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The map label for this gene is 85374024

Identifier: 85374024

GI number: 85374024

Start: 1239427

End: 1239777

Strand: Direct

Name: 85374024

Synonym: ELI_05985

Alternate gene names: NA

Gene position: 1239427-1239777 (Clockwise)

Preceding gene: 85374023

Following gene: 85374025

Centisome position: 40.61

GC content: 64.39

Gene sequence:

>351_bases
TTGAAGCGCCAGATTGCCGAGCGCAGCGGCCGCGATGGTGAGAGGCGCGCCGCGCTGTGGTTGCGGGCGAAAGGTTGGTC
GATCCTTGCGCAGCGGGTCAAGACTCCGCGCGGCGAGATCGATCTGGTTGCCAAGCGCGGCAAGCTGGTCGCCTTCGTCG
AGGTTAAATGGCGCAAGACCAGAGCCGAACTCGACCATGCGATCGACGAATATCGGCTTTCACGGGTCGCTGCCGCGGCG
GAGGCGATCGCGCATGACTATGCGCAGGACGGCGAGGATTATCGCATCGACGTGATCCTCCTTGCACCCGGCAGCTTCCC
GCGCCACATCGCCAACGCCTGGCAACCTTAG

Upstream 100 bases:

>100_bases
CGCTCGAGACAATGAAGCCGTCACAGGCTGCGGGACATGTGGCAAAGGCTACCGGACTCGATCGAAAAGACCTCTATTCC
AGAGCCTTGGAGCTGAAAAC

Downstream 100 bases:

>100_bases
GAAAGAACATGGCCTTGAAAGTCGCCGTCCAGATGGACCCGATGGAAAGCATCAACATCGGTGGCGATTCCAGCTTCGCC
CTGATGCTGGCTGCGCAGGC

Product: endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MKRQIAERSGRDGERRAALWLRAKGWSILAQRVKTPRGEIDLVAKRGKLVAFVEVKWRKTRAELDHAIDEYRLSRVAAAA
EAIAHDYAQDGEDYRIDVILLAPGSFPRHIANAWQP

Sequences:

>Translated_116_residues
MKRQIAERSGRDGERRAALWLRAKGWSILAQRVKTPRGEIDLVAKRGKLVAFVEVKWRKTRAELDHAIDEYRLSRVAAAA
EAIAHDYAQDGEDYRIDVILLAPGSFPRHIANAWQP
>Mature_116_residues
MKRQIAERSGRDGERRAALWLRAKGWSILAQRVKTPRGEIDLVAKRGKLVAFVEVKWRKTRAELDHAIDEYRLSRVAAAA
EAIAHDYAQDGEDYRIDVILLAPGSFPRHIANAWQP

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y5985_ERYLH (Q2NAK2)

Other databases:

- EMBL:   CP000157
- RefSeq:   YP_458086.1
- ProteinModelPortal:   Q2NAK2
- STRING:   Q2NAK2
- GeneID:   3870748
- GenomeReviews:   CP000157_GR
- KEGG:   eli:ELI_05985
- NMPDR:   fig|314225.3.peg.1863
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   DIWLARQ
- BioCyc:   ELIT314225:ELI_05985-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13216; Mature: 13216

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRQIAERSGRDGERRAALWLRAKGWSILAQRVKTPRGEIDLVAKRGKLVAFVEVKWRKT
CCCCCCHHCCCCCCCEEEEEEEECCHHHHHHHHCCCCCCEEEEECCCCEEEEEEEEHHHH
RAELDHAIDEYRLSRVAAAAEAIAHDYAQDGEDYRIDVILLAPGSFPRHIANAWQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHCCCC
>Mature Secondary Structure
MKRQIAERSGRDGERRAALWLRAKGWSILAQRVKTPRGEIDLVAKRGKLVAFVEVKWRKT
CCCCCCHHCCCCCCCEEEEEEEECCHHHHHHHHCCCCCCEEEEECCCCEEEEEEEEHHHH
RAELDHAIDEYRLSRVAAAAEAIAHDYAQDGEDYRIDVILLAPGSFPRHIANAWQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA