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The map label for this gene is 85374601

Identifier: 85374601

GI number: 85374601

Start: 1805453

End: 1805887

Strand: Reverse

Name: 85374601

Synonym: ELI_08870

Alternate gene names: NA

Gene position: 1805887-1805453 (Counterclockwise)

Preceding gene: 85374602

Following gene: 85374600

Centisome position: 59.16

GC content: 63.68

Gene sequence:

>435_bases
ATGAAAGCGGACTTCTGGCAGCTTTCGCGCGATCCGGCAGACAAGGTCGTGGCCATGATCGCTGCGAGGGTTCTCGATGA
AGGCGAACGGCTGCTCGTCGTCGCGAAGGACGACGAGAAGCGGGCGGCGATTGCGAAAGCGCTGTGGGAAGCGAAGCCGG
AGCACTTCCTGGCGAATGGCGAGGCGTCGGCCGACCATGCCGAGCGCCAGCCGATCCTTCTCGGCGAAACGTGCGAGGCC
GCCAACGGTGCGAGTCATGTAATCTTTGCCGACGGCGAATGGCGCGATCCGCACGGTTTCGAGCGCGCCTTCCTGCTGTT
CAGCGACGAGACGCTGGAGGCTGCACGCGCAACCTGGCGCGCCCTTGACGGAACCGATGGTCTGGAGCGATCATTCTTCC
GACAAGAAGGCGGCAAATGGACCAAGGTCGCCTGA

Upstream 100 bases:

>100_bases
CCGTTCACCTGGCGCAAGAAGTGGGAGCGCGATTGGGACAACGTGAAGTATTGTTCGGAGCGCTGCCGCCGCAGCGCGAA
GAATGCGGGGTGAGGCGAAA

Downstream 100 bases:

>100_bases
TCAGCAGTCTCGGGAGAATTCCATGCGTATCGTCCTGCCTGTCATCGCCGCGCTCGCGCTTGCCGCATGCGGTTCGGAAA
CCTCCGGCACGCTCGAGGGC

Product: DNA polymerase III chi subunit

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Chi Subunit HolC; DNA Polymerase III Chi Subunit; DNA Polymerase III Chi Subunit Superfamily

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKADFWQLSRDPADKVVAMIAARVLDEGERLLVVAKDDEKRAAIAKALWEAKPEHFLANGEASADHAERQPILLGETCEA
ANGASHVIFADGEWRDPHGFERAFLLFSDETLEAARATWRALDGTDGLERSFFRQEGGKWTKVA

Sequences:

>Translated_144_residues
MKADFWQLSRDPADKVVAMIAARVLDEGERLLVVAKDDEKRAAIAKALWEAKPEHFLANGEASADHAERQPILLGETCEA
ANGASHVIFADGEWRDPHGFERAFLLFSDETLEAARATWRALDGTDGLERSFFRQEGGKWTKVA
>Mature_144_residues
MKADFWQLSRDPADKVVAMIAARVLDEGERLLVVAKDDEKRAAIAKALWEAKPEHFLANGEASADHAERQPILLGETCEA
ANGASHVIFADGEWRDPHGFERAFLLFSDETLEAARATWRALDGTDGLERSFFRQEGGKWTKVA

Specific function: Unknown

COG id: COG2927

COG function: function code L; DNA polymerase III, chi subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 16009; Mature: 16009

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKADFWQLSRDPADKVVAMIAARVLDEGERLLVVAKDDEKRAAIAKALWEAKPEHFLANG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEECCC
EASADHAERQPILLGETCEAANGASHVIFADGEWRDPHGFERAFLLFSDETLEAARATWR
CCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHH
ALDGTDGLERSFFRQEGGKWTKVA
HCCCCCHHHHHHHHHCCCCEECCC
>Mature Secondary Structure
MKADFWQLSRDPADKVVAMIAARVLDEGERLLVVAKDDEKRAAIAKALWEAKPEHFLANG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEECCC
EASADHAERQPILLGETCEAANGASHVIFADGEWRDPHGFERAFLLFSDETLEAARATWR
CCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHH
ALDGTDGLERSFFRQEGGKWTKVA
HCCCCCHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA