Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625494
Identifier: 84625494
GI number: 84625494
Start: 4340883
End: 4341236
Strand: Reverse
Name: 84625494
Synonym: XOO_3837
Alternate gene names: NA
Gene position: 4341236-4340883 (Counterclockwise)
Preceding gene: 84625502
Following gene: 84625489
Centisome position: 87.88
GC content: 70.06
Gene sequence:
>354_bases TTGCCCTGCGACCGCCGCCAATCCGGCTCCGTCCGCCGCTGCATCTGCGCCACGCGCCCTGGTCTTCGGCGGCAGCGGGC AGATCGGCGAGCGTCTGCTGACCCGGGGCTGGCAGGTGACGGCGTAGTCGCGGCACTCGCGCGCAGCGCGCTCCGGTCTG GTCTTGCGGCAAGGCAATCTGGCCGTGCCGGCTACGCAGCGCAACGCTGGGGCCGCCTGCGTGGTCTGAATGCCGCCGCG CTGCAACGCATGCGCGACTATCTGGTCTTCGATCTAGAGCCGGCACGCCGCGATTTCGGCTATGCACCGCGTGCGTTTCG CCCAGTGCCTGAAGAGCTCGGGATCGGCGAGTGA
Upstream 100 bases:
>100_bases CGCGTCAACGCCGCCGCGGCGCGCAGCCCGAAGCGCCGCCGGATTGGCCGCACATCGCCACGCTGCACCCGGTATGCTGC AAGTCTTCATGCACCGATAG
Downstream 100 bases:
>100_bases AGCCTGGCTTGTCGTCGAGCGGCTCTTAGTAACGCCAGCCCAGCTGGCGATACGCCTTGGCCAACACCCAGATCGGCCCG ATCAGCAGATAGGTCAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MPCDRRQSGSVRRCICATRPGLRRQRADRRASADPGLAGDGVVAALARSALRSGLAARQSGRAGYAAQRWGRLRGLNAAA LQRMRDYLVFDLEPARRDFGYAPRAFRPVPEELGIGE
Sequences:
>Translated_117_residues MPCDRRQSGSVRRCICATRPGLRRQRADRRASADPGLAGDGVVAALARSALRSGLAARQSGRAGYAAQRWGRLRGLNAAA LQRMRDYLVFDLEPARRDFGYAPRAFRPVPEELGIGE >Mature_116_residues PCDRRQSGSVRRCICATRPGLRRQRADRRASADPGLAGDGVVAALARSALRSGLAARQSGRAGYAAQRWGRLRGLNAAAL QRMRDYLVFDLEPARRDFGYAPRAFRPVPEELGIGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12810; Mature: 12679
Theoretical pI: Translated: 11.95; Mature: 11.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCDRRQSGSVRRCICATRPGLRRQRADRRASADPGLAGDGVVAALARSALRSGLAARQS CCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC GRAGYAAQRWGRLRGLNAAALQRMRDYLVFDLEPARRDFGYAPRAFRPVPEELGIGE CCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHCCCCC >Mature Secondary Structure PCDRRQSGSVRRCICATRPGLRRQRADRRASADPGLAGDGVVAALARSALRSGLAARQS CCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC GRAGYAAQRWGRLRGLNAAALQRMRDYLVFDLEPARRDFGYAPRAFRPVPEELGIGE CCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA