
Name: astB [H]
Synonym: ELI_08925
Alternate gene names: 85374612
Gene position: 1818709-1819959 (Clockwise)
Preceding gene: 85374611
Following gene: 85374613
Centisome position: 59.58
GC content: 66.11
Gene sequence:
>1251_bases ATGTCCCTCGCAGAAATCAACTTCGACGGCATCGTCGGCCCGTCGCACAATTACGCCGGCCTCAGCCTGGGCAATATCGC CAGCGCCAGCCACAAGGGCGATCCGTCCTATCCGCGCGCCGCCGCGCTGCAGGGGGTCGCCAAGATGCGCGGCAACATGG CTCACGGGCTGGCGCAAGGGTATCTATTGCCTTTGCCGCGACCCAAGGTGGAGACGCTGGCCCGGCTGGCGGTCGATCCA TCCGCCGATCGCGCGCTGCGCGCCGCGGCATGGTCCGCCTCCAGCATGTGGACCGCCAATGCCGCCACGGTCAGCCCGGC GCCGGACACCGCAGACGGAAAATGTCACTTCACGCCCGCCAACCTCGTCACCATGGTGCACCGCGCACAGGAATGGCGCG ACACCAAGGCTCAGCTCGACATCGCCTTCGGCGACACCGCGCATTTCACCGTCCACCACGCAGTGCCGCCGAGTTTCGGC GACGAAGGCGCGGCCAACCATATGCGTTTTTGCGAAGGGCATGACGCGCCGGGCGTCGAAGTGTTCGTCTATGGCAGGCC GGGCGGCAAATTCGCCGCGCGTCAGCATGAACAGGCCAGCCGCGCTGTCGCCCGGCTGCATGGTCTCGATCCTGCGCGCG CTCTGTTTATCGAGCAGAATCCCGGTGCCATCGAGGCCGGGGCGTTTCACAACGATGTCGTTGCCGTCGCGAACGAGCGC GTGCTGTTCACGCATGAAGAGGCATTCGCCGACCAGAAGGGCGCTTACGACGCGATCCGCGCCGCTTTTCCCGCTCTGGA AGTCGTGGAAGTGTCGTCCAGCGCAGTGAGCCTGGCCGAAGCGATCAAGACCTATCTCTTCAACGGGCAATTGCTGACGC TCCCCTCCGGCGAGATGGCGCTGGTCGTTCCCGAAGAGTGCCGCGAGAGCGCGAGCGTATGGGCCTGGGCGGAGACGATG ATGGCTTCGAATGGTCCGATCCGGCGGGTCATCCCGGTCGATGTGCGCCAATCCATGGCCAACGGCGGCGGTCCCGCCTG CCTGCGCCTGCGGGTGGTCGCCGATCCGGCCACGGTCGATCCGCGCTTCCTGCTGAGCGAGGCGCGCGCCGATGCCATCG AGCAGGTGATTGCAGCGCATTGGCCCGAGCAGATCGACCCCTCCGACATCGGCGATGAAGCCCTGGCGAACACCGTGCGC ACCGCGCGTGGCAAGCTATTGGAAGCGCTCGACCTCATGCAACTGGGTTAA
Upstream 100 bases:
>100_bases CCATCATCCCGTCATCCCAGCGAAAGCTGGGATCTGGTTCAGGCACGCGCGAGCATGCCGCAAGAGATCCCAGCTTTCGC TGGGATGACGAGGTAAATTC
Downstream 100 bases:
>100_bases CGCGCTTGCCGCTTCGTCGGCGAGCTTTACACTGCGTGCGTCATTAACCACTGCAAATGGCAGGCCAGCGTGGATGGCAC GTCGCTTGCAAAGCCAGAGG
Product: succinylarginine dihydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MSLAEINFDGIVGPSHNYAGLSLGNIASASHKGDPSYPRAAALQGVAKMRGNMAHGLAQGYLLPLPRPKVETLARLAVDP SADRALRAAAWSASSMWTANAATVSPAPDTADGKCHFTPANLVTMVHRAQEWRDTKAQLDIAFGDTAHFTVHHAVPPSFG DEGAANHMRFCEGHDAPGVEVFVYGRPGGKFAARQHEQASRAVARLHGLDPARALFIEQNPGAIEAGAFHNDVVAVANER VLFTHEEAFADQKGAYDAIRAAFPALEVVEVSSSAVSLAEAIKTYLFNGQLLTLPSGEMALVVPEECRESASVWAWAETM MASNGPIRRVIPVDVRQSMANGGGPACLRLRVVADPATVDPRFLLSEARADAIEQVIAAHWPEQIDPSDIGDEALANTVR TARGKLLEALDLMQLG
Sequences:
>Translated_416_residues MSLAEINFDGIVGPSHNYAGLSLGNIASASHKGDPSYPRAAALQGVAKMRGNMAHGLAQGYLLPLPRPKVETLARLAVDP SADRALRAAAWSASSMWTANAATVSPAPDTADGKCHFTPANLVTMVHRAQEWRDTKAQLDIAFGDTAHFTVHHAVPPSFG DEGAANHMRFCEGHDAPGVEVFVYGRPGGKFAARQHEQASRAVARLHGLDPARALFIEQNPGAIEAGAFHNDVVAVANER VLFTHEEAFADQKGAYDAIRAAFPALEVVEVSSSAVSLAEAIKTYLFNGQLLTLPSGEMALVVPEECRESASVWAWAETM MASNGPIRRVIPVDVRQSMANGGGPACLRLRVVADPATVDPRFLLSEARADAIEQVIAAHWPEQIDPSDIGDEALANTVR TARGKLLEALDLMQLG >Mature_415_residues SLAEINFDGIVGPSHNYAGLSLGNIASASHKGDPSYPRAAALQGVAKMRGNMAHGLAQGYLLPLPRPKVETLARLAVDPS ADRALRAAAWSASSMWTANAATVSPAPDTADGKCHFTPANLVTMVHRAQEWRDTKAQLDIAFGDTAHFTVHHAVPPSFGD EGAANHMRFCEGHDAPGVEVFVYGRPGGKFAARQHEQASRAVARLHGLDPARALFIEQNPGAIEAGAFHNDVVAVANERV LFTHEEAFADQKGAYDAIRAAFPALEVVEVSSSAVSLAEAIKTYLFNGQLLTLPSGEMALVVPEECRESASVWAWAETMM ASNGPIRRVIPVDVRQSMANGGGPACLRLRVVADPATVDPRFLLSEARADAIEQVIAAHWPEQIDPSDIGDEALANTVRT ARGKLLEALDLMQLG
Specific function: Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2) [H]
COG id: COG3724
COG function: function code E; Succinylarginine dihydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the succinylarginine dihydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1788041, Length=433, Percent_Identity=41.5704387990762, Blast_Score=329, Evalue=2e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007079 [H]
Pfam domain/function: PF04996 AstB [H]
EC number: =3.5.3.23 [H]
Molecular weight: Translated: 44310; Mature: 44179
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAEINFDGIVGPSHNYAGLSLGNIASASHKGDPSYPRAAALQGVAKMRGNMAHGLAQG CCCEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCC YLLPLPRPKVETLARLAVDPSADRALRAAAWSASSMWTANAATVSPAPDTADGKCHFTPA CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCEECCCEEECCCCCCCCCEEEECHH NLVTMVHRAQEWRDTKAQLDIAFGDTAHFTVHHAVPPSFGDEGAANHMRFCEGHDAPGVE HHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCEE VFVYGRPGGKFAARQHEQASRAVARLHGLDPARALFIEQNPGAIEAGAFHNDVVAVANER EEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCEECCCCCCCEEEEECCE VLFTHEEAFADQKGAYDAIRAAFPALEVVEVSSSAVSLAEAIKTYLFNGQLLTLPSGEMA EEEEEHHHHHCCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCEE LVVPEECRESASVWAWAETMMASNGPIRRVIPVDVRQSMANGGGPACLRLRVVADPATVD EEECHHHHCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCEEEEEEEEECCCCCC PRFLLSEARADAIEQVIAAHWPEQIDPSDIGDEALANTVRTARGKLLEALDLMQLG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLAEINFDGIVGPSHNYAGLSLGNIASASHKGDPSYPRAAALQGVAKMRGNMAHGLAQG CCEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCC YLLPLPRPKVETLARLAVDPSADRALRAAAWSASSMWTANAATVSPAPDTADGKCHFTPA CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCEECCCEEECCCCCCCCCEEEECHH NLVTMVHRAQEWRDTKAQLDIAFGDTAHFTVHHAVPPSFGDEGAANHMRFCEGHDAPGVE HHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCEE VFVYGRPGGKFAARQHEQASRAVARLHGLDPARALFIEQNPGAIEAGAFHNDVVAVANER EEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCEECCCCCCCEEEEECCE VLFTHEEAFADQKGAYDAIRAAFPALEVVEVSSSAVSLAEAIKTYLFNGQLLTLPSGEMA EEEEEHHHHHCCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCEE LVVPEECRESASVWAWAETMMASNGPIRRVIPVDVRQSMANGGGPACLRLRVVADPATVD EEECHHHHCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCEEEEEEEEECCCCCC PRFLLSEARADAIEQVIAAHWPEQIDPSDIGDEALANTVRTARGKLLEALDLMQLG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA