Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is opgH [H]

Identifier: 84625439

GI number: 84625439

Start: 4275960

End: 4277897

Strand: Reverse

Name: opgH [H]

Synonym: XOO_3782

Alternate gene names: 84625439

Gene position: 4277897-4275960 (Counterclockwise)

Preceding gene: 84625442

Following gene: 84625438

Centisome position: 86.59

GC content: 66.41

Gene sequence:

>1938_bases
ATGGATGGCACCGTGACTCTTTCCTCGACACCAACTGCGATCCCCCCCGTTTCTGCCCTCGATGCCGGTAAGCCCACGCT
GCCGCCGGAAGCGCCATTGGCAATGCCAGAGCAGAACTTGCGCGAAGGTAGCCTGCAAGTGCGCCACCAGCGCACCTCGC
CTCCCGGCATCGGCATGCGGCGTTTCTATCTGATCGGCGGCACCTTCGCCGCCACTGCCGTGGCCGTGTGGGTGATGCTC
AGCGTGCTGTGGCCCGACGGCATCAGCGTGCTGGAAGGCTGCCTGCTTTGTCTGTTTACCCTGCTGTTCGCCTGGATCGC
GATGTCCTTCGCCAGCGCGGTGGCCGGCTTCGTCACCGTGGTGGCGCGTGCCGGGCGCAAGCTCGGCATCGACCCGGAAG
AGCCACTGCCCACGCTGCGCTCGCGCACCGCGTTGCTGATGCCCACCTATAACGAAGACCCGCGCCGGTTGCTGGCCGGC
CTGCAGGCGATCTACGAATCGGTGGCCGAAACCGGCCAGCTGGAGCACTTCGACTTCTTCGTGCTCAGCGACACCACCCG
CGAGCACATCGGCCGCGCCGAAGAACTGGTGTACAGCGAACTGTGCGACCGAGTCGATGGTCACGGCCGCATTTTCTATC
GCCGCCGCGCCGACAACGCCGCGCGCAAGGCCGGCAACGTGGCCGATTGGGTGCGCCGCTTCGGTGGTCGCTATCCGCAG
ATGCTGATTCTGGACGCCGACAGCGTCATGACCGGCGACACCATCGTGCGGCTGGTCGCCGGCATGGAAAACAACCCCGA
CGTCGGCCTGATCCAGACCCTGCCGGCAGTGGTCAATGGGCAGACCCTGTTCGCCCGCATGCAACAGTTCGGCGGCCGCG
TGTATGGCCCGATCATCGCCTTCGGTGTGGCCTGGTGGCATGGTGCCGAGAGCAACTACTGGGGCCACAACGCCATCATC
CGCACCCACGCCTTCGCCGATCACGCCGGCCTGCCGTCGCTGCGCGGGCGCAAGCCGTTCGGCGGGCATGTGCTCAGCCA
CGACTTCGTGGAAGCCGCGCTGATGCGGCGCGGCGGCTGGGCCATGCACATGGTGCCGTACCTGCAGGGCAGCTACGAAG
AAGGCCCGCCCACGCTCACCGACCTGCTGATCCGCGACCGCCGCTGGTGCCAGGGCAACCTGCAGCACGCCAAGGTGGTG
AGCGCCAAGGGCCTGCACTGGATCAGCCGCATGCACATGCTGATCGGCATCGGGCATTACTTCACCGCACCAATGTGGGG
CCTGCTGATGCTGATCGGCATCGGCATTCCGCTGGCCGGCGTCGGTATCGATCTGGCCGGCGACCTGCCGTTCTCGCCTG
CCCGTTACTGGCACGGCAGCAGCCAGGGCAATGCGATCTGGATCTTCATCTGCACCATGTTCGTGTTGCTGGCGCCCAAG
CTGCTCGGTTACATCGCGCTGCTGCTCAACCCGCGCGAACTGCGCGCCTGCGGCGGTGCCTTCCGCGCTGCGGTGAGCAT
CCTGCTGGAAACCGTGCTGGCGGCATTGATGGCGCCGGTGGTGATGTACCTGCAGTCGCGCGGTGTATTCGAAGTGTTGG
CCGGTAAGGATTCGGGCTGGGATGCGCAAGTCCGCGACGACGGCAAGCTGTCGTGGCCGGCGCTGTTGCGCAGCTACGGT
GGCCTGACTGTGTTCGGTCTGTTCATGGGGGCAGTGGCCTATGCGGTTTCGCCGGCGCTGGCCGCGTGGATGGGGCCGGT
GATCGTCGGCATGGCGTTGTCGATCCCGGTGGTGGCGCTGACCTCGCTGCGTCGCACCGGCATGGCGCTACGCCGCGCCG
GCATTTTTTGCATTCCCGAAGAACTCGATCCGCCCAAGGTGTTGGTGCGCGCGTCTGAGCTACGCCGCGCCGCCGTGCTG
GAACCGTCGCTGATCTGA

Upstream 100 bases:

>100_bases
TCGCCCGCGTCACCGCGTGCCAGGCAACATCGCACTGTATGGCGGGGATGGACCTCCCGTTTCAGCCCGCACTGTCGCCC
TCGCGCGACTGGCAGCCCTG

Downstream 100 bases:

>100_bases
GTTCGCACCGGTGCTGGTCCTTCGGTGCCGGTGACGTTGTGCGGGGGCTGCCAGTTGCAGCTGCAGTTGCATGCACGCAT
CGCAGTCTGCGCCGGCTGAT

Product: glucosyltransferase MdoH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MDGTVTLSSTPTAIPPVSALDAGKPTLPPEAPLAMPEQNLREGSLQVRHQRTSPPGIGMRRFYLIGGTFAATAVAVWVML
SVLWPDGISVLEGCLLCLFTLLFAWIAMSFASAVAGFVTVVARAGRKLGIDPEEPLPTLRSRTALLMPTYNEDPRRLLAG
LQAIYESVAETGQLEHFDFFVLSDTTREHIGRAEELVYSELCDRVDGHGRIFYRRRADNAARKAGNVADWVRRFGGRYPQ
MLILDADSVMTGDTIVRLVAGMENNPDVGLIQTLPAVVNGQTLFARMQQFGGRVYGPIIAFGVAWWHGAESNYWGHNAII
RTHAFADHAGLPSLRGRKPFGGHVLSHDFVEAALMRRGGWAMHMVPYLQGSYEEGPPTLTDLLIRDRRWCQGNLQHAKVV
SAKGLHWISRMHMLIGIGHYFTAPMWGLLMLIGIGIPLAGVGIDLAGDLPFSPARYWHGSSQGNAIWIFICTMFVLLAPK
LLGYIALLLNPRELRACGGAFRAAVSILLETVLAALMAPVVMYLQSRGVFEVLAGKDSGWDAQVRDDGKLSWPALLRSYG
GLTVFGLFMGAVAYAVSPALAAWMGPVIVGMALSIPVVALTSLRRTGMALRRAGIFCIPEELDPPKVLVRASELRRAAVL
EPSLI

Sequences:

>Translated_645_residues
MDGTVTLSSTPTAIPPVSALDAGKPTLPPEAPLAMPEQNLREGSLQVRHQRTSPPGIGMRRFYLIGGTFAATAVAVWVML
SVLWPDGISVLEGCLLCLFTLLFAWIAMSFASAVAGFVTVVARAGRKLGIDPEEPLPTLRSRTALLMPTYNEDPRRLLAG
LQAIYESVAETGQLEHFDFFVLSDTTREHIGRAEELVYSELCDRVDGHGRIFYRRRADNAARKAGNVADWVRRFGGRYPQ
MLILDADSVMTGDTIVRLVAGMENNPDVGLIQTLPAVVNGQTLFARMQQFGGRVYGPIIAFGVAWWHGAESNYWGHNAII
RTHAFADHAGLPSLRGRKPFGGHVLSHDFVEAALMRRGGWAMHMVPYLQGSYEEGPPTLTDLLIRDRRWCQGNLQHAKVV
SAKGLHWISRMHMLIGIGHYFTAPMWGLLMLIGIGIPLAGVGIDLAGDLPFSPARYWHGSSQGNAIWIFICTMFVLLAPK
LLGYIALLLNPRELRACGGAFRAAVSILLETVLAALMAPVVMYLQSRGVFEVLAGKDSGWDAQVRDDGKLSWPALLRSYG
GLTVFGLFMGAVAYAVSPALAAWMGPVIVGMALSIPVVALTSLRRTGMALRRAGIFCIPEELDPPKVLVRASELRRAAVL
EPSLI
>Mature_645_residues
MDGTVTLSSTPTAIPPVSALDAGKPTLPPEAPLAMPEQNLREGSLQVRHQRTSPPGIGMRRFYLIGGTFAATAVAVWVML
SVLWPDGISVLEGCLLCLFTLLFAWIAMSFASAVAGFVTVVARAGRKLGIDPEEPLPTLRSRTALLMPTYNEDPRRLLAG
LQAIYESVAETGQLEHFDFFVLSDTTREHIGRAEELVYSELCDRVDGHGRIFYRRRADNAARKAGNVADWVRRFGGRYPQ
MLILDADSVMTGDTIVRLVAGMENNPDVGLIQTLPAVVNGQTLFARMQQFGGRVYGPIIAFGVAWWHGAESNYWGHNAII
RTHAFADHAGLPSLRGRKPFGGHVLSHDFVEAALMRRGGWAMHMVPYLQGSYEEGPPTLTDLLIRDRRWCQGNLQHAKVV
SAKGLHWISRMHMLIGIGHYFTAPMWGLLMLIGIGIPLAGVGIDLAGDLPFSPARYWHGSSQGNAIWIFICTMFVLLAPK
LLGYIALLLNPRELRACGGAFRAAVSILLETVLAALMAPVVMYLQSRGVFEVLAGKDSGWDAQVRDDGKLSWPALLRSYG
GLTVFGLFMGAVAYAVSPALAAWMGPVIVGMALSIPVVALTSLRRTGMALRRAGIFCIPEELDPPKVLVRASELRRAAVL
EPSLI

Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]

COG id: COG2943

COG function: function code M; Membrane glycosyltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. OpgH subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787287, Length=618, Percent_Identity=38.3495145631068, Blast_Score=385, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 70308; Mature: 70308

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGTVTLSSTPTAIPPVSALDAGKPTLPPEAPLAMPEQNLREGSLQVRHQRTSPPGIGMR
CCCCEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCE
RFYLIGGTFAATAVAVWVMLSVLWPDGISVLEGCLLCLFTLLFAWIAMSFASAVAGFVTV
EEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VARAGRKLGIDPEEPLPTLRSRTALLMPTYNEDPRRLLAGLQAIYESVAETGQLEHFDFF
HHHCCCCCCCCCCCCCCHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE
VLSDTTREHIGRAEELVYSELCDRVDGHGRIFYRRRADNAARKAGNVADWVRRFGGRYPQ
EECCCHHHHHCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCHHHHHHHHCCCCCE
MLILDADSVMTGDTIVRLVAGMENNPDVGLIQTLPAVVNGQTLFARMQQFGGRVYGPIIA
EEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHH
FGVAWWHGAESNYWGHNAIIRTHAFADHAGLPSLRGRKPFGGHVLSHDFVEAALMRRGGW
HHHHHHCCCCCCCCCCCCEEEEECHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
AMHMVPYLQGSYEEGPPTLTDLLIRDRRWCQGNLQHAKVVSAKGLHWISRMHMLIGIGHY
CEEHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH
FTAPMWGLLMLIGIGIPLAGVGIDLAGDLPFSPARYWHGSSQGNAIWIFICTMFVLLAPK
HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHH
LLGYIALLLNPRELRACGGAFRAAVSILLETVLAALMAPVVMYLQSRGVFEVLAGKDSGW
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
DAQVRDDGKLSWPALLRSYGGLTVFGLFMGAVAYAVSPALAAWMGPVIVGMALSIPVVAL
CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSLRRTGMALRRAGIFCIPEELDPPKVLVRASELRRAAVLEPSLI
HHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDGTVTLSSTPTAIPPVSALDAGKPTLPPEAPLAMPEQNLREGSLQVRHQRTSPPGIGMR
CCCCEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCE
RFYLIGGTFAATAVAVWVMLSVLWPDGISVLEGCLLCLFTLLFAWIAMSFASAVAGFVTV
EEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VARAGRKLGIDPEEPLPTLRSRTALLMPTYNEDPRRLLAGLQAIYESVAETGQLEHFDFF
HHHCCCCCCCCCCCCCCHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE
VLSDTTREHIGRAEELVYSELCDRVDGHGRIFYRRRADNAARKAGNVADWVRRFGGRYPQ
EECCCHHHHHCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCHHHHHHHHCCCCCE
MLILDADSVMTGDTIVRLVAGMENNPDVGLIQTLPAVVNGQTLFARMQQFGGRVYGPIIA
EEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHH
FGVAWWHGAESNYWGHNAIIRTHAFADHAGLPSLRGRKPFGGHVLSHDFVEAALMRRGGW
HHHHHHCCCCCCCCCCCCEEEEECHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
AMHMVPYLQGSYEEGPPTLTDLLIRDRRWCQGNLQHAKVVSAKGLHWISRMHMLIGIGHY
CEEHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH
FTAPMWGLLMLIGIGIPLAGVGIDLAGDLPFSPARYWHGSSQGNAIWIFICTMFVLLAPK
HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHH
LLGYIALLLNPRELRACGGAFRAAVSILLETVLAALMAPVVMYLQSRGVFEVLAGKDSGW
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
DAQVRDDGKLSWPALLRSYGGLTVFGLFMGAVAYAVSPALAAWMGPVIVGMALSIPVVAL
CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSLRRTGMALRRAGIFCIPEELDPPKVLVRASELRRAAVLEPSLI
HHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]