Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is gph [C]
Identifier: 84625407
GI number: 84625407
Start: 4243401
End: 4243829
Strand: Reverse
Name: gph [C]
Synonym: XOO_3750
Alternate gene names: 84625407
Gene position: 4243829-4243401 (Counterclockwise)
Preceding gene: 84625408
Following gene: 84625405
Centisome position: 85.9
GC content: 66.67
Gene sequence:
>429_bases ATGCGTGGTTGCTCTAACACGAGCGCGCTTGCGCAGGCCGCGCGTGCTGCGCCAGGTGCAGTAGAGCTGGTGCGTGCGCT GCATGCCGCCGGGTGCCGGCTTGGCATGCTCACCCGCAATGCGCGTGAGCTGGCAACCATCACCTTGCAGGCGATCGGCC TGGACGACGCGTTTGAGTGGAACGACATCGTCGGCCGCGACGAAGCTGCCCCGAAACCTGCGCCTGATGGGCTGCACTAT TTCGAACAGCGCTGGTCGGTGCAGGGCAGCGCGCTGGTGATGGTCGGCGACCACCACAATGACCTCGCCTGCGGCCGCGC TGTCGGTGCGTGCACTGTGCTGGTCAACACGCCTGGCGACCCCTGGCCGGGCTTCGCCGACTGGCGCCTACACGATTGCA CGCAGTTGCTTGCGCAGTGGGAACGCTAA
Upstream 100 bases:
>100_bases CATGACTTCGCCTTGATGCGCCGCGTGCTGGATATCCCGCCGGAGTCAGACATCCTGCATCATCTGGCTGCGCTGCCGGC TGATGAGGCAGCGGCCAAGC
Downstream 100 bases:
>100_bases CGCAAGGCGCAGGCGCTTTTGCTTCGGCTCTCCAGGGCCAGCGTTTCTCAGCGGATCAGGAGGGCAATGTCCCGATGGGA GAAGTGGGGACGCAACGTGT
Product: hypothetical protein
Products: Glycolate; Phosphate [C]
Alternate protein names: HAD Superfamily Hydrolase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Had-Superfamily Hydrolase Protein; Hydrolase; Haloacid Dehalogenase Hydrolase
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MRGCSNTSALAQAARAAPGAVELVRALHAAGCRLGMLTRNARELATITLQAIGLDDAFEWNDIVGRDEAAPKPAPDGLHY FEQRWSVQGSALVMVGDHHNDLACGRAVGACTVLVNTPGDPWPGFADWRLHDCTQLLAQWER
Sequences:
>Translated_142_residues MRGCSNTSALAQAARAAPGAVELVRALHAAGCRLGMLTRNARELATITLQAIGLDDAFEWNDIVGRDEAAPKPAPDGLHY FEQRWSVQGSALVMVGDHHNDLACGRAVGACTVLVNTPGDPWPGFADWRLHDCTQLLAQWER >Mature_142_residues MRGCSNTSALAQAARAAPGAVELVRALHAAGCRLGMLTRNARELATITLQAIGLDDAFEWNDIVGRDEAAPKPAPDGLHY FEQRWSVQGSALVMVGDHHNDLACGRAVGACTVLVNTPGDPWPGFADWRLHDCTQLLAQWER
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.18 [C]
Molecular weight: Translated: 15301; Mature: 15301
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGCSNTSALAQAARAAPGAVELVRALHAAGCRLGMLTRNARELATITLQAIGLDDAFEW CCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEHHHHCCCHHHHEEEEEEECCCCCCCC NDIVGRDEAAPKPAPDGLHYFEQRWSVQGSALVMVGDHHNDLACGRAVGACTVLVNTPGD CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCEEEEEECCCCC PWPGFADWRLHDCTQLLAQWER CCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MRGCSNTSALAQAARAAPGAVELVRALHAAGCRLGMLTRNARELATITLQAIGLDDAFEW CCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEHHHHCCCHHHHEEEEEEECCCCCCCC NDIVGRDEAAPKPAPDGLHYFEQRWSVQGSALVMVGDHHNDLACGRAVGACTVLVNTPGD CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCEEEEEECCCCC PWPGFADWRLHDCTQLLAQWER CCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.57 {phosphoglycolate}} [C]
Substrates: D-Glycerate 2-phosphatelyc; H2O [C]
Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]
General reaction: Additional information:
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA