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The map label for this gene is 84625488

Identifier: 84625488

GI number: 84625488

Start: 4335966

End: 4336322

Strand: Reverse

Name: 84625488

Synonym: XOO_3831

Alternate gene names: NA

Gene position: 4336322-4335966 (Counterclockwise)

Preceding gene: 84625489

Following gene: 84625487

Centisome position: 87.78

GC content: 58.54

Gene sequence:

>357_bases
ATGCGCGAGAAGAACTATCCAAGTGACGTGAGCCGTGAGCGGTTCGAGCAAATCCGCCCGATTCTGGAGCAAGCCCGCAA
GCGCACCAAGCCTGTGACAGTGGATATGTATGAGGTGTGGTGCGCAGTGCTGTATCTGCTACGGACAGGGTGCCCGTGGC
GTGCGTTGCCCAGTGACTTTCCGAAGTGGCGCACGGTGCATTCCTACTTTGCCAAGTGGAGCGAAGTGGACGATGAAGGA
ATGAGCCTGCTGGAGCGGGCGCTTAAAAAATCAGGTTGGCGCGGCCCGCGAGAAACAGGGGCGCAAGGCCTGCAGTACGT
TCTTGATCGTGGACGCGCAGAGCGTGAAGAACAGTGA

Upstream 100 bases:

>100_bases
TCGAGCTTAGCTTGGGACACCGTCCATCCGACCTGCGGTGATAGATGCCCTAATCTAAGAACCTGTTCACAATCTTATTC
AAACCGTGCAAACTCCACGA

Downstream 100 bases:

>100_bases
TACAGCCGGCCAGAAAGGCTATGACGCGGGCAAGAAGGTATCGGGGATCAAGCGCCACATCGCGGTGGATACGCAAGGCT
TTCCACATGCCGTTGCGGTG

Product: ISXo3 transposase orfA

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase And Inactivated Derivatives; Transposase-Like Protein; Isxo3 Transposase Protein; Transposase Fragment

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MREKNYPSDVSRERFEQIRPILEQARKRTKPVTVDMYEVWCAVLYLLRTGCPWRALPSDFPKWRTVHSYFAKWSEVDDEG
MSLLERALKKSGWRGPRETGAQGLQYVLDRGRAEREEQ

Sequences:

>Translated_118_residues
MREKNYPSDVSRERFEQIRPILEQARKRTKPVTVDMYEVWCAVLYLLRTGCPWRALPSDFPKWRTVHSYFAKWSEVDDEG
MSLLERALKKSGWRGPRETGAQGLQYVLDRGRAEREEQ
>Mature_118_residues
MREKNYPSDVSRERFEQIRPILEQARKRTKPVTVDMYEVWCAVLYLLRTGCPWRALPSDFPKWRTVHSYFAKWSEVDDEG
MSLLERALKKSGWRGPRETGAQGLQYVLDRGRAEREEQ

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14021; Mature: 14021

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREKNYPSDVSRERFEQIRPILEQARKRTKPVTVDMYEVWCAVLYLLRTGCPWRALPSDF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PKWRTVHSYFAKWSEVDDEGMSLLERALKKSGWRGPRETGAQGLQYVLDRGRAEREEQ
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MREKNYPSDVSRERFEQIRPILEQARKRTKPVTVDMYEVWCAVLYLLRTGCPWRALPSDF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PKWRTVHSYFAKWSEVDDEGMSLLERALKKSGWRGPRETGAQGLQYVLDRGRAEREEQ
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA