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The map label for this gene is yfhC [C]

Identifier: 84625409

GI number: 84625409

Start: 4244483

End: 4244938

Strand: Reverse

Name: yfhC [C]

Synonym: XOO_3752

Alternate gene names: 84625409

Gene position: 4244938-4244483 (Counterclockwise)

Preceding gene: 84625410

Following gene: 84625408

Centisome position: 85.93

GC content: 63.6

Gene sequence:

>456_bases
ATGATCACTACCCCCGACTACCGCGCACTGCTGGACACCGCCATTATCGAAGCCCGCCAGGGCCTGGCCGAAGGCGGCAT
CCCGATTGGCGCGGCGCTGTATCACAACGACGGGCGCCTGCTCGGCTGCGGCCATAACCGCCGCGTGCAGGAAAACGACC
CATCGGTGCATGGCGAGACCGACGCATTCCGCAAGGCGGGCCGCCAGCGCCGCTACAAGGACACCATCATGGTCACCACG
CTGGCGCCGTGCTGGTACTGCAGCGGGCTGGTGCGCCAGTTCAACATCGGCACCGTGGTGGTCGGCGAATCGCTCACCTT
CCAGGGCGGCATTGCGTGGCTGCGCGAGCATGGCGTCAACGTGATCGATCTGCAGAGCCAGGAATGTATCGATCTGCTCG
GCGGCTATATTTCTGCTAACCCGGATGTGTGGAACGAGGATATTGGCGAGGATTGA

Upstream 100 bases:

>100_bases
CGGCGCATGGCTTTGTGCCCGCGTCTGCACCGTCTCTGGAAGACGGCATTCCAAATCTCGACATGCTGCGCCCTGCCGGC
GCGGCTCCTTTGGAGTTCGC

Downstream 100 bases:

>100_bases
GATCAGCGGCGATGCAGGCGCGTACCCGTACGCAGGTGGCGATCGTGGACTTGGGGTATCGCGGGCGGGACGTGGAGGGT
GTGCAGATCCTGCATCGGGG

Product: cytosine deaminase

Products: NA

Alternate protein names: Cytidine/Deoxycytidine Deaminase; Cytosine/Adenosine Deaminase; Deaminase; Cytidine/Deoxycytidylate Deaminase Family Protein; Cytosine/Adenosine Deaminases; CMP/DCMP Deaminase; TRNA-Adenosine Deaminase; Deoxycytidylate Deaminase; TRNA-Adenosine Deaminase Cytosine/Adenosine Deaminases; TRNA-Specific Adenosine Deaminase; Zinc-Dependent Cytosine Deaminase

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MITTPDYRALLDTAIIEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGRQRRYKDTIMVTT
LAPCWYCSGLVRQFNIGTVVVGESLTFQGGIAWLREHGVNVIDLQSQECIDLLGGYISANPDVWNEDIGED

Sequences:

>Translated_151_residues
MITTPDYRALLDTAIIEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGRQRRYKDTIMVTT
LAPCWYCSGLVRQFNIGTVVVGESLTFQGGIAWLREHGVNVIDLQSQECIDLLGGYISANPDVWNEDIGED
>Mature_151_residues
MITTPDYRALLDTAIIEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGRQRRYKDTIMVTT
LAPCWYCSGLVRQFNIGTVVVGESLTFQGGIAWLREHGVNVIDLQSQECIDLLGGYISANPDVWNEDIGED

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693172, Length=136, Percent_Identity=30.8823529411765, Blast_Score=61, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6325319, Length=144, Percent_Identity=39.5833333333333, Blast_Score=104, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16616; Mature: 16616

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTPDYRALLDTAIIEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGET
CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCH
DAFRKAGRQRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESLTFQGGIAWLREHGVN
HHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCCEEEECCCEEECHHHHHHHHCCCC
VIDLQSQECIDLLGGYISANPDVWNEDIGED
EEEECCHHHHHHHCCHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MITTPDYRALLDTAIIEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGET
CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCH
DAFRKAGRQRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESLTFQGGIAWLREHGVN
HHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCCEEEECCCEEECHHHHHHHHCCCC
VIDLQSQECIDLLGGYISANPDVWNEDIGED
EEEECCHHHHHHHCCHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA