Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is gph [C]

Identifier: 84625407

GI number: 84625407

Start: 4243401

End: 4243829

Strand: Reverse

Name: gph [C]

Synonym: XOO_3750

Alternate gene names: 84625407

Gene position: 4243829-4243401 (Counterclockwise)

Preceding gene: 84625408

Following gene: 84625405

Centisome position: 85.9

GC content: 66.67

Gene sequence:

>429_bases
ATGCGTGGTTGCTCTAACACGAGCGCGCTTGCGCAGGCCGCGCGTGCTGCGCCAGGTGCAGTAGAGCTGGTGCGTGCGCT
GCATGCCGCCGGGTGCCGGCTTGGCATGCTCACCCGCAATGCGCGTGAGCTGGCAACCATCACCTTGCAGGCGATCGGCC
TGGACGACGCGTTTGAGTGGAACGACATCGTCGGCCGCGACGAAGCTGCCCCGAAACCTGCGCCTGATGGGCTGCACTAT
TTCGAACAGCGCTGGTCGGTGCAGGGCAGCGCGCTGGTGATGGTCGGCGACCACCACAATGACCTCGCCTGCGGCCGCGC
TGTCGGTGCGTGCACTGTGCTGGTCAACACGCCTGGCGACCCCTGGCCGGGCTTCGCCGACTGGCGCCTACACGATTGCA
CGCAGTTGCTTGCGCAGTGGGAACGCTAA

Upstream 100 bases:

>100_bases
CATGACTTCGCCTTGATGCGCCGCGTGCTGGATATCCCGCCGGAGTCAGACATCCTGCATCATCTGGCTGCGCTGCCGGC
TGATGAGGCAGCGGCCAAGC

Downstream 100 bases:

>100_bases
CGCAAGGCGCAGGCGCTTTTGCTTCGGCTCTCCAGGGCCAGCGTTTCTCAGCGGATCAGGAGGGCAATGTCCCGATGGGA
GAAGTGGGGACGCAACGTGT

Product: hypothetical protein

Products: Glycolate; Phosphate [C]

Alternate protein names: HAD Superfamily Hydrolase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Had-Superfamily Hydrolase Protein; Hydrolase; Haloacid Dehalogenase Hydrolase

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MRGCSNTSALAQAARAAPGAVELVRALHAAGCRLGMLTRNARELATITLQAIGLDDAFEWNDIVGRDEAAPKPAPDGLHY
FEQRWSVQGSALVMVGDHHNDLACGRAVGACTVLVNTPGDPWPGFADWRLHDCTQLLAQWER

Sequences:

>Translated_142_residues
MRGCSNTSALAQAARAAPGAVELVRALHAAGCRLGMLTRNARELATITLQAIGLDDAFEWNDIVGRDEAAPKPAPDGLHY
FEQRWSVQGSALVMVGDHHNDLACGRAVGACTVLVNTPGDPWPGFADWRLHDCTQLLAQWER
>Mature_142_residues
MRGCSNTSALAQAARAAPGAVELVRALHAAGCRLGMLTRNARELATITLQAIGLDDAFEWNDIVGRDEAAPKPAPDGLHY
FEQRWSVQGSALVMVGDHHNDLACGRAVGACTVLVNTPGDPWPGFADWRLHDCTQLLAQWER

Specific function: Unknown

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.3.18 [C]

Molecular weight: Translated: 15301; Mature: 15301

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGCSNTSALAQAARAAPGAVELVRALHAAGCRLGMLTRNARELATITLQAIGLDDAFEW
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEHHHHCCCHHHHEEEEEEECCCCCCCC
NDIVGRDEAAPKPAPDGLHYFEQRWSVQGSALVMVGDHHNDLACGRAVGACTVLVNTPGD
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCEEEEEECCCCC
PWPGFADWRLHDCTQLLAQWER
CCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MRGCSNTSALAQAARAAPGAVELVRALHAAGCRLGMLTRNARELATITLQAIGLDDAFEW
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEHHHHCCCHHHHEEEEEEECCCCCCCC
NDIVGRDEAAPKPAPDGLHYFEQRWSVQGSALVMVGDHHNDLACGRAVGACTVLVNTPGD
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCEEEEEECCCCC
PWPGFADWRLHDCTQLLAQWER
CCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mg2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 0.57 {phosphoglycolate}} [C]

Substrates: D-Glycerate 2-phosphatelyc; H2O [C]

Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]

General reaction: Additional information:

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA