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The map label for this gene is 85374218

Identifier: 85374218

GI number: 85374218

Start: 1442415

End: 1443500

Strand: Direct

Name: 85374218

Synonym: ELI_06955

Alternate gene names: NA

Gene position: 1442415-1443500 (Clockwise)

Preceding gene: 85374217

Following gene: 85374219

Centisome position: 47.26

GC content: 63.81

Gene sequence:

>1086_bases
ATGGAGCAGAATCGCGAGAAACCGGTCGCCGGGCGCGGCGCGCAATCGGGCGATGTGTCGACCCGGTTCGGGCTGTCGGT
CCGCAAAGTCGATGGCGACTGGCGCGATCACATGGTCGCGCTCGATGGCCCTCCCCCCAAGCTGCGTACGCATGTGACGG
AAGAGCGACCCAGGTCGATCATCAGCTTCAACCAGTCGCCCGACATCTTCTTCGACCGCTCGATCAACGCCTATCGCGGC
TGCGAGCATGGCTGCGTCTATTGCTTTGCGCGCCCGACCCACGCCTATCACGATCTCTCGCCGGGCCTCGATTTCGAAAC
GCAATTGTTTGCCAAGCCCAATGCCGCGGAGCTTCTGCGCGCCACACTGGCGAAGCCCAAATACGCGCCCAGACCGATCG
CGATGGGGACCAATACCGATCCCTACCAGCCGATCGAGCGCAAATACCGCATCACGCGCGAAGTGCTCGAGGTGTGTCTC
GACGCCCGCCATCCGGTGACCATCACCACGAAATCCGACCGGGTGCTGGACGATCTCGACCTGCTGGCCGAAATGGCGCG
GCGGCGACTGGTGGCTGTGGCGATCTCCGTCACCAGCCTCGATCCGAAGCTCTCGACCAGGCTCGAACCGCGTACAGCAA
CACCCGCCAAGCGACTCGATGCGCTCGGGAAACTGGCCGATGCAGGCGTGCCGACGCATTGTTCGGTCGCTCCTGTCATC
CCTGCCATCACGGACCGTTTCATGGAAGAGATCGTCCAGCGAGCCGCCGCGCTTGGCGTACCGTCGGTCGGCTGGATCCC
GCTGCGCCTTCCGCACGAAGTCTCGCCGCTCTTCCGCGAATGGCTGGACGTGCATTTTCCCGAGCGGGCGGGAAAAGTGA
TGTCGATCGTTCGCTCGATCCGCTCGGGCAAGGACAACGATCCGAATTTCTTCACTCGCCTGCGCCCGACCGGCGTCTGG
GACGATCTTTTCCGCGCGCGCTTCGCCCTCGCCTGCAGGAGAGCGGGCGTGAAGCGCCATCGCTTCGAACTGGATTGCAG
CGCTTTCCGCAGGCCAGAAATCGACGGCCAACTCAGGCTGCTGTAG

Upstream 100 bases:

>100_bases
GAATCGGTGCTGCTGCTCGGACTGTGGGCTAGCGGTGCGGCGCTGCAAGTGTCGCTCGGATAAACTTCCTTTTGTTCCAC
ATTTGTTCTATCCTGTGCGG

Downstream 100 bases:

>100_bases
CCGCGCCGCGTGGGTCGCACAGCGCCGAGGTTGCATCCTTGCGAAGCACGGTGTTACGGTCCGGGCTGTTACATATCAGA
GGGGGAAAAATGCGACACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MEQNREKPVAGRGAQSGDVSTRFGLSVRKVDGDWRDHMVALDGPPPKLRTHVTEERPRSIISFNQSPDIFFDRSINAYRG
CEHGCVYCFARPTHAYHDLSPGLDFETQLFAKPNAAELLRATLAKPKYAPRPIAMGTNTDPYQPIERKYRITREVLEVCL
DARHPVTITTKSDRVLDDLDLLAEMARRRLVAVAISVTSLDPKLSTRLEPRTATPAKRLDALGKLADAGVPTHCSVAPVI
PAITDRFMEEIVQRAAALGVPSVGWIPLRLPHEVSPLFREWLDVHFPERAGKVMSIVRSIRSGKDNDPNFFTRLRPTGVW
DDLFRARFALACRRAGVKRHRFELDCSAFRRPEIDGQLRLL

Sequences:

>Translated_361_residues
MEQNREKPVAGRGAQSGDVSTRFGLSVRKVDGDWRDHMVALDGPPPKLRTHVTEERPRSIISFNQSPDIFFDRSINAYRG
CEHGCVYCFARPTHAYHDLSPGLDFETQLFAKPNAAELLRATLAKPKYAPRPIAMGTNTDPYQPIERKYRITREVLEVCL
DARHPVTITTKSDRVLDDLDLLAEMARRRLVAVAISVTSLDPKLSTRLEPRTATPAKRLDALGKLADAGVPTHCSVAPVI
PAITDRFMEEIVQRAAALGVPSVGWIPLRLPHEVSPLFREWLDVHFPERAGKVMSIVRSIRSGKDNDPNFFTRLRPTGVW
DDLFRARFALACRRAGVKRHRFELDCSAFRRPEIDGQLRLL
>Mature_361_residues
MEQNREKPVAGRGAQSGDVSTRFGLSVRKVDGDWRDHMVALDGPPPKLRTHVTEERPRSIISFNQSPDIFFDRSINAYRG
CEHGCVYCFARPTHAYHDLSPGLDFETQLFAKPNAAELLRATLAKPKYAPRPIAMGTNTDPYQPIERKYRITREVLEVCL
DARHPVTITTKSDRVLDDLDLLAEMARRRLVAVAISVTSLDPKLSTRLEPRTATPAKRLDALGKLADAGVPTHCSVAPVI
PAITDRFMEEIVQRAAALGVPSVGWIPLRLPHEVSPLFREWLDVHFPERAGKVMSIVRSIRSGKDNDPNFFTRLRPTGVW
DDLFRARFALACRRAGVKRHRFELDCSAFRRPEIDGQLRLL

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 40702; Mature: 40702

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQNREKPVAGRGAQSGDVSTRFGLSVRKVDGDWRDHMVALDGPPPKLRTHVTEERPRSI
CCCCCCCCCCCCCCCCCCCCHHHCCEEEECCCCCCCCEEEECCCCCHHHHCCCHHCCHHH
ISFNQSPDIFFDRSINAYRGCEHGCVYCFARPTHAYHDLSPGLDFETQLFAKPNAAELLR
EECCCCCCEEEECCCCHHHCCCCCEEEEEECCCCCHHCCCCCCCCCHHEECCCCHHHHHH
ATLAKPKYAPRPIAMGTNTDPYQPIERKYRITREVLEVCLDARHPVTITTKSDRVLDDLD
HHHCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH
LLAEMARRRLVAVAISVTSLDPKLSTRLEPRTATPAKRLDALGKLADAGVPTHCSVAPVI
HHHHHHHHHHHHEEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH
PAITDRFMEEIVQRAAALGVPSVGWIPLRLPHEVSPLFREWLDVHFPERAGKVMSIVRSI
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RSGKDNDPNFFTRLRPTGVWDDLFRARFALACRRAGVKRHRFELDCSAFRRPEIDGQLRL
HCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCHHHEEECCHHHHCCCCCCCCEEE
L
C
>Mature Secondary Structure
MEQNREKPVAGRGAQSGDVSTRFGLSVRKVDGDWRDHMVALDGPPPKLRTHVTEERPRSI
CCCCCCCCCCCCCCCCCCCCHHHCCEEEECCCCCCCCEEEECCCCCHHHHCCCHHCCHHH
ISFNQSPDIFFDRSINAYRGCEHGCVYCFARPTHAYHDLSPGLDFETQLFAKPNAAELLR
EECCCCCCEEEECCCCHHHCCCCCEEEEEECCCCCHHCCCCCCCCCHHEECCCCHHHHHH
ATLAKPKYAPRPIAMGTNTDPYQPIERKYRITREVLEVCLDARHPVTITTKSDRVLDDLD
HHHCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH
LLAEMARRRLVAVAISVTSLDPKLSTRLEPRTATPAKRLDALGKLADAGVPTHCSVAPVI
HHHHHHHHHHHHEEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH
PAITDRFMEEIVQRAAALGVPSVGWIPLRLPHEVSPLFREWLDVHFPERAGKVMSIVRSI
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RSGKDNDPNFFTRLRPTGVWDDLFRARFALACRRAGVKRHRFELDCSAFRRPEIDGQLRL
HCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCHHHEEECCHHHHCCCCCCCCEEE
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]