Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625529
Identifier: 84625529
GI number: 84625529
Start: 4374349
End: 4374690
Strand: Reverse
Name: 84625529
Synonym: XOO_3872
Alternate gene names: NA
Gene position: 4374690-4374349 (Counterclockwise)
Preceding gene: 84625530
Following gene: 84625528
Centisome position: 88.55
GC content: 64.33
Gene sequence:
>342_bases ATGAAGAATCGCAACTGCACCTCGCTGCTCGCCGCCACTGTCGCCCTTGCTGCGGCTCTGGCGCTGCCGGCGATGGCGCA AAGCACCTCTCAGGATGCCGCGGCGCACTCGGGTAGTTCGGCCACTTCCGCGCAATCCGGCGGCGGCCAGACCTGGGCCA GCGTGGATACCGATAGCGATGGCGCCATCAGCAAGCAGGAAGCGCAGGTCAACGCAGGACTTGCGCAAATTTTCGATCAA GCCGATGGCAATGCCGATGGCAAGCTGACCCCGGATGAGTACAAGGCGTTTGTCGCCAAGGAGCAGGGTGGCGGGGCTGC GAGTGGCTCGCAGGGCAACTGA
Upstream 100 bases:
>100_bases TTTGCGAAAGATTGCATCGGGTTGGACGTTCATTTGCGATGGGTAGGGTGAAGGCATGTGCGGCGACACCGCGCATTCCC AAGCCAAGGAGATCTCCCTA
Downstream 100 bases:
>100_bases GGAGTGAGTTCGGTATATCCCCTTATTCGTGAGAGGAGATATTGGTTCGCACAGCGCTGGCATTGATTCACGCCAACGCT TGGTCACACGCTGAAGTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MKNRNCTSLLAATVALAAALALPAMAQSTSQDAAAHSGSSATSAQSGGGQTWASVDTDSDGAISKQEAQVNAGLAQIFDQ ADGNADGKLTPDEYKAFVAKEQGGGAASGSQGN
Sequences:
>Translated_113_residues MKNRNCTSLLAATVALAAALALPAMAQSTSQDAAAHSGSSATSAQSGGGQTWASVDTDSDGAISKQEAQVNAGLAQIFDQ ADGNADGKLTPDEYKAFVAKEQGGGAASGSQGN >Mature_113_residues MKNRNCTSLLAATVALAAALALPAMAQSTSQDAAAHSGSSATSAQSGGGQTWASVDTDSDGAISKQEAQVNAGLAQIFDQ ADGNADGKLTPDEYKAFVAKEQGGGAASGSQGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11089; Mature: 11089
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRNCTSLLAATVALAAALALPAMAQSTSQDAAAHSGSSATSAQSGGGQTWASVDTDSD CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCC GAISKQEAQVNAGLAQIFDQADGNADGKLTPDEYKAFVAKEQGGGAASGSQGN CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKNRNCTSLLAATVALAAALALPAMAQSTSQDAAAHSGSSATSAQSGGGQTWASVDTDSD CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCC GAISKQEAQVNAGLAQIFDQADGNADGKLTPDEYKAFVAKEQGGGAASGSQGN CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA