Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84625531

Identifier: 84625531

GI number: 84625531

Start: 4375504

End: 4375701

Strand: Reverse

Name: 84625531

Synonym: XOO_3874

Alternate gene names: NA

Gene position: 4375701-4375504 (Counterclockwise)

Preceding gene: 84625532

Following gene: 84625530

Centisome position: 88.57

GC content: 64.65

Gene sequence:

>198_bases
ATGTCCGATCCGGAACGCTTTGTGGATATCGCCTGCCCGTACTGCGGGGAGTGGATCACGCTGGCGCTGGATCTGACCGG
CGGCGACCAGCACTACATCGAAGATTGCCAGGTCTGCTGCAAGCCGATTTCGGTGCGCGTGCGCTGGGATGAAGAGGGCG
AGGCGCAGGTGAGTGCGCGCGGGCAGGACGACGCCTGA

Upstream 100 bases:

>100_bases
CGCACCAGCAACGCGCCAGTCGTACACTTCATGCGGTCGCACACCGCCGGTGTCTGCCGCAACGCCTGATCACCCGCTTC
GACAGATCCAAGGAACCGCC

Downstream 100 bases:

>100_bases
GCCCCTCCACGGCCACGGCTCCGCCTGCTGTGGCGATGCACGACGGCATTGCCCCCAGAGCGGCCTGAGGTCTGCCATCT
GCATCTCGCCCCGGCTGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MSDPERFVDIACPYCGEWITLALDLTGGDQHYIEDCQVCCKPISVRVRWDEEGEAQVSARGQDDA

Sequences:

>Translated_65_residues
MSDPERFVDIACPYCGEWITLALDLTGGDQHYIEDCQVCCKPISVRVRWDEEGEAQVSARGQDDA
>Mature_64_residues
SDPERFVDIACPYCGEWITLALDLTGGDQHYIEDCQVCCKPISVRVRWDEEGEAQVSARGQDDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7292; Mature: 7161

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
7.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPERFVDIACPYCGEWITLALDLTGGDQHYIEDCQVCCKPISVRVRWDEEGEAQVSAR
CCCCHHEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEECC
GQDDA
CCCCC
>Mature Secondary Structure 
SDPERFVDIACPYCGEWITLALDLTGGDQHYIEDCQVCCKPISVRVRWDEEGEAQVSAR
CCCHHEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEECC
GQDDA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA