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The map label for this gene is viuA [H]

Identifier: 85373027

GI number: 85373027

Start: 236121

End: 238175

Strand: Direct

Name: viuA [H]

Synonym: ELI_01000

Alternate gene names: 85373027

Gene position: 236121-238175 (Clockwise)

Preceding gene: 85373026

Following gene: 85373033

Centisome position: 7.74

GC content: 55.77

Gene sequence:

>2055_bases
TTGTCTGACGTCATCATTGTGACGGCGACCAAGAAGGGGTACGGCGAAAACCTGCAGAATGTGCCTGTCGCGGTGACCGC
ATTTGGCGAAGCGCAGCTCGATGCGAAATTCGTGCAAAACCTTCAAAGCTTGAGCTACGATGTCCCCAACGTCCAGCTCG
AGGGTGTCGGAACGGCTCCAGGCTACGCAAACTTCACGATCCGCGGACTGGGCATCAATAGTACCGTCCCTTCCATCGAC
CCGACGGTTGGCGTCTTTACCGACGGAATCTATCTTGGGATCAATGCAGGCGTTGTGCTCGACAATTTCGATCTCGAGGG
GATCGAGGTGTTGCGCGGCCCGCAGGGACTTCTTTTCGGCCGCAATGTAACGGCTGGGGCGGTCGTGATGCGGACGACGC
GCCCGGATTTCAATTTCAGGGCCAGTGCCAAGGCATCGGTGGAAACCGGTCTGAAGAAAACCGTCAGTGCAATGGTCACA
GGACCGATCGCTGAGGACGTCCTGGCCGCAAAGTTGGCCGTCTACTACAGCAAGGATGAGGGATGGTTCCGCAATCAGTT
TGATCAAAGCAGCTTTGGCAAATCCCGCGACATCATCATTCGCCCCGCGCTTAGCGTAAAGGGCGGCGACAACTTCCGGA
TGGATCTGCGCTATGAGCACGGCGACATTGATGGCGATGGCGCGCCAGTGCAGAGTCACGCGATTTTCCCGCGCGACACG
TTTGGAATATCGATCGATTTTCCGGGGTACTATAATGCGACCTGGAATCAAGCAATCGCAGAGACCAACATCGATGTCGG
CCTTGGAGACGGTGTGATAACCAACATCATGGGTTATCGGCAATTTCGGTCGAGGGCTGCCAGCGATATTGACGGGACGC
CACAGCATTTTTTCAACGGCTACTTTAACATCAATCAAGAACAGATCAGCGATGAACTGCGTTATTCAGGAAAGATCGGC
GCCGTCGAGGTGACAACCGGGCTATATTACTTCGCGCAGGACCTGGCATACGCAGAGCAACGCGACCTTTTGGGCGGTGC
GAGGATCGTATCGGGTGGCGGGACTCAAGACCAAACAACCTGGGGAGCGTTCGCGTCAGCTGACTGGCATTTCAGCAATA
CGCTCACGCTCAATATCGGCGGGCGATACAGTTGGGAACGCAAGGCCGTGCGCATCGCACCGCTGGGTGCAAATGGGTGT
GACGTGAACACGTTGCGCTGTGCCACGAACTTCATCGATGACGAAAGCTGGAAAAGCTTTACTCCGAAGCTTGGGCTACA
ATGGCAGCCGGATAATCAAACCCAAATCTATGGCTTCTATACCCGCGGCTTCCGCAGCGGTGGCTACAATTTGCGCAATA
CCGATCCCGGTGTTCCGCCCGGCCCCTTCGATCAGGAAACGCAGGACAGCTTCGAGATAGGCGCGAAGAAGCAGTTCGGA
AGAAGCCGCCTCAACATCGCCTCGTTCTACAACCAGATGAAGAACCTCCAACGCGAAATCAACCTCCCGGGCCCGCTGGG
AGTCAGCCAAGTGATCCGCAATACGGCGGATGCAACAATCACGGGCTTCGAAGCGGAAGGCCAGTTCTTCATTATGCCAA
ATCTGGTGCTCTCAGGACAGGTTGGCTATGTTCACGGGAAATATCGCAATATCCAGTTTGACATAAGCGGCGATGGCGTC
ATCAACGATGTAGATCGCGACCTGAAGCTTCCCAGGCTTTCACCGTGGACCTATGGTGCCGGGCTGACCTACGATCAGAC
ACTCGGCTCAGCAGGTACTGCAACGGCCCGCATAGACTTCACTCATCGTGACAGTGCCCGGTTCACTGACAATAATGCTG
GGTTTCTGTCGCCAGCAGACATGCTCGATGCAAGTCTGACATACAAAACCGCGGACCAGATCTGGCGCTTTTCGGTTTAT
GGGCGCAATCTACTCAACGAGGTTACATATGGCGGTGATACGCCGTTGCCAGCCGCGTTCGGTGGCCCAGGCGCCAGCTT
GTCACCCCTGAATAAGGGTCGGACGATCGGCGGAGAAGTGGCGCTGAGTTTCTAG

Upstream 100 bases:

>100_bases
CTTGGTCTGGTCCGGGCCAGCGTTCGCTCAACAAGCTCAAGTCGATCAAACTGAGACGGCACCATCTGAGAAAACGTCGT
CTGGAACTACTGCCGACGCC

Downstream 100 bases:

>100_bases
AGTGATCTGTGATTGATTGACCAACTTCACATGAACAAACGAAGATAAAAAGGTCATAGCCTGTTCCGATTCCACAAAAT
CGGGACAGGCTATATACTGA

Product: Outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 684; Mature: 683

Protein sequence:

>684_residues
MSDVIIVTATKKGYGENLQNVPVAVTAFGEAQLDAKFVQNLQSLSYDVPNVQLEGVGTAPGYANFTIRGLGINSTVPSID
PTVGVFTDGIYLGINAGVVLDNFDLEGIEVLRGPQGLLFGRNVTAGAVVMRTTRPDFNFRASAKASVETGLKKTVSAMVT
GPIAEDVLAAKLAVYYSKDEGWFRNQFDQSSFGKSRDIIIRPALSVKGGDNFRMDLRYEHGDIDGDGAPVQSHAIFPRDT
FGISIDFPGYYNATWNQAIAETNIDVGLGDGVITNIMGYRQFRSRAASDIDGTPQHFFNGYFNINQEQISDELRYSGKIG
AVEVTTGLYYFAQDLAYAEQRDLLGGARIVSGGGTQDQTTWGAFASADWHFSNTLTLNIGGRYSWERKAVRIAPLGANGC
DVNTLRCATNFIDDESWKSFTPKLGLQWQPDNQTQIYGFYTRGFRSGGYNLRNTDPGVPPGPFDQETQDSFEIGAKKQFG
RSRLNIASFYNQMKNLQREINLPGPLGVSQVIRNTADATITGFEAEGQFFIMPNLVLSGQVGYVHGKYRNIQFDISGDGV
INDVDRDLKLPRLSPWTYGAGLTYDQTLGSAGTATARIDFTHRDSARFTDNNAGFLSPADMLDASLTYKTADQIWRFSVY
GRNLLNEVTYGGDTPLPAAFGGPGASLSPLNKGRTIGGEVALSF

Sequences:

>Translated_684_residues
MSDVIIVTATKKGYGENLQNVPVAVTAFGEAQLDAKFVQNLQSLSYDVPNVQLEGVGTAPGYANFTIRGLGINSTVPSID
PTVGVFTDGIYLGINAGVVLDNFDLEGIEVLRGPQGLLFGRNVTAGAVVMRTTRPDFNFRASAKASVETGLKKTVSAMVT
GPIAEDVLAAKLAVYYSKDEGWFRNQFDQSSFGKSRDIIIRPALSVKGGDNFRMDLRYEHGDIDGDGAPVQSHAIFPRDT
FGISIDFPGYYNATWNQAIAETNIDVGLGDGVITNIMGYRQFRSRAASDIDGTPQHFFNGYFNINQEQISDELRYSGKIG
AVEVTTGLYYFAQDLAYAEQRDLLGGARIVSGGGTQDQTTWGAFASADWHFSNTLTLNIGGRYSWERKAVRIAPLGANGC
DVNTLRCATNFIDDESWKSFTPKLGLQWQPDNQTQIYGFYTRGFRSGGYNLRNTDPGVPPGPFDQETQDSFEIGAKKQFG
RSRLNIASFYNQMKNLQREINLPGPLGVSQVIRNTADATITGFEAEGQFFIMPNLVLSGQVGYVHGKYRNIQFDISGDGV
INDVDRDLKLPRLSPWTYGAGLTYDQTLGSAGTATARIDFTHRDSARFTDNNAGFLSPADMLDASLTYKTADQIWRFSVY
GRNLLNEVTYGGDTPLPAAFGGPGASLSPLNKGRTIGGEVALSF
>Mature_683_residues
SDVIIVTATKKGYGENLQNVPVAVTAFGEAQLDAKFVQNLQSLSYDVPNVQLEGVGTAPGYANFTIRGLGINSTVPSIDP
TVGVFTDGIYLGINAGVVLDNFDLEGIEVLRGPQGLLFGRNVTAGAVVMRTTRPDFNFRASAKASVETGLKKTVSAMVTG
PIAEDVLAAKLAVYYSKDEGWFRNQFDQSSFGKSRDIIIRPALSVKGGDNFRMDLRYEHGDIDGDGAPVQSHAIFPRDTF
GISIDFPGYYNATWNQAIAETNIDVGLGDGVITNIMGYRQFRSRAASDIDGTPQHFFNGYFNINQEQISDELRYSGKIGA
VEVTTGLYYFAQDLAYAEQRDLLGGARIVSGGGTQDQTTWGAFASADWHFSNTLTLNIGGRYSWERKAVRIAPLGANGCD
VNTLRCATNFIDDESWKSFTPKLGLQWQPDNQTQIYGFYTRGFRSGGYNLRNTDPGVPPGPFDQETQDSFEIGAKKQFGR
SRLNIASFYNQMKNLQREINLPGPLGVSQVIRNTADATITGFEAEGQFFIMPNLVLSGQVGYVHGKYRNIQFDISGDGVI
NDVDRDLKLPRLSPWTYGAGLTYDQTLGSAGTATARIDFTHRDSARFTDNNAGFLSPADMLDASLTYKTADQIWRFSVYG
RNLLNEVTYGGDTPLPAAFGGPGASLSPLNKGRTIGGEVALSF

Specific function: Receptor for ferric vibriobactin [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug [H]

EC number: NA

Molecular weight: Translated: 74479; Mature: 74348

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVIIVTATKKGYGENLQNVPVAVTAFGEAQLDAKFVQNLQSLSYDVPNVQLEGVGTAP
CCCEEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCC
GYANFTIRGLGINSTVPSIDPTVGVFTDGIYLGINAGVVLDNFDLEGIEVLRGPQGLLFG
CCCEEEEEEECCCCCCCCCCCCCEEEECCEEEEEECCEEEECCCCCCCCEEECCCCEEEC
RNVTAGAVVMRTTRPDFNFRASAKASVETGLKKTVSAMVTGPIAEDVLAAKLAVYYSKDE
CCCCCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEEEECCC
GWFRNQFDQSSFGKSRDIIIRPALSVKGGDNFRMDLRYEHGDIDGDGAPVQSHAIFPRDT
CHHHCCCCHHHCCCCCCEEEEECEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC
FGISIDFPGYYNATWNQAIAETNIDVGLGDGVITNIMGYRQFRSRAASDIDGTPQHFFNG
CEEEEECCCCCCCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
YFNINQEQISDELRYSGKIGAVEVTTGLYYFAQDLAYAEQRDLLGGARIVSGGGTQDQTT
EEECCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
WGAFASADWHFSNTLTLNIGGRYSWERKAVRIAPLGANGCDVNTLRCATNFIDDESWKSF
CCCEECCCEEECCEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEHHHHCCCCCCHHHC
TPKLGLQWQPDNQTQIYGFYTRGFRSGGYNLRNTDPGVPPGPFDQETQDSFEIGAKKQFG
CCCCCCEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHC
RSRLNIASFYNQMKNLQREINLPGPLGVSQVIRNTADATITGFEAEGQFFIMPNLVLSGQ
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEECCCEEEEECCEEEECC
VGYVHGKYRNIQFDISGDGVINDVDRDLKLPRLSPWTYGAGLTYDQTLGSAGTATARIDF
EEEEEEEEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEE
THRDSARFTDNNAGFLSPADMLDASLTYKTADQIWRFSVYGRNLLNEVTYGGDTPLPAAF
EECCCCCEECCCCCCCCHHHHHCCCEEEECHHHHEEEEHHHHHHHHHHCCCCCCCCCCCC
GGPGASLSPLNKGRTIGGEVALSF
CCCCCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure 
SDVIIVTATKKGYGENLQNVPVAVTAFGEAQLDAKFVQNLQSLSYDVPNVQLEGVGTAP
CCEEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCC
GYANFTIRGLGINSTVPSIDPTVGVFTDGIYLGINAGVVLDNFDLEGIEVLRGPQGLLFG
CCCEEEEEEECCCCCCCCCCCCCEEEECCEEEEEECCEEEECCCCCCCCEEECCCCEEEC
RNVTAGAVVMRTTRPDFNFRASAKASVETGLKKTVSAMVTGPIAEDVLAAKLAVYYSKDE
CCCCCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEEEECCC
GWFRNQFDQSSFGKSRDIIIRPALSVKGGDNFRMDLRYEHGDIDGDGAPVQSHAIFPRDT
CHHHCCCCHHHCCCCCCEEEEECEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC
FGISIDFPGYYNATWNQAIAETNIDVGLGDGVITNIMGYRQFRSRAASDIDGTPQHFFNG
CEEEEECCCCCCCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
YFNINQEQISDELRYSGKIGAVEVTTGLYYFAQDLAYAEQRDLLGGARIVSGGGTQDQTT
EEECCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
WGAFASADWHFSNTLTLNIGGRYSWERKAVRIAPLGANGCDVNTLRCATNFIDDESWKSF
CCCEECCCEEECCEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEHHHHCCCCCCHHHC
TPKLGLQWQPDNQTQIYGFYTRGFRSGGYNLRNTDPGVPPGPFDQETQDSFEIGAKKQFG
CCCCCCEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHC
RSRLNIASFYNQMKNLQREINLPGPLGVSQVIRNTADATITGFEAEGQFFIMPNLVLSGQ
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEECCCEEEEECCEEEECC
VGYVHGKYRNIQFDISGDGVINDVDRDLKLPRLSPWTYGAGLTYDQTLGSAGTATARIDF
EEEEEEEEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEE
THRDSARFTDNNAGFLSPADMLDASLTYKTADQIWRFSVYGRNLLNEVTYGGDTPLPAAF
EECCCCCEECCCCCCCCHHHHHCCCEEEECHHHHEEEEHHHHHHHHHHCCCCCCCCCCCC
GGPGASLSPLNKGRTIGGEVALSF
CCCCCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1317381 [H]