Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is trpE [H]
Identifier: 84625481
GI number: 84625481
Start: 4328487
End: 4329962
Strand: Reverse
Name: trpE [H]
Synonym: XOO_3824
Alternate gene names: 84625481
Gene position: 4329962-4328487 (Counterclockwise)
Preceding gene: 84625482
Following gene: 84625480
Centisome position: 87.65
GC content: 64.43
Gene sequence:
>1476_bases TTGATCACTGCAGAGCAGTTCCAGCGCCAGGCCGCTGAAGGTCATACCCGTATTCCCGTTGTCCGCGAAGTGCTGTCCGA CCTGGACACGCCGCTGTCGGTCTATCTGAAGCTCGCCGACGGCGCTTACACCTATCTGTTCGAATCGGTCGAAGGCGGTG AGCGCTTCGGGCGCTATTCCATCATTGGCCTGCCGGCGCGCCGCGTGTACAGCTTTCGCGGTCACACGCTGGAGGTCAGC GAGCACGGCGAAGTGGTCGACACCCGCGACGTCGCCGACCCGCTAGCCGAAGTGGACGCACTGCGCGCCGAGCATTCGGT GCCGCAACTCGATAGCCTGCCCGGCTTCACCGGCGGGCTTGTCGGCTGGTTCGGTTTCGAGTGCATCCAGTACATCGAAC CTCGCCTGGGCAGCGGCGACAAAGCTGACGAACTTGGCACGCCCGACATTCTGCTGATGCTCTCCGAAGAGCTGGCGGTG TTCGACAACCTCAAGGGCCGCTTGTACCTGATCGTGCATGCCGACCCGCGTCAGCCGCAGGCCTATGTGCGTGCCAATCG GCGTCTGGACGAACTGGCGCACCGCCTGCGTCAGGGCGGCGCCGGCTACCCGCAGGCGCAGATTTCCGATGCGATCGACG AATCGGATTTCCACTCCTCGTTTACCCGCGAGCAGTACCACGCGGTGGTGCGCAAGGCGCAGGAATACGTACGCGCCGGC GACATCTTCCAGGTGGTGCCATCGCAACGGTTACGCGTGCCGTTCCGTGCGCGCCCGGTGGATGTGTATCGCGCCTTGCG TGCGTTGAATCCCTCGCCGTACATGTATTTTCTCGACGTCGGCGGCACCCAGGTGGTCGGCTCGTCACCGGAAATCCTGG CGCGTCTGCGCGATGGCGTGGTCACCGTGCGGCCCATCGCCGGCACCCGCCCGCGTGGCGCAACGCCAGAGCTGGACAAG GCGCTGGAAGAAGAATTGCTGGCCGACCCGAAAGAGCGCGCCGAGCACGTGATGCTGATCGACCTGGGCCGCAACGATGT CGGCCGCGTGGCCGAACCGGGCACGGTCAAGGTGGGCGAGCAGTTCGTGATCGAACGCTATAGCCATGTCATGCATATCG TCAGCGAAGTGACCGGCACGCTGAAAGCGGGTTTGAACTACAGCGATGTATTGCGCGCCACGTTCCCGGCCGGCACCGTC AGCGGCGCGCCGAAAATCCGCGCGCTGGAAATCATTCGTGAGCTGGAACCGGTCAAGCGCAACGTCTACTCCGGTGCGGT CGGCTACATCGGCTGGCACGGCGATGCCGACACCGCCATCGCCATCCGCACCGCTGTGATCCAGGACGGGTATCTGTATG TGCAGGCCGGTGGCGGCGTGGTCTACGACTCCGACCCCGACCTGGAATGGCAGGAAACCATGAACAAGGGGCGCGCGCTG TTTCGCGCAGTTGCCCAGGCGGCAAAGGGCTTGTGA
Upstream 100 bases:
>100_bases CTGACGACTCCACGCTCCTTCTCTTCCGCTCGCCGCTGGTGGCGATGGTGGCCCGTTGCCGTCGTCCGCCCCGCCACAGA GTCCCGGAAGGAAAGTCGTC
Downstream 100 bases:
>100_bases TGGACGGGCAGGGCAGCGCCGCGCGCATCCGCGTTTGCTGCAGGCATTGGCGCAGGCCAGTGCCGAGCAGTGCGCAGGCT ACGGCACTGATCGGCAAACA
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MITAEQFQRQAAEGHTRIPVVREVLSDLDTPLSVYLKLADGAYTYLFESVEGGERFGRYSIIGLPARRVYSFRGHTLEVS EHGEVVDTRDVADPLAEVDALRAEHSVPQLDSLPGFTGGLVGWFGFECIQYIEPRLGSGDKADELGTPDILLMLSEELAV FDNLKGRLYLIVHADPRQPQAYVRANRRLDELAHRLRQGGAGYPQAQISDAIDESDFHSSFTREQYHAVVRKAQEYVRAG DIFQVVPSQRLRVPFRARPVDVYRALRALNPSPYMYFLDVGGTQVVGSSPEILARLRDGVVTVRPIAGTRPRGATPELDK ALEEELLADPKERAEHVMLIDLGRNDVGRVAEPGTVKVGEQFVIERYSHVMHIVSEVTGTLKAGLNYSDVLRATFPAGTV SGAPKIRALEIIRELEPVKRNVYSGAVGYIGWHGDADTAIAIRTAVIQDGYLYVQAGGGVVYDSDPDLEWQETMNKGRAL FRAVAQAAKGL
Sequences:
>Translated_491_residues MITAEQFQRQAAEGHTRIPVVREVLSDLDTPLSVYLKLADGAYTYLFESVEGGERFGRYSIIGLPARRVYSFRGHTLEVS EHGEVVDTRDVADPLAEVDALRAEHSVPQLDSLPGFTGGLVGWFGFECIQYIEPRLGSGDKADELGTPDILLMLSEELAV FDNLKGRLYLIVHADPRQPQAYVRANRRLDELAHRLRQGGAGYPQAQISDAIDESDFHSSFTREQYHAVVRKAQEYVRAG DIFQVVPSQRLRVPFRARPVDVYRALRALNPSPYMYFLDVGGTQVVGSSPEILARLRDGVVTVRPIAGTRPRGATPELDK ALEEELLADPKERAEHVMLIDLGRNDVGRVAEPGTVKVGEQFVIERYSHVMHIVSEVTGTLKAGLNYSDVLRATFPAGTV SGAPKIRALEIIRELEPVKRNVYSGAVGYIGWHGDADTAIAIRTAVIQDGYLYVQAGGGVVYDSDPDLEWQETMNKGRAL FRAVAQAAKGL >Mature_491_residues MITAEQFQRQAAEGHTRIPVVREVLSDLDTPLSVYLKLADGAYTYLFESVEGGERFGRYSIIGLPARRVYSFRGHTLEVS EHGEVVDTRDVADPLAEVDALRAEHSVPQLDSLPGFTGGLVGWFGFECIQYIEPRLGSGDKADELGTPDILLMLSEELAV FDNLKGRLYLIVHADPRQPQAYVRANRRLDELAHRLRQGGAGYPQAQISDAIDESDFHSSFTREQYHAVVRKAQEYVRAG DIFQVVPSQRLRVPFRARPVDVYRALRALNPSPYMYFLDVGGTQVVGSSPEILARLRDGVVTVRPIAGTRPRGATPELDK ALEEELLADPKERAEHVMLIDLGRNDVGRVAEPGTVKVGEQFVIERYSHVMHIVSEVTGTLKAGLNYSDVLRATFPAGTV SGAPKIRALEIIRELEPVKRNVYSGAVGYIGWHGDADTAIAIRTAVIQDGYLYVQAGGGVVYDSDPDLEWQETMNKGRAL FRAVAQAAKGL
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=394, Percent_Identity=38.8324873096447, Blast_Score=248, Evalue=5e-67, Organism=Escherichia coli, GI1788114, Length=474, Percent_Identity=32.7004219409283, Blast_Score=239, Evalue=3e-64, Organism=Escherichia coli, GI87082077, Length=280, Percent_Identity=28.2142857142857, Blast_Score=92, Evalue=9e-20, Organism=Escherichia coli, GI1786809, Length=209, Percent_Identity=27.7511961722488, Blast_Score=82, Evalue=9e-17, Organism=Saccharomyces cerevisiae, GI6320935, Length=499, Percent_Identity=38.0761523046092, Blast_Score=318, Evalue=1e-87, Organism=Saccharomyces cerevisiae, GI6324361, Length=392, Percent_Identity=26.7857142857143, Blast_Score=117, Evalue=4e-27,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 54224; Mature: 54224
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITAEQFQRQAAEGHTRIPVVREVLSDLDTPLSVYLKLADGAYTYLFESVEGGERFGRYS CCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHEEEECCCCCEEHHHHHHCCHHHCCCEE IIGLPARRVYSFRGHTLEVSEHGEVVDTRDVADPLAEVDALRAEHSVPQLDSLPGFTGGL EEECCHHHHHHCCCCEEEECCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH VGWFGFECIQYIEPRLGSGDKADELGTPDILLMLSEELAVFDNLKGRLYLIVHADPRQPQ HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEEEEEECCCCCCH AYVRANRRLDELAHRLRQGGAGYPQAQISDAIDESDFHSSFTREQYHAVVRKAQEYVRAG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC DIFQVVPSQRLRVPFRARPVDVYRALRALNPSPYMYFLDVGGTQVVGSSPEILARLRDGV CHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEECCCHHHHHHHHCCC VTVRPIAGTRPRGATPELDKALEEELLADPKERAEHVMLIDLGRNDVGRVAEPGTVKVGE EEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCCCCCCEEHHH QFVIERYSHVMHIVSEVTGTLKAGLNYSDVLRATFPAGTVSGAPKIRALEIIRELEPVKR HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH NVYSGAVGYIGWHGDADTAIAIRTAVIQDGYLYVQAGGGVVYDSDPDLEWQETMNKGRAL HHHCCCCEEEEECCCCCCCCEEEHEEEECCEEEEEECCEEEECCCCCCCHHHHHHHHHHH FRAVAQAAKGL HHHHHHHHCCC >Mature Secondary Structure MITAEQFQRQAAEGHTRIPVVREVLSDLDTPLSVYLKLADGAYTYLFESVEGGERFGRYS CCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHEEEECCCCCEEHHHHHHCCHHHCCCEE IIGLPARRVYSFRGHTLEVSEHGEVVDTRDVADPLAEVDALRAEHSVPQLDSLPGFTGGL EEECCHHHHHHCCCCEEEECCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH VGWFGFECIQYIEPRLGSGDKADELGTPDILLMLSEELAVFDNLKGRLYLIVHADPRQPQ HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEEEEEECCCCCCH AYVRANRRLDELAHRLRQGGAGYPQAQISDAIDESDFHSSFTREQYHAVVRKAQEYVRAG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC DIFQVVPSQRLRVPFRARPVDVYRALRALNPSPYMYFLDVGGTQVVGSSPEILARLRDGV CHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEECCCHHHHHHHHCCC VTVRPIAGTRPRGATPELDKALEEELLADPKERAEHVMLIDLGRNDVGRVAEPGTVKVGE EEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCCCCCCEEHHH QFVIERYSHVMHIVSEVTGTLKAGLNYSDVLRATFPAGTVSGAPKIRALEIIRELEPVKR HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH NVYSGAVGYIGWHGDADTAIAIRTAVIQDGYLYVQAGGGVVYDSDPDLEWQETMNKGRAL HHHCCCCEEEEECCCCCCCCEEEHEEEECCEEEEEECCEEEECCCCCCCHHHHHHHHHHH FRAVAQAAKGL HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1987141 [H]