| Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
|---|---|
| Accession | NC_007722 |
| Length | 3,052,398 |
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The map label for this gene is dinG [H]
Identifier: 85373413
GI number: 85373413
Start: 618289
End: 621039
Strand: Direct
Name: dinG [H]
Synonym: ELI_02930
Alternate gene names: 85373413
Gene position: 618289-621039 (Clockwise)
Preceding gene: 85373412
Following gene: 85373414
Centisome position: 20.26
GC content: 69.14
Gene sequence:
>2751_bases ATGCCCGCTATCCCCCTTCCAGCGCTGCATGCGAGCCATGCCGGGACGTGGCTGCGCGAGGCCAATCGCGATACGCAATC CTGCTCGAAGGGCGAGGCGATCAATGCAGCGGCGGACACGCCGGTGCTCATGCTCAACGCGCCTTTGGTGGCGACGCGGC TGGGCTATCCCGACCTGTCGGGGCTCGACCTGCTCGAGCTTTTCGCCTTCGTCCATCCGGCCAAATTCTGCGTGCCGACG CCCAAGGGGCTGGCCCATGCGCTCGACCTCGAGGAACCAGCGGGCGACGATGCCGTCCCCGAATTGCTGCAAAGAGCGGC GGGCAAGCTGCTGGAAACCTGCGAAAGTTCCGAATGGGCCGAGCGCGAAGGCGCGTGGAGCGTGCTGCAATCGCTCGCCC GATTGCGCTGGCCGTGGGCGGGGGTGCTCGCGCCGCACGTGGCCAAGCCGGAGCGCGCGGAAAAATGGCTGTTCAGCCGC CTGCCCGAATGGGAGGAGGTGCCCGAGCGCCCGCAGCCCGCACAGGTCAATCTGGCCGAAGCCGAAGTCGAGGCTCAGCT CGCACGACTCACCGGCGAAGGCGCGGAAAAGCGCGACGGCCAGCGCGCCTATGCAAAAGATGTCGGCGGCGTGTTCGCCC CAAGGGAGAAGCGCAAGCAGCCGCATGTCCTGCTCGCGCAGGCGGGCACCGGGATCGGCAAGACGCTGGGCTATCTCGCG CCTGCTTCGCTGTGGGCGGACAAGGCGCAGGGCACCGTCTGGGTCAGCACCTATACCAAGAATCTGCAGCGGCAACTGCG GGGCGAGAGCCGCCGCGCCTGGCCTTCGCGCCGCGCAGACGGTTCGCGCCCGGTCGTCGTGCGCAAGGGGCGCGAGAACT ATCTCTGCCTGCTGAACCTGGAAGACGCGCTGCAGGGCGGCTTCGCAGGTCGCCCGGCGGTGCTGGCGCAGCTTGTCGCG CGCTGGGCCGCTTACAGCGCCGATGGCGACATGATCGGCGGGGACCTGCCCGGCTGGCTCGGCACGCTGTTCCGCAAGCG CGGGATCACGGCGCTGACCGACCAGCGCGGCGAATGCATCTATGCTGGCTGCCCGCATTACCGCAAATGCTTCATCGAGC GCGCGACGCGGGCCAGCGCGCAGGCCGATCTGGTCATCGCCAATCACGCGCTGGTGATGATCAACGCCGCCCGCGGTCGC CACCACGGCCAGCCGCCGACGCGCATCCTGTTCGACGAAGGCCACCATGTCTTCGATGCCGCCGACAGCACCTTCGCCGC CGCGCTGACCGGGCAGGAGGCGATCGAGCTACGGCGCTGGATCATCGGCCCGGAAAAAGGCAATCGCGGACGGAGACGAG GTCTCGCCGCGCGGTTGGCGGACGTGGCCAGTTACGATGACGCGGGCGGCGAAGCGGTCGAGGCTGCGGTCGAGGCGGCG CAGAACCTGCCGTCCGACGGCTGGATCGCGCGGCTCGTCGAAGGCACGCCCTTCGGCCCGGTCGAAGCGCTGCTGGGGCA GGTCCGCGCGCTCACCTATGCCCGCGACGAGAGCGGGGCGCAGGACGCGGGCTACGGGATCGAAACCGAAGTCGCCTCGC TGCCGGGGCCATTGATCGAAGCGGCGCAGGATGCGCAGGTCGCGCTCGCCGCCATTCGCAGCCCGCTGATGACGCTCGGC GGGCGGCTGGAGGCAGTGCTGGAGGACGCGCCCGACTGGCTCGACGGGCAGGGCCGGGCGCGGATAGAAGGCGCGCGGCA TTCGCTGCGCTGGCGGATCGATTTGCTGGCGGCGTGGGAATCGCTGCTCGCGCGGCTGGGCGGCCCGGCTGACCCGGATT TCGTCGACTGGTTTGCGGTCGACCGCAACGAAGCGCGCGAATTCGATATCGGCATTCATCGCCACTGGCTCGATCCGATG AAACCCTTTGCGCATGTCGTGCTGGAGCCTGCGCATGGTGTCATGCTGACCAGCGCGACGCTGACCGATCGCGGCGAGAC GGGGGAGGACTGGCAGGGTGCCATCGCCGCCAGCGGCGCGCCGCATATCGAACTGCAACCCAAGACCAGCAGCGCGCAAA GCCCGTTCGATTATGCCAGCCGCGCCGAAGTGCTGATCGTCACCGATATCAAGCGTGGCGATCTCGCAGCACTGGCGGGC GGCTACGCGCGTATCGTCGAGGCGGCGGGGGGCGGCGTGCTCGGACTGTTCACCGCGATCAAGCGATTGCGCGCGGTCTA TGGCCGCATCGCCGACCGGCTCGCGCGCGCCGGGCTGCCGCTCTATGCGCAGCACGTCGATCCGATCGATACGGGCACGC TGACCGACATTTTCCGCGACGATCGCAAGGCCAGCCTGCTCGGCACCGATGCGTTGCGCGACGGGGTCGATGTGCCGGGG GAATCACTGCGCTGCGTGGTGCTGGAAGCGGTGCCATGGCCGCGCCCCACGATCCTCCACCGCGCCCGCCGTGCAGCCAA TGGCGGCGGGGCCTATGACGACCGCCTGATCCGCGCGCGGCTGGCGCAGGCATTCGGGCGGTTGATCCGCAGCCGCGAGG ACGCCGGACATTTCATCGTCCTGTCCTCCGCTTTCCCGAGCCGCTTGCTCAGTGCCTTCCCGCCCGGCACGCCGGTCACG CGGCTGACGCTCGATGGAGCGCTGGAACGGGTTGCGGCGGGGCCGCCAAACGCCGATAGGGCTAAGGAAGTCGCAGGCAC ACTGCCGCGAGAGGAAACGCCGGATATATGA
Upstream 100 bases:
>100_bases ATTGTCTTTCCGACCAGGTGGCCTGAGACCCCAGCCTTCGCTGGGGCTCGCGCTTCGCCGAGTGTTTACTTTTCGTTCTC CTCACGCGATGAGATGAGCG
Downstream 100 bases:
>100_bases AAACGCGCCTATGAAAACCTTGGGCCTGCTGCGCCACGCCAAGTCGGACTGGGACGATATGTCCAAGCGCGATTTCGACC GCGGGCTCAACGCGCGCGGG
Product: DNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 916; Mature: 915
Protein sequence:
>916_residues MPAIPLPALHASHAGTWLREANRDTQSCSKGEAINAAADTPVLMLNAPLVATRLGYPDLSGLDLLELFAFVHPAKFCVPT PKGLAHALDLEEPAGDDAVPELLQRAAGKLLETCESSEWAEREGAWSVLQSLARLRWPWAGVLAPHVAKPERAEKWLFSR LPEWEEVPERPQPAQVNLAEAEVEAQLARLTGEGAEKRDGQRAYAKDVGGVFAPREKRKQPHVLLAQAGTGIGKTLGYLA PASLWADKAQGTVWVSTYTKNLQRQLRGESRRAWPSRRADGSRPVVVRKGRENYLCLLNLEDALQGGFAGRPAVLAQLVA RWAAYSADGDMIGGDLPGWLGTLFRKRGITALTDQRGECIYAGCPHYRKCFIERATRASAQADLVIANHALVMINAARGR HHGQPPTRILFDEGHHVFDAADSTFAAALTGQEAIELRRWIIGPEKGNRGRRRGLAARLADVASYDDAGGEAVEAAVEAA QNLPSDGWIARLVEGTPFGPVEALLGQVRALTYARDESGAQDAGYGIETEVASLPGPLIEAAQDAQVALAAIRSPLMTLG GRLEAVLEDAPDWLDGQGRARIEGARHSLRWRIDLLAAWESLLARLGGPADPDFVDWFAVDRNEAREFDIGIHRHWLDPM KPFAHVVLEPAHGVMLTSATLTDRGETGEDWQGAIAASGAPHIELQPKTSSAQSPFDYASRAEVLIVTDIKRGDLAALAG GYARIVEAAGGGVLGLFTAIKRLRAVYGRIADRLARAGLPLYAQHVDPIDTGTLTDIFRDDRKASLLGTDALRDGVDVPG ESLRCVVLEAVPWPRPTILHRARRAANGGGAYDDRLIRARLAQAFGRLIRSREDAGHFIVLSSAFPSRLLSAFPPGTPVT RLTLDGALERVAAGPPNADRAKEVAGTLPREETPDI
Sequences:
>Translated_916_residues MPAIPLPALHASHAGTWLREANRDTQSCSKGEAINAAADTPVLMLNAPLVATRLGYPDLSGLDLLELFAFVHPAKFCVPT PKGLAHALDLEEPAGDDAVPELLQRAAGKLLETCESSEWAEREGAWSVLQSLARLRWPWAGVLAPHVAKPERAEKWLFSR LPEWEEVPERPQPAQVNLAEAEVEAQLARLTGEGAEKRDGQRAYAKDVGGVFAPREKRKQPHVLLAQAGTGIGKTLGYLA PASLWADKAQGTVWVSTYTKNLQRQLRGESRRAWPSRRADGSRPVVVRKGRENYLCLLNLEDALQGGFAGRPAVLAQLVA RWAAYSADGDMIGGDLPGWLGTLFRKRGITALTDQRGECIYAGCPHYRKCFIERATRASAQADLVIANHALVMINAARGR HHGQPPTRILFDEGHHVFDAADSTFAAALTGQEAIELRRWIIGPEKGNRGRRRGLAARLADVASYDDAGGEAVEAAVEAA QNLPSDGWIARLVEGTPFGPVEALLGQVRALTYARDESGAQDAGYGIETEVASLPGPLIEAAQDAQVALAAIRSPLMTLG GRLEAVLEDAPDWLDGQGRARIEGARHSLRWRIDLLAAWESLLARLGGPADPDFVDWFAVDRNEAREFDIGIHRHWLDPM KPFAHVVLEPAHGVMLTSATLTDRGETGEDWQGAIAASGAPHIELQPKTSSAQSPFDYASRAEVLIVTDIKRGDLAALAG GYARIVEAAGGGVLGLFTAIKRLRAVYGRIADRLARAGLPLYAQHVDPIDTGTLTDIFRDDRKASLLGTDALRDGVDVPG ESLRCVVLEAVPWPRPTILHRARRAANGGGAYDDRLIRARLAQAFGRLIRSREDAGHFIVLSSAFPSRLLSAFPPGTPVT RLTLDGALERVAAGPPNADRAKEVAGTLPREETPDI >Mature_915_residues PAIPLPALHASHAGTWLREANRDTQSCSKGEAINAAADTPVLMLNAPLVATRLGYPDLSGLDLLELFAFVHPAKFCVPTP KGLAHALDLEEPAGDDAVPELLQRAAGKLLETCESSEWAEREGAWSVLQSLARLRWPWAGVLAPHVAKPERAEKWLFSRL PEWEEVPERPQPAQVNLAEAEVEAQLARLTGEGAEKRDGQRAYAKDVGGVFAPREKRKQPHVLLAQAGTGIGKTLGYLAP ASLWADKAQGTVWVSTYTKNLQRQLRGESRRAWPSRRADGSRPVVVRKGRENYLCLLNLEDALQGGFAGRPAVLAQLVAR WAAYSADGDMIGGDLPGWLGTLFRKRGITALTDQRGECIYAGCPHYRKCFIERATRASAQADLVIANHALVMINAARGRH HGQPPTRILFDEGHHVFDAADSTFAAALTGQEAIELRRWIIGPEKGNRGRRRGLAARLADVASYDDAGGEAVEAAVEAAQ NLPSDGWIARLVEGTPFGPVEALLGQVRALTYARDESGAQDAGYGIETEVASLPGPLIEAAQDAQVALAAIRSPLMTLGG RLEAVLEDAPDWLDGQGRARIEGARHSLRWRIDLLAAWESLLARLGGPADPDFVDWFAVDRNEAREFDIGIHRHWLDPMK PFAHVVLEPAHGVMLTSATLTDRGETGEDWQGAIAASGAPHIELQPKTSSAQSPFDYASRAEVLIVTDIKRGDLAALAGG YARIVEAAGGGVLGLFTAIKRLRAVYGRIADRLARAGLPLYAQHVDPIDTGTLTDIFRDDRKASLLGTDALRDGVDVPGE SLRCVVLEAVPWPRPTILHRARRAANGGGAYDDRLIRARLAQAFGRLIRSREDAGHFIVLSSAFPSRLLSAFPPGTPVTR LTLDGALERVAAGPPNADRAKEVAGTLPREETPDI
Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788110, Length=269, Percent_Identity=32.3420074349442, Blast_Score=103, Evalue=7e-23, Organism=Escherichia coli, GI1787018, Length=242, Percent_Identity=29.7520661157025, Blast_Score=71, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR006054 - InterPro: IPR006310 - InterPro: IPR006055 - InterPro: IPR013520 - InterPro: IPR014013 - InterPro: IPR006555 - InterPro: IPR001650 - InterPro: IPR006935 - InterPro: IPR012337 [H]
Pfam domain/function: PF00929 Exonuc_X-T; PF04851 ResIII [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 98934; Mature: 98803
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAIPLPALHASHAGTWLREANRDTQSCSKGEAINAAADTPVLMLNAPLVATRLGYPDLS CCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEECCCHHHHCCCCCCCC GLDLLELFAFVHPAKFCVPTPKGLAHALDLEEPAGDDAVPELLQRAAGKLLETCESSEWA CHHHHHHHHHHCCHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH EREGAWSVLQSLARLRWPWAGVLAPHVAKPERAEKWLFSRLPEWEEVPERPQPAQVNLAE HHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCEEHHH AEVEAQLARLTGEGAEKRDGQRAYAKDVGGVFAPREKRKQPHVLLAQAGTGIGKTLGYLA HHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHCCCCCEEEEECCCCHHHHHHHHH PASLWADKAQGTVWVSTYTKNLQRQLRGESRRAWPSRRADGSRPVVVRKGRENYLCLLNL HHHHHHHCCCCEEEEHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEECCCCCEEEEEEC EDALQGGFAGRPAVLAQLVARWAAYSADGDMIGGDLPGWLGTLFRKRGITALTDQRGECI HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCEE YAGCPHYRKCFIERATRASAQADLVIANHALVMINAARGRHHGQPPTRILFDEGHHVFDA EECCCHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCCCCCCCCCEEEECCCCEEEEC ADSTFAAALTGQEAIELRRWIIGPEKGNRGRRRGLAARLADVASYDDAGGEAVEAAVEAA CCCHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH QNLPSDGWIARLVEGTPFGPVEALLGQVRALTYARDESGAQDAGYGIETEVASLPGPLIE HCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHH AAQDAQVALAAIRSPLMTLGGRLEAVLEDAPDWLDGQGRARIEGARHSLRWRIDLLAAWE HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHCCHHHHHHHHHHHHHH SLLARLGGPADPDFVDWFAVDRNEAREFDIGIHRHWLDPMKPFAHVVLEPAHGVMLTSAT HHHHHHCCCCCCCCEEEEEECCCCCCHHCCCHHHHHCCHHHHHHHHHCCCCCCEEEEEEE LTDRGETGEDWQGAIAASGAPHIELQPKTSSAQSPFDYASRAEVLIVTDIKRGDLAALAG ECCCCCCCCCCCCCEECCCCCCEEECCCCCCCCCCCCHHCCCCEEEEEECCCCCHHHHHC GYARIVEAAGGGVLGLFTAIKRLRAVYGRIADRLARAGLPLYAQHVDPIDTGTLTDIFRD HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHC DRKASLLGTDALRDGVDVPGESLRCVVLEAVPWPRPTILHRARRAANGGGAYDDRLIRAR CCHHHHHCCHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH LAQAFGRLIRSREDAGHFIVLSSAFPSRLLSAFPPGTPVTRLTLDGALERVAAGPPNADR HHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCHHH AKEVAGTLPREETPDI HHHHHHCCCCCCCCCC >Mature Secondary Structure PAIPLPALHASHAGTWLREANRDTQSCSKGEAINAAADTPVLMLNAPLVATRLGYPDLS CCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEECCCHHHHCCCCCCCC GLDLLELFAFVHPAKFCVPTPKGLAHALDLEEPAGDDAVPELLQRAAGKLLETCESSEWA CHHHHHHHHHHCCHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH EREGAWSVLQSLARLRWPWAGVLAPHVAKPERAEKWLFSRLPEWEEVPERPQPAQVNLAE HHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCEEHHH AEVEAQLARLTGEGAEKRDGQRAYAKDVGGVFAPREKRKQPHVLLAQAGTGIGKTLGYLA HHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHCCCCCEEEEECCCCHHHHHHHHH PASLWADKAQGTVWVSTYTKNLQRQLRGESRRAWPSRRADGSRPVVVRKGRENYLCLLNL HHHHHHHCCCCEEEEHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEECCCCCEEEEEEC EDALQGGFAGRPAVLAQLVARWAAYSADGDMIGGDLPGWLGTLFRKRGITALTDQRGECI HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCEE YAGCPHYRKCFIERATRASAQADLVIANHALVMINAARGRHHGQPPTRILFDEGHHVFDA EECCCHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCCCCCCCCCEEEECCCCEEEEC ADSTFAAALTGQEAIELRRWIIGPEKGNRGRRRGLAARLADVASYDDAGGEAVEAAVEAA CCCHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH QNLPSDGWIARLVEGTPFGPVEALLGQVRALTYARDESGAQDAGYGIETEVASLPGPLIE HCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHH AAQDAQVALAAIRSPLMTLGGRLEAVLEDAPDWLDGQGRARIEGARHSLRWRIDLLAAWE HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHCCHHHHHHHHHHHHHH SLLARLGGPADPDFVDWFAVDRNEAREFDIGIHRHWLDPMKPFAHVVLEPAHGVMLTSAT HHHHHHCCCCCCCCEEEEEECCCCCCHHCCCHHHHHCCHHHHHHHHHCCCCCCEEEEEEE LTDRGETGEDWQGAIAASGAPHIELQPKTSSAQSPFDYASRAEVLIVTDIKRGDLAALAG ECCCCCCCCCCCCCEECCCCCCEEECCCCCCCCCCCCHHCCCCEEEEEECCCCCHHHHHC GYARIVEAAGGGVLGLFTAIKRLRAVYGRIADRLARAGLPLYAQHVDPIDTGTLTDIFRD HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHC DRKASLLGTDALRDGVDVPGESLRCVVLEAVPWPRPTILHRARRAANGGGAYDDRLIRAR CCHHHHHCCHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH LAQAFGRLIRSREDAGHFIVLSSAFPSRLLSAFPPGTPVTRLTLDGALERVAAGPPNADR HHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCHHH AKEVAGTLPREETPDI HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]