| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is bglX [H]
Identifier: 84625556
GI number: 84625556
Start: 4397306
End: 4399477
Strand: Reverse
Name: bglX [H]
Synonym: XOO_3899
Alternate gene names: 84625556
Gene position: 4399477-4397306 (Counterclockwise)
Preceding gene: 84625557
Following gene: 84625554
Centisome position: 89.05
GC content: 65.29
Gene sequence:
>2172_bases ATGGCTGCTGATCGCATCGAAACCCTGATTGCCCGGATGACCGTCGAAGAGAAGGTCGGACAGTTGGGTGTGTTCGCCGA CATGGTGCGGCCGTTCGCGCCGGACGTGAATCCCGAAGCCAACGTGCTCAATGCCGACCAGGTGTTGCAGCAGGTGCGCT TGGGTGGGGTCGGCTCGCTGTTCAATGGCGTTGGCGCCGCACTGGGCGTGCAGATCCAGAAAGTCGCCGTGGAAGAAAGC CGCCTGGGCATCCCGGTGATTCTGGCCGCCGACGTGATCCACGGCATGCGCACGGTGTTCCCGATTCCGCTGGGCGAGGC CGCCAGCTTCGAGCCCGAGCTGGCCGAGCGCACCGCGCGCGCCACCGCGATCGAGGCCACCGCCGCCGGCCTGCACTGGA CTTACGCACCGGCCGTGGACATCGCCCGCGACCAGCGTTGGGGCCGTGGCGCCGAAGGTGCCGGCGAAGACGTGTTGCTG GGCGCCGCCTTTGCCGCTGCGCGGGTGCGCGGGTTCCAGGGCGGCGACCTGACCGCCGACGATTCGCTGTTGGCCACGCC GAAGCATTTCGCCGGCTATGGCGCCGTGGCCGCGGGCATGGAATACAACGCCGTCGATATTGCGCCGCAGACCCTGCGCG ATGTGCATTTGCCGCCGTTCAAGGCTGCATTCGATGCCGGTGCGTTGACCGTGATGTCGTCCTTCAACGACATCAACGGC GTGCCGGCGAGCGCCAATCACGAGTTGCTGACCGAGATCCTGCGCGGCGAATGGCAGTTCCCCGGCGTGGTGATTTCCGA TTACACCGCCGACATGGAATTGATCGCGCACGGCTATGCCGCCGATGAGCGCGACGCGACCAAGAAGGCTTTCCTGGCCG GTCTGGACCTGAGCATGCAAAGCGGCTTTTATGCCGCGCATCTGCCGTCACTGGTGGAAAGCGGCGAGGTGCCGATGGCG ACGTTGGATGCCAGCGTGCGGCGCATCCTGCAGCTGAAAGACGCGATTGGCCTGTTCGATAATCCGTATCGCTCGCTGGA CCCGGCGCGCGAAGCAGACACCACGTATCTGCCGGCGCACGATGCGCTGTCGCGCGATGCGGCGCGGCGTTCGATTGTGT TGTTGAAAAACCAAGGCGGCGTGCTGCCGTTGAAGAAGAGTGGCCAACGCATCGCGTTGATCGGCCCATTCGTGCAGGAC CGCGACAACATCGAGGGCTGCTGGACCTTGTTCGGCGACAAGGAACGCTACGTGACGCTGGAGCAGGGCATGCGTGCGGT GGTCGGCACCGAAGACCTGAGCGTGGTGACAGGTTGTGGCCTGGAAGAGGCGCTGCCGGACGGTATTTCCGCCGCCATCG ATGCCGCGCAGGCGGCCGATGTGGTGGTGCTGGCGTTGGGCGAGCCGCAGCGCTTCAGTGGCGAGGCGCAATCGCGTACC GAGATCAGCTTGCCGCCGGCGCAACAGGAACTGGCCGAAGCGATCGCAGCGACCGGTACCCCGATGGTGGTGCTGCTGCG CAATGGCCGTGCGCTGGCCTTGACGGGTGCGGTGCGCGATGCCGAGGCAATTGCGGTGACCTGGTATCTGGGCACGCAGA CCGGCACAGGCGTGGCCGATGTGTTGTTCGGCGACTACAACCCGTCGGCGCGGTTGCCGATCAGCTTCCCGCAGTCGACC GGGCAGCAGCCGTACTTTTACAACCATCTGCGCACCGGACGCCCGGAATTGCCGACGCTGGCCGAATACAAGGCACGTTG GCGCGAAATGCCAAACGAGCCGCTGTATCCGTTCGGGCATGGTTTGAGCTACACCAGCTTTGCGTATGCGCCGCCGCAGT TGAGCGCGGCGCAGCTCGGTTGGGACGACACGCTGACCATTACCACGCGCGTCACCAACACCGGCAAGGTTGCAGGCGAA GAAGTGGTGCAGTTGTATGTGCATGATCGCGTGGCCAGCCGCGTGCGCCCGGTGCGCGAACTCAAGGGGTTTCGCAAGCT GCTGCTGCAGCCGGGCGAGAGCCAGGACGTGGTGTTTACGTTGACGCGCGATGCGCTGGCATTCACCAATCACAAGGGCG GCTTCGGTGCGGAGCCAGGGCTGTTCGATGTGTGGGTGTGCGCGTCGGCCAAGAGCGGCGAGGCAGCGACGTTCGAGTTG CTGGAACGCTGA
Upstream 100 bases:
>100_bases TACACATCTCCAATCCCGACTCCCGGCCCTCAAAACTTGCATCCCCGCAGGCGCGTCAGGCTAGAATTGACGGCCATGTA AACGTTTTCTCAAGGATCTC
Downstream 100 bases:
>100_bases CAGCGGCGCGTTTCGCCGTGCGGCCGCAATGCAGGCTGCGTTACCAAGGGAGTCGCGTGAATTAAGCCAGCGCCGTTGCT GGCGATCAGTGACTGGTGCT
Product: beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 723; Mature: 722
Protein sequence:
>723_residues MAADRIETLIARMTVEEKVGQLGVFADMVRPFAPDVNPEANVLNADQVLQQVRLGGVGSLFNGVGAALGVQIQKVAVEES RLGIPVILAADVIHGMRTVFPIPLGEAASFEPELAERTARATAIEATAAGLHWTYAPAVDIARDQRWGRGAEGAGEDVLL GAAFAAARVRGFQGGDLTADDSLLATPKHFAGYGAVAAGMEYNAVDIAPQTLRDVHLPPFKAAFDAGALTVMSSFNDING VPASANHELLTEILRGEWQFPGVVISDYTADMELIAHGYAADERDATKKAFLAGLDLSMQSGFYAAHLPSLVESGEVPMA TLDASVRRILQLKDAIGLFDNPYRSLDPAREADTTYLPAHDALSRDAARRSIVLLKNQGGVLPLKKSGQRIALIGPFVQD RDNIEGCWTLFGDKERYVTLEQGMRAVVGTEDLSVVTGCGLEEALPDGISAAIDAAQAADVVVLALGEPQRFSGEAQSRT EISLPPAQQELAEAIAATGTPMVVLLRNGRALALTGAVRDAEAIAVTWYLGTQTGTGVADVLFGDYNPSARLPISFPQST GQQPYFYNHLRTGRPELPTLAEYKARWREMPNEPLYPFGHGLSYTSFAYAPPQLSAAQLGWDDTLTITTRVTNTGKVAGE EVVQLYVHDRVASRVRPVRELKGFRKLLLQPGESQDVVFTLTRDALAFTNHKGGFGAEPGLFDVWVCASAKSGEAATFEL LER
Sequences:
>Translated_723_residues MAADRIETLIARMTVEEKVGQLGVFADMVRPFAPDVNPEANVLNADQVLQQVRLGGVGSLFNGVGAALGVQIQKVAVEES RLGIPVILAADVIHGMRTVFPIPLGEAASFEPELAERTARATAIEATAAGLHWTYAPAVDIARDQRWGRGAEGAGEDVLL GAAFAAARVRGFQGGDLTADDSLLATPKHFAGYGAVAAGMEYNAVDIAPQTLRDVHLPPFKAAFDAGALTVMSSFNDING VPASANHELLTEILRGEWQFPGVVISDYTADMELIAHGYAADERDATKKAFLAGLDLSMQSGFYAAHLPSLVESGEVPMA TLDASVRRILQLKDAIGLFDNPYRSLDPAREADTTYLPAHDALSRDAARRSIVLLKNQGGVLPLKKSGQRIALIGPFVQD RDNIEGCWTLFGDKERYVTLEQGMRAVVGTEDLSVVTGCGLEEALPDGISAAIDAAQAADVVVLALGEPQRFSGEAQSRT EISLPPAQQELAEAIAATGTPMVVLLRNGRALALTGAVRDAEAIAVTWYLGTQTGTGVADVLFGDYNPSARLPISFPQST GQQPYFYNHLRTGRPELPTLAEYKARWREMPNEPLYPFGHGLSYTSFAYAPPQLSAAQLGWDDTLTITTRVTNTGKVAGE EVVQLYVHDRVASRVRPVRELKGFRKLLLQPGESQDVVFTLTRDALAFTNHKGGFGAEPGLFDVWVCASAKSGEAATFEL LER >Mature_722_residues AADRIETLIARMTVEEKVGQLGVFADMVRPFAPDVNPEANVLNADQVLQQVRLGGVGSLFNGVGAALGVQIQKVAVEESR LGIPVILAADVIHGMRTVFPIPLGEAASFEPELAERTARATAIEATAAGLHWTYAPAVDIARDQRWGRGAEGAGEDVLLG AAFAAARVRGFQGGDLTADDSLLATPKHFAGYGAVAAGMEYNAVDIAPQTLRDVHLPPFKAAFDAGALTVMSSFNDINGV PASANHELLTEILRGEWQFPGVVISDYTADMELIAHGYAADERDATKKAFLAGLDLSMQSGFYAAHLPSLVESGEVPMAT LDASVRRILQLKDAIGLFDNPYRSLDPAREADTTYLPAHDALSRDAARRSIVLLKNQGGVLPLKKSGQRIALIGPFVQDR DNIEGCWTLFGDKERYVTLEQGMRAVVGTEDLSVVTGCGLEEALPDGISAAIDAAQAADVVVLALGEPQRFSGEAQSRTE ISLPPAQQELAEAIAATGTPMVVLLRNGRALALTGAVRDAEAIAVTWYLGTQTGTGVADVLFGDYNPSARLPISFPQSTG QQPYFYNHLRTGRPELPTLAEYKARWREMPNEPLYPFGHGLSYTSFAYAPPQLSAAQLGWDDTLTITTRVTNTGKVAGEE VVQLYVHDRVASRVRPVRELKGFRKLLLQPGESQDVVFTLTRDALAFTNHKGGFGAEPGLFDVWVCASAKSGEAATFELL ER
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=744, Percent_Identity=41.8010752688172, Blast_Score=570, Evalue=1e-163,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 77448; Mature: 77317
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADRIETLIARMTVEEKVGQLGVFADMVRPFAPDVNPEANVLNADQVLQQVRLGGVGSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHCCCHHHH FNGVGAALGVQIQKVAVEESRLGIPVILAADVIHGMRTVFPIPLGEAASFEPELAERTAR HHHHHHHHCCEEEEEEHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH ATAIEATAAGLHWTYAPAVDIARDQRWGRGAEGAGEDVLLGAAFAAARVRGFQGGDLTAD HHHEEHHHCCCEEEECCCHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCC DSLLATPKHFAGYGAVAAGMEYNAVDIAPQTLRDVHLPPFKAAFDAGALTVMSSFNDING CCEECCCHHHCCCCHHHCCCCCCEEECCHHHHHHCCCCCHHHHHCCCHHHHHHCCCCCCC VPASANHELLTEILRGEWQFPGVVISDYTADMELIAHGYAADERDATKKAFLAGLDLSMQ CCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHCCCHHHC SGFYAAHLPSLVESGEVPMATLDASVRRILQLKDAIGLFDNPYRSLDPAREADTTYLPAH CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCH DALSRDAARRSIVLLKNQGGVLPLKKSGQRIALIGPFVQDRDNIEGCWTLFGDKERYVTL HHHHHHHHHCEEEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEH EQGMRAVVGTEDLSVVTGCGLEEALPDGISAAIDAAQAADVVVLALGEPQRFSGEAQSRT HHCCEEHCCCCCCCEEECCCHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC EISLPPAQQELAEAIAATGTPMVVLLRNGRALALTGAVRDAEAIAVTWYLGTQTGTGVAD EECCCCHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCEEEEEEEEECCCCCCCEE VLFGDYNPSARLPISFPQSTGQQPYFYNHLRTGRPELPTLAEYKARWREMPNEPLYPFGH EEECCCCCCCCEEEECCCCCCCCCEEHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC GLSYTSFAYAPPQLSAAQLGWDDTLTITTRVTNTGKVAGEEVVQLYVHDRVASRVRPVRE CCCCCCEECCCCCCCHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH LKGFRKLLLQPGESQDVVFTLTRDALAFTNHKGGFGAEPGLFDVWVCASAKSGEAATFEL HHHHHHHHCCCCCCCCEEEEEECCHHEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHH LER HCC >Mature Secondary Structure AADRIETLIARMTVEEKVGQLGVFADMVRPFAPDVNPEANVLNADQVLQQVRLGGVGSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHCCCHHHH FNGVGAALGVQIQKVAVEESRLGIPVILAADVIHGMRTVFPIPLGEAASFEPELAERTAR HHHHHHHHCCEEEEEEHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH ATAIEATAAGLHWTYAPAVDIARDQRWGRGAEGAGEDVLLGAAFAAARVRGFQGGDLTAD HHHEEHHHCCCEEEECCCHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCC DSLLATPKHFAGYGAVAAGMEYNAVDIAPQTLRDVHLPPFKAAFDAGALTVMSSFNDING CCEECCCHHHCCCCHHHCCCCCCEEECCHHHHHHCCCCCHHHHHCCCHHHHHHCCCCCCC VPASANHELLTEILRGEWQFPGVVISDYTADMELIAHGYAADERDATKKAFLAGLDLSMQ CCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHCCCHHHC SGFYAAHLPSLVESGEVPMATLDASVRRILQLKDAIGLFDNPYRSLDPAREADTTYLPAH CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCH DALSRDAARRSIVLLKNQGGVLPLKKSGQRIALIGPFVQDRDNIEGCWTLFGDKERYVTL HHHHHHHHHCEEEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEH EQGMRAVVGTEDLSVVTGCGLEEALPDGISAAIDAAQAADVVVLALGEPQRFSGEAQSRT HHCCEEHCCCCCCCEEECCCHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC EISLPPAQQELAEAIAATGTPMVVLLRNGRALALTGAVRDAEAIAVTWYLGTQTGTGVAD EECCCCHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCEEEEEEEEECCCCCCCEE VLFGDYNPSARLPISFPQSTGQQPYFYNHLRTGRPELPTLAEYKARWREMPNEPLYPFGH EEECCCCCCCCEEEECCCCCCCCCEEHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC GLSYTSFAYAPPQLSAAQLGWDDTLTITTRVTNTGKVAGEEVVQLYVHDRVASRVRPVRE CCCCCCEECCCCCCCHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH LKGFRKLLLQPGESQDVVFTLTRDALAFTNHKGGFGAEPGLFDVWVCASAKSGEAATFEL HHHHHHHHCCCCCCCCEEEEEECCHHEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHH LER HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]