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The map label for this gene is rmuC [H]

Identifier: 85373245

GI number: 85373245

Start: 461019

End: 462476

Strand: Direct

Name: rmuC [H]

Synonym: ELI_02090

Alternate gene names: 85373245

Gene position: 461019-462476 (Clockwise)

Preceding gene: 85373243

Following gene: 85373246

Centisome position: 15.1

GC content: 63.24

Gene sequence:

>1458_bases
ATGGATCGGTGGAATGGTTCCGGCGGGCGGCTTGGCTTGCACGTGCGTTCCGACTATGTTCCGCCGATGGATCCCGCACT
TCTCATAATCCTCACTCTTGTCCTCGGTCTCGCGATCGGAGGAGGGATCGGCTGGTACGTCGGTTCGCGTCCTGTCGCCG
ACTTGCGTGCGCGCTTCGATGAGCGCGACGCCGAGGCGAAGAAATATGCCGACGACGTGGCGAGGATGGCGCCGGAGCTT
GCGACCATGTCCGACCGGGCCAGGCGGGCCGACGCATTGGCCGAGACGCTGGACCACACCCGCGAAGAGTTGACCGCGCT
GAAAGCCCAGGCAGCGGGTTTTGCGGAGCAGAAGCGCCTGCTGGAGGAAAGCCGCGAGAAGCTGCTCAAGGAGTTCGAGA
ACACCGGCGCGCAGGTGCTGGGCAAGGCGCAGGAGGCGTTTCTCGCCCGCGCCAACGAGCGCTTCGGCCACTCGGAGAAG
GCCAGTGCGGAGAAACTCGCCGCGCTGCTCAAGCCGGTCGACGAGCGATTGAAGAAATACGAGGAGCAGGTCGAGACGCT
GGAAAACCAGCGCAAGGATGCGTTCGGCCAGTTGCACGGTCTGATCGAAAACATGCAGCGCGGGCAGGAAGAGGTTCGGC
GCGAAGCGCAGCGGCTCGGCAATTCGCTGACCAACGCGCCCAAGGCGCGCGGACGCTGGGGGGAGCGGGCGTTGCAGAAC
GTGCTCGAGCAGTGCGGCTTGGCCGAGCATACGGACTTCCACCTCGAACAGTCGATGGACACCGAGAGCGGTCGCCTGCG
CCCCGATGCCATCGTCAACGTACCCGGGCAGAAGAAGCTGGTGATCGATGCGAAGGTTTCGCTCAACGCCTATCAGGAAG
CGTTCGAGGCCGATGACGACGACGCCCGCAAGCGGCACCTCGACCTGCACGCGAAATCCATGCGCAACCATGTCCAGACG
CTCGGCTCGAAAGGGTATCAGAACCAGTTCGAGGAAGCGCCGGATTACGTGGTGATGTTCGTTCCGGGCGAACATTTCGT
CGCCGCTGCACTCGAACACGATCCCGAATTGTGGGATTTCGCCTTCCACAACAAAGTGCTGCTGGCGACGCCGACCAACC
TTGTCGCTATTGCGCGAACCGTCGCGCAGGTGTGGCGGCAGGACAAGATGGCGGCTGAGGCTCAGGAAATCGGTCGCATG
GGTGCGGAGCTCTACGACCGTCTGCGCGTTGCGGGCGAACATATGAAGCGCGTCGGCGGCGGGCTCGAAACGGCCGTTGC
GAACTACAACAAGTTCGTCGGGAGTTTCGAACGCAATGTCCTCACCTCCGGCCGACGCATGGCCGAGAAAGGTCTCGAGA
TCGGCAAGGAAATCGAAGAGGTCCCGCTGGTCGAAGGCGCACCGCGCTACACGGATGACGACCTTCTGACCGACGGGAGC
GAGGAAGCTGCCGAGTAA

Upstream 100 bases:

>100_bases
CGCTTCGCCCAACGCTTCGTTCCAGTCGGCCCCGACCTGCGGATGTTCCCTGATCATTTCCTTGATCGACATGATGAAAT
CTCCTTCATGAAGGGAGCGC

Downstream 100 bases:

>100_bases
CGCGATGGGCCACCATAGTGGCGGTTTTCCTCGCGCTGGCTGCACCAGCGCAGGCCTGACATCTCTATCCGCGCAACGAA
TGGTTTGGCCATGGCGGGGC

Product: DNA recombination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MDRWNGSGGRLGLHVRSDYVPPMDPALLIILTLVLGLAIGGGIGWYVGSRPVADLRARFDERDAEAKKYADDVARMAPEL
ATMSDRARRADALAETLDHTREELTALKAQAAGFAEQKRLLEESREKLLKEFENTGAQVLGKAQEAFLARANERFGHSEK
ASAEKLAALLKPVDERLKKYEEQVETLENQRKDAFGQLHGLIENMQRGQEEVRREAQRLGNSLTNAPKARGRWGERALQN
VLEQCGLAEHTDFHLEQSMDTESGRLRPDAIVNVPGQKKLVIDAKVSLNAYQEAFEADDDDARKRHLDLHAKSMRNHVQT
LGSKGYQNQFEEAPDYVVMFVPGEHFVAAALEHDPELWDFAFHNKVLLATPTNLVAIARTVAQVWRQDKMAAEAQEIGRM
GAELYDRLRVAGEHMKRVGGGLETAVANYNKFVGSFERNVLTSGRRMAEKGLEIGKEIEEVPLVEGAPRYTDDDLLTDGS
EEAAE

Sequences:

>Translated_485_residues
MDRWNGSGGRLGLHVRSDYVPPMDPALLIILTLVLGLAIGGGIGWYVGSRPVADLRARFDERDAEAKKYADDVARMAPEL
ATMSDRARRADALAETLDHTREELTALKAQAAGFAEQKRLLEESREKLLKEFENTGAQVLGKAQEAFLARANERFGHSEK
ASAEKLAALLKPVDERLKKYEEQVETLENQRKDAFGQLHGLIENMQRGQEEVRREAQRLGNSLTNAPKARGRWGERALQN
VLEQCGLAEHTDFHLEQSMDTESGRLRPDAIVNVPGQKKLVIDAKVSLNAYQEAFEADDDDARKRHLDLHAKSMRNHVQT
LGSKGYQNQFEEAPDYVVMFVPGEHFVAAALEHDPELWDFAFHNKVLLATPTNLVAIARTVAQVWRQDKMAAEAQEIGRM
GAELYDRLRVAGEHMKRVGGGLETAVANYNKFVGSFERNVLTSGRRMAEKGLEIGKEIEEVPLVEGAPRYTDDDLLTDGS
EEAAE
>Mature_485_residues
MDRWNGSGGRLGLHVRSDYVPPMDPALLIILTLVLGLAIGGGIGWYVGSRPVADLRARFDERDAEAKKYADDVARMAPEL
ATMSDRARRADALAETLDHTREELTALKAQAAGFAEQKRLLEESREKLLKEFENTGAQVLGKAQEAFLARANERFGHSEK
ASAEKLAALLKPVDERLKKYEEQVETLENQRKDAFGQLHGLIENMQRGQEEVRREAQRLGNSLTNAPKARGRWGERALQN
VLEQCGLAEHTDFHLEQSMDTESGRLRPDAIVNVPGQKKLVIDAKVSLNAYQEAFEADDDDARKRHLDLHAKSMRNHVQT
LGSKGYQNQFEEAPDYVVMFVPGEHFVAAALEHDPELWDFAFHNKVLLATPTNLVAIARTVAQVWRQDKMAAEAQEIGRM
GAELYDRLRVAGEHMKRVGGGLETAVANYNKFVGSFERNVLTSGRRMAEKGLEIGKEIEEVPLVEGAPRYTDDDLLTDGS
EEAAE

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=464, Percent_Identity=31.25, Blast_Score=189, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 54118; Mature: 54118

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRWNGSGGRLGLHVRSDYVPPMDPALLIILTLVLGLAIGGGIGWYVGSRPVADLRARFD
CCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHH
ERDAEAKKYADDVARMAPELATMSDRARRADALAETLDHTREELTALKAQAAGFAEQKRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
LEESREKLLKEFENTGAQVLGKAQEAFLARANERFGHSEKASAEKLAALLKPVDERLKKY
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
EEQVETLENQRKDAFGQLHGLIENMQRGQEEVRREAQRLGNSLTNAPKARGRWGERALQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
VLEQCGLAEHTDFHLEQSMDTESGRLRPDAIVNVPGQKKLVIDAKVSLNAYQEAFEADDD
HHHHCCCCCCCCHHHHHCCCCCCCCCCCCCEEECCCCCEEEEEEHHHHHHHHHHHCCCCH
DARKRHLDLHAKSMRNHVQTLGSKGYQNQFEEAPDYVVMFVPGEHFVAAALEHDPELWDF
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCHHHH
AFHNKVLLATPTNLVAIARTVAQVWRQDKMAAEAQEIGRMGAELYDRLRVAGEHMKRVGG
HHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GLETAVANYNKFVGSFERNVLTSGRRMAEKGLEIGKEIEEVPLVEGAPRYTDDDLLTDGS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCC
EEAAE
HHCCC
>Mature Secondary Structure
MDRWNGSGGRLGLHVRSDYVPPMDPALLIILTLVLGLAIGGGIGWYVGSRPVADLRARFD
CCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHH
ERDAEAKKYADDVARMAPELATMSDRARRADALAETLDHTREELTALKAQAAGFAEQKRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
LEESREKLLKEFENTGAQVLGKAQEAFLARANERFGHSEKASAEKLAALLKPVDERLKKY
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
EEQVETLENQRKDAFGQLHGLIENMQRGQEEVRREAQRLGNSLTNAPKARGRWGERALQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
VLEQCGLAEHTDFHLEQSMDTESGRLRPDAIVNVPGQKKLVIDAKVSLNAYQEAFEADDD
HHHHCCCCCCCCHHHHHCCCCCCCCCCCCCEEECCCCCEEEEEEHHHHHHHHHHHCCCCH
DARKRHLDLHAKSMRNHVQTLGSKGYQNQFEEAPDYVVMFVPGEHFVAAALEHDPELWDF
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCHHHH
AFHNKVLLATPTNLVAIARTVAQVWRQDKMAAEAQEIGRMGAELYDRLRVAGEHMKRVGG
HHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GLETAVANYNKFVGSFERNVLTSGRRMAEKGLEIGKEIEEVPLVEGAPRYTDDDLLTDGS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCC
EEAAE
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA