Click here to switch to the map view.

The map label for this gene is celR [H]

Identifier: 85373465

GI number: 85373465

Start: 671683

End: 672699

Strand: Direct

Name: celR [H]

Synonym: ELI_03190

Alternate gene names: 85373465

Gene position: 671683-672699 (Clockwise)

Preceding gene: 85373464

Following gene: 85373468

Centisome position: 22.01

GC content: 67.35

Gene sequence:

>1017_bases
GTGAGCAGGGATGAGCGGCGACTGACGTCCTTCGATGTCGCAGCGAAAGCGGGCGTGTCGCAATCGACCGTCTCGCGCGC
GCTTTCCGGTTCCCCCACCATCACCGAAGCCACCCGTACTCGCGTGATCGAAGCCGCGCGCGAACTGGGCTATGTCGTCG
ACGAACGCGCCGCGCGGCTACGCAGCGGCAAGAGTAAGACCATCGCGGTCGTCGTCATCGGTCGGGCGGGGCAGGGCGCG
GCTAGCGTCAACCCGTTCTACTACTCCTTGCTCGGCAGCGTCTGCACGGCGGCGGCGCAGCGGGGCTATCAGGCGCTTGT
CTCGATCCAGTCCGAACCCGAGCACTTTTTCGGCCAGTTCATCGAGCGTGGTCAAGCCGATGCGGTGGTGGTGCTGGGCA
CCGCGACCAATCGCGAGGCCTGGCGCTATTTCGACGACTATCGCGAGACCCAGGCCAGAATGGCCTTCTGGGGCTCGCCC
TTCGACGGGCCAGGTTACGTCCGCTCCGATAACAAGGCCGGGGCACGCCTCGCCGTCGAACGTCTGGTGCAGGGCGGTTA
CAAGCGGATCGGCTTCATCGGCGAAACCGACGGCGCGCAGCGGCAGTTCCGCGAACGATACGAGGGCTATTGCGAGACGC
TGGAGGCCGCGGGCTTGCCGTGCTTCGACGCCGTCACCGCCAGTGGCGAGACGCGCGAGGCGCAAGGGGCGGGTGCGGTG
AAGGCGTTGTTGGCGCAGAAAACCGGCTACGACGCTGTATTTTCCGCCTGCGATGCCATGGCGCTGGGTGCGCTCACCGC
GCTGCGAGAGGCCGACAAATCCGTGCCCGGGGATTTCGGCGTGATCGGTTTCGACGGGCTTGGAGTCGGCGCGCATTCCT
CACCCCCGCTGACCACGATCGAGCCGGACTTTGCCGAGGCCGGGCTCAACCTCGTCGAAGCGGCGCTGGGCGGGGCCGAC
GAGGACCGCGACCGGCGCGTTTCGGTCCATCTTGTCGAACGCGCCAGCGCGCGCTGA

Upstream 100 bases:

>100_bases
GAATTTTCCGTCCTACGATCCCATCGCTTCCTGACACATTGACCGGACCGGGTATTTGCGGCCATTGAGCGGCCACAACA
CACTCGGGTGGGGATATAGC

Downstream 100 bases:

>100_bases
GCTTCTCCGTAGTCGAAAAAAAGGCCGCCCCGGAAAGAGCGGCCGCAGGTCTTGTGTTCTATTTTGCCGCTTAGAATTCG
GCCGAGATCGAGAAGCTGAA

Product: maltose transport gene repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSRDERRLTSFDVAAKAGVSQSTVSRALSGSPTITEATRTRVIEAARELGYVVDERAARLRSGKSKTIAVVVIGRAGQGA
ASVNPFYYSLLGSVCTAAAQRGYQALVSIQSEPEHFFGQFIERGQADAVVVLGTATNREAWRYFDDYRETQARMAFWGSP
FDGPGYVRSDNKAGARLAVERLVQGGYKRIGFIGETDGAQRQFRERYEGYCETLEAAGLPCFDAVTASGETREAQGAGAV
KALLAQKTGYDAVFSACDAMALGALTALREADKSVPGDFGVIGFDGLGVGAHSSPPLTTIEPDFAEAGLNLVEAALGGAD
EDRDRRVSVHLVERASAR

Sequences:

>Translated_338_residues
MSRDERRLTSFDVAAKAGVSQSTVSRALSGSPTITEATRTRVIEAARELGYVVDERAARLRSGKSKTIAVVVIGRAGQGA
ASVNPFYYSLLGSVCTAAAQRGYQALVSIQSEPEHFFGQFIERGQADAVVVLGTATNREAWRYFDDYRETQARMAFWGSP
FDGPGYVRSDNKAGARLAVERLVQGGYKRIGFIGETDGAQRQFRERYEGYCETLEAAGLPCFDAVTASGETREAQGAGAV
KALLAQKTGYDAVFSACDAMALGALTALREADKSVPGDFGVIGFDGLGVGAHSSPPLTTIEPDFAEAGLNLVEAALGGAD
EDRDRRVSVHLVERASAR
>Mature_337_residues
SRDERRLTSFDVAAKAGVSQSTVSRALSGSPTITEATRTRVIEAARELGYVVDERAARLRSGKSKTIAVVVIGRAGQGAA
SVNPFYYSLLGSVCTAAAQRGYQALVSIQSEPEHFFGQFIERGQADAVVVLGTATNREAWRYFDDYRETQARMAFWGSPF
DGPGYVRSDNKAGARLAVERLVQGGYKRIGFIGETDGAQRQFRERYEGYCETLEAAGLPCFDAVTASGETREAQGAGAVK
ALLAQKTGYDAVFSACDAMALGALTALREADKSVPGDFGVIGFDGLGVGAHSSPPLTTIEPDFAEAGLNLVEAALGGADE
DRDRRVSVHLVERASAR

Specific function: Binds to the 14-bp operator sequence 5'-TGGGAGCGCTCCCA- 3' in the upstream regions of cellulase genes; these operator sequences are modulated by cellobiose [H]

COG id: COG1609

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790194, Length=305, Percent_Identity=32.4590163934426, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1790369, Length=346, Percent_Identity=31.7919075144509, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI1788474, Length=329, Percent_Identity=29.7872340425532, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI1789068, Length=305, Percent_Identity=28.1967213114754, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1787906, Length=281, Percent_Identity=32.0284697508897, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1789202, Length=299, Percent_Identity=29.7658862876254, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1787948, Length=337, Percent_Identity=25.2225519287834, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787580, Length=282, Percent_Identity=23.4042553191489, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1790689, Length=310, Percent_Identity=24.8387096774194, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786540, Length=312, Percent_Identity=26.6025641025641, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 36027; Mature: 35895

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRDERRLTSFDVAAKAGVSQSTVSRALSGSPTITEATRTRVIEAARELGYVVDERAARL
CCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSGKSKTIAVVVIGRAGQGAASVNPFYYSLLGSVCTAAAQRGYQALVSIQSEPEHFFGQF
HCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IERGQADAVVVLGTATNREAWRYFDDYRETQARMAFWGSPFDGPGYVRSDNKAGARLAVE
HHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHH
RLVQGGYKRIGFIGETDGAQRQFRERYEGYCETLEAAGLPCFDAVTASGETREAQGAGAV
HHHHCCHHHCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHH
KALLAQKTGYDAVFSACDAMALGALTALREADKSVPGDFGVIGFDGLGVGAHSSPPLTTI
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCC
EPDFAEAGLNLVEAALGGADEDRDRRVSVHLVERASAR
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure 
SRDERRLTSFDVAAKAGVSQSTVSRALSGSPTITEATRTRVIEAARELGYVVDERAARL
CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSGKSKTIAVVVIGRAGQGAASVNPFYYSLLGSVCTAAAQRGYQALVSIQSEPEHFFGQF
HCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IERGQADAVVVLGTATNREAWRYFDDYRETQARMAFWGSPFDGPGYVRSDNKAGARLAVE
HHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHH
RLVQGGYKRIGFIGETDGAQRQFRERYEGYCETLEAAGLPCFDAVTASGETREAQGAGAV
HHHHCCHHHCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHH
KALLAQKTGYDAVFSACDAMALGALTALREADKSVPGDFGVIGFDGLGVGAHSSPPLTTI
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCC
EPDFAEAGLNLVEAALGGADEDRDRRVSVHLVERASAR
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10224066 [H]