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The map label for this gene is cirA [C]

Identifier: 84625361

GI number: 84625361

Start: 4186355

End: 4189045

Strand: Reverse

Name: cirA [C]

Synonym: XOO_3704

Alternate gene names: 84625361

Gene position: 4189045-4186355 (Counterclockwise)

Preceding gene: 84625362

Following gene: 84625360

Centisome position: 84.79

GC content: 61.13

Gene sequence:

>2691_bases
ATGTCGCCTCTCCCGCGTGACTCGCTGCGTTGTGATTCGCCCTCTGCGCTGTCCCTGCTTGCCTGCGGCGCCAATGCGCA
GACACAGGACGCATCGTCGGCAGCATCGGCGCAGATCTCCCAGCTCGACACCATCAAGGTCACCAGCTCGTACCAGAAGA
GCCTGATCACCGCGATGGACAACAAGCGCGACGACGTGTGCATGACCGACGGCATCTCTGCGCAGGACATCGGCAAGTTT
CCTGCCGAGAACATCGCCGAGGCGATCCAGCGCATTCCCGGCGTACAGATCTCCACCATCAACGGGCGCGGTTCCACGAT
CAGCGTGCGCGGCCTGGGCCCGCAGTATTCGGCCACCACCATCAACGGCCAGGTGATCAAGAGCGCCGATTTCACCGATG
GCTTCCGCTACGACATCATCCAGCCAGAGGTGGCCGCCGGAATCGAGGTGATCAAATCGCCGTCGGCGGACATGGATGCC
GGTGGCCTGTCGGGCACGGTCAACATCAACACCACCAAACCCCTGGACTACCAGCAGACCAAGCTGTTGTTTTCGGCCAA
GACGCAGCCCTCCGAATTTGCCGGCAGTTCGCCCACGCCCAAGGGGGTGCTGACCTATATCGACCAGTTCCAGTTCGGTG
GCGGCGATCTTGGCGTGTTTCTCGGTGCCGGCTATCAGAAGCTCAAGGATCGCGCCGATTATCTGTGGATCGACCGTTGG
TATACGCAGGCCACCGACGCCGGCACGTTGTATATCCCGCGCCGTCCGCGCTATCGCTCGATCGAGCGCGAGACCACGCG
CAAGATGTTCAATGGCGGGGTGCAATGGAAGCCTGGCGAGCAGCTGGACATGAACCTTACTGCGCTGTATTCGCAGGACA
GAACCGCCAACGACATGAACCAGCTGGTGTACTCGTTCGAGCGCAGTCCGCTGACAGTGCTGCAGACCAACGGGCTGACC
GCCACACAGGTATCGGCGTCGGATTACTGGCTGGAAAACAATCACCAGATCGAACAGCACAATCTGTCCACCCAGCTGCT
CACCTACGACTTCAAGTGGAAGGGCGATGCCTGGACGCTGCGTGGCGCGGCCAATGACACCCAGGGCAAGACCGACGAGA
ACGAGCGTGCCGCGATCCTGGGCCGGATTCCCTCGGCAACGCTGCTGGATACCTTCAATCCCGATGCGGTCTCGCTGACC
ACCGATGCCGACGCCAACGACGCCAGTGCCTGGAACACGGCCAATCTGGTGCGTAGCGAATATCCCAACGGCTCCATCCA
ATCGCTCAGCAACAAGGAATGGTCGCTGCAGCTGGATGCCGAACGGTATCTGGATCTGGGCGCGTTGAACGCGGTGCGCT
TCGGTGCCAAATACCGTCGGGAAACCTTTGATCGCGACGTGCGCCGGCGCGATTTTCTGTATCTGCTCAGAACCGGTGCG
GTGTCCGGCTTCGACATGTTCCCGGAACTGTCTGCCGCCAGCAGCACGGTCAGCAATTTCCTCGACGGACAACTGGCCTC
TCAGGATAGCTGGGTCACCCCGGATGTCGCGGCTTATGCGCGCTCGCTGGCGGCGGCGGGCATCACCGTGCAGGTGCTGT
TCGCACCGCAGAGCAGCTACAGCATCGAGAACGATATTTCTTCTGCGTATGCGATGGCGCGCATCGACACCGACATCGGC
AGCATGCGTTTGCGCGGCAACGTCGGCATGCGCTATGAAAATACCAGGCGCACCACCGACACCTACCTGACGCAGGCGCA
AGCTGCCAGCGCCGACGCCAATCTCGTGGTCGGCACCGCGCGCGCACCGTACGCGTATTCCAACTGGTTGCCCAGACTGA
ATCTGGTGCTGGACATGCGTGAAGACTTGCTGCTGCGCTTTGCGGCCGCCAAGGTCCTGGTGCGGCCGATTCTGGACAGC
AACACCGCCATCGCCTCAACGGTTTCCACCGGCACCAATACCGCCGGCACTACCACCTATGGGGTGGCCCAGGGCCAGAC
CGATCTGAAGGCGCTGACCGCCGATCAGGCCGACCTGAGCCTGGAGTGGTATTACGGCAACGGCGGCGCGTTGACCGTGG
CCGGGTTCTGGAAAAACATCAAGAACGGCACCTTCAACAGCATCGTCTGCCCGGCCGCCTTCAACGGCACCGCGCTATCC
AGCAATGCAGCCGGCGACTGTGTGAGCGGTAACGGCGATATTTACGAGATCACCGCCACCACCAACGATCCGAGCAAGGT
CAAGATTCGTGGTTACGAGCTCGGCTGGACGCAATCGCTGGATGCCTGGTTGCCGATCGATGGCTTCGGGTTCACCACCA
ATTTCACCCGGGTGATTCCGCAGCGCGATACCGATTTCAAGATCCGCAACCTGTCCGAACAGACCTGGAACGCCACCGCG
TATTGGGAAAGCGAGCATGACTCGGCACGCGTGTCGCTCAATCATCGCAGCGAGTACGAGCAGGACAGCAGCGACAGCTT
CTTCGCACGCGAAGGCCACATCATGAAGGCGCGTACGCAGCTGGATGCGGTACTCGGCTACCAGGTCAACGACAAGCTGA
GTGTCCAGTTGGGCGGCTTGAACCTCACCAACCGAAAAGAACAAGCGTACAAGGACATCCCCAGCCGCTGGCAGATGACC
GGCGTCACCGGTCGCAGCTATTACCTGTCGATGCAATGGGACATGCTTTGA

Upstream 100 bases:

>100_bases
GTGCGCGTGTGGTTGGGTTGCCAGCGCCAGGATCTGTCATCGCTGATCGATCGCAATGCCAGTCGCGTCGTCGTCCAGCC
ATTCCACTCCAGGATCTCTC

Downstream 100 bases:

>100_bases
TGCTGAAGCAGCGCGCTTCGGGCCGCCGTGCACAACTGCGTACGGCAGCCAGCAGTCAGGACAACGATGCCGGTGCATTG
GAAGCGTGCCGTGCAGGGGT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: Nb-Dependent Receptor; NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Subfamily; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Subfamily Protein; Outer Membrane Protein; Outer Membrane Insertion C-Terminal Signal; NB Dependent Receptor-Related Protein; NB-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Protein; Nucleoside Diphosphate Kinase; Crossover Junction Endodeoxyribonuclease RuvC; NB-Dependent Maltose Outer Membrane Transporter MalA; NB-Dependent Receptor-Like Protein; NB Dependent Receptor For Iron Chelates; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; 3-Dehydroquinate Synthase; NB Dependent Receptor Protein; 1-(5-Phosphoribosyl)-5-; Rhodanese-Like Protein; Argininosuccinate Synthase

Number of amino acids: Translated: 896; Mature: 895

Protein sequence:

>896_residues
MSPLPRDSLRCDSPSALSLLACGANAQTQDASSAASAQISQLDTIKVTSSYQKSLITAMDNKRDDVCMTDGISAQDIGKF
PAENIAEAIQRIPGVQISTINGRGSTISVRGLGPQYSATTINGQVIKSADFTDGFRYDIIQPEVAAGIEVIKSPSADMDA
GGLSGTVNINTTKPLDYQQTKLLFSAKTQPSEFAGSSPTPKGVLTYIDQFQFGGGDLGVFLGAGYQKLKDRADYLWIDRW
YTQATDAGTLYIPRRPRYRSIERETTRKMFNGGVQWKPGEQLDMNLTALYSQDRTANDMNQLVYSFERSPLTVLQTNGLT
ATQVSASDYWLENNHQIEQHNLSTQLLTYDFKWKGDAWTLRGAANDTQGKTDENERAAILGRIPSATLLDTFNPDAVSLT
TDADANDASAWNTANLVRSEYPNGSIQSLSNKEWSLQLDAERYLDLGALNAVRFGAKYRRETFDRDVRRRDFLYLLRTGA
VSGFDMFPELSAASSTVSNFLDGQLASQDSWVTPDVAAYARSLAAAGITVQVLFAPQSSYSIENDISSAYAMARIDTDIG
SMRLRGNVGMRYENTRRTTDTYLTQAQAASADANLVVGTARAPYAYSNWLPRLNLVLDMREDLLLRFAAAKVLVRPILDS
NTAIASTVSTGTNTAGTTTYGVAQGQTDLKALTADQADLSLEWYYGNGGALTVAGFWKNIKNGTFNSIVCPAAFNGTALS
SNAAGDCVSGNGDIYEITATTNDPSKVKIRGYELGWTQSLDAWLPIDGFGFTTNFTRVIPQRDTDFKIRNLSEQTWNATA
YWESEHDSARVSLNHRSEYEQDSSDSFFAREGHIMKARTQLDAVLGYQVNDKLSVQLGGLNLTNRKEQAYKDIPSRWQMT
GVTGRSYYLSMQWDML

Sequences:

>Translated_896_residues
MSPLPRDSLRCDSPSALSLLACGANAQTQDASSAASAQISQLDTIKVTSSYQKSLITAMDNKRDDVCMTDGISAQDIGKF
PAENIAEAIQRIPGVQISTINGRGSTISVRGLGPQYSATTINGQVIKSADFTDGFRYDIIQPEVAAGIEVIKSPSADMDA
GGLSGTVNINTTKPLDYQQTKLLFSAKTQPSEFAGSSPTPKGVLTYIDQFQFGGGDLGVFLGAGYQKLKDRADYLWIDRW
YTQATDAGTLYIPRRPRYRSIERETTRKMFNGGVQWKPGEQLDMNLTALYSQDRTANDMNQLVYSFERSPLTVLQTNGLT
ATQVSASDYWLENNHQIEQHNLSTQLLTYDFKWKGDAWTLRGAANDTQGKTDENERAAILGRIPSATLLDTFNPDAVSLT
TDADANDASAWNTANLVRSEYPNGSIQSLSNKEWSLQLDAERYLDLGALNAVRFGAKYRRETFDRDVRRRDFLYLLRTGA
VSGFDMFPELSAASSTVSNFLDGQLASQDSWVTPDVAAYARSLAAAGITVQVLFAPQSSYSIENDISSAYAMARIDTDIG
SMRLRGNVGMRYENTRRTTDTYLTQAQAASADANLVVGTARAPYAYSNWLPRLNLVLDMREDLLLRFAAAKVLVRPILDS
NTAIASTVSTGTNTAGTTTYGVAQGQTDLKALTADQADLSLEWYYGNGGALTVAGFWKNIKNGTFNSIVCPAAFNGTALS
SNAAGDCVSGNGDIYEITATTNDPSKVKIRGYELGWTQSLDAWLPIDGFGFTTNFTRVIPQRDTDFKIRNLSEQTWNATA
YWESEHDSARVSLNHRSEYEQDSSDSFFAREGHIMKARTQLDAVLGYQVNDKLSVQLGGLNLTNRKEQAYKDIPSRWQMT
GVTGRSYYLSMQWDML
>Mature_895_residues
SPLPRDSLRCDSPSALSLLACGANAQTQDASSAASAQISQLDTIKVTSSYQKSLITAMDNKRDDVCMTDGISAQDIGKFP
AENIAEAIQRIPGVQISTINGRGSTISVRGLGPQYSATTINGQVIKSADFTDGFRYDIIQPEVAAGIEVIKSPSADMDAG
GLSGTVNINTTKPLDYQQTKLLFSAKTQPSEFAGSSPTPKGVLTYIDQFQFGGGDLGVFLGAGYQKLKDRADYLWIDRWY
TQATDAGTLYIPRRPRYRSIERETTRKMFNGGVQWKPGEQLDMNLTALYSQDRTANDMNQLVYSFERSPLTVLQTNGLTA
TQVSASDYWLENNHQIEQHNLSTQLLTYDFKWKGDAWTLRGAANDTQGKTDENERAAILGRIPSATLLDTFNPDAVSLTT
DADANDASAWNTANLVRSEYPNGSIQSLSNKEWSLQLDAERYLDLGALNAVRFGAKYRRETFDRDVRRRDFLYLLRTGAV
SGFDMFPELSAASSTVSNFLDGQLASQDSWVTPDVAAYARSLAAAGITVQVLFAPQSSYSIENDISSAYAMARIDTDIGS
MRLRGNVGMRYENTRRTTDTYLTQAQAASADANLVVGTARAPYAYSNWLPRLNLVLDMREDLLLRFAAAKVLVRPILDSN
TAIASTVSTGTNTAGTTTYGVAQGQTDLKALTADQADLSLEWYYGNGGALTVAGFWKNIKNGTFNSIVCPAAFNGTALSS
NAAGDCVSGNGDIYEITATTNDPSKVKIRGYELGWTQSLDAWLPIDGFGFTTNFTRVIPQRDTDFKIRNLSEQTWNATAY
WESEHDSARVSLNHRSEYEQDSSDSFFAREGHIMKARTQLDAVLGYQVNDKLSVQLGGLNLTNRKEQAYKDIPSRWQMTG
VTGRSYYLSMQWDML

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 98412; Mature: 98281

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPLPRDSLRCDSPSALSLLACGANAQTQDASSAASAQISQLDTIKVTSSYQKSLITAMD
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCEEEEECCHHHHHHHHHHC
NKRDDVCMTDGISAQDIGKFPAENIAEAIQRIPGVQISTINGRGSTISVRGLGPQYSATT
CCCCCEEEECCCCHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCEEE
INGQVIKSADFTDGFRYDIIQPEVAAGIEVIKSPSADMDAGGLSGTVNINTTKPLDYQQT
ECCEEEECCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHH
KLLFSAKTQPSEFAGSSPTPKGVLTYIDQFQFGGGDLGVFLGAGYQKLKDRADYLWIDRW
EEEEEECCCCHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCEEEEEEH
YTQATDAGTLYIPRRPRYRSIERETTRKMFNGGVQWKPGEQLDMNLTALYSQDRTANDMN
CCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHH
QLVYSFERSPLTVLQTNGLTATQVSASDYWLENNHQIEQHNLSTQLLTYDFKWKGDAWTL
HHHHHHCCCCEEEEEECCCEEEEECCCCEEECCCCEEHHCCCCEEEEEEEEEECCCEEEE
RGAANDTQGKTDENERAAILGRIPSATLLDTFNPDAVSLTTDADANDASAWNTANLVRSE
ECCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHC
YPNGSIQSLSNKEWSLQLDAERYLDLGALNAVRFGAKYRRETFDRDVRRRDFLYLLRTGA
CCCCCHHHCCCCCEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
VSGFDMFPELSAASSTVSNFLDGQLASQDSWVTPDVAAYARSLAAAGITVQVLFAPQSSY
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCC
SIENDISSAYAMARIDTDIGSMRLRGNVGMRYENTRRTTDTYLTQAQAASADANLVVGTA
CCHHHHHHHEEEEEECCCCCCEEEECCCCCEECCCCCCHHHHHHHHHHCCCCCEEEEECC
RAPYAYSNWLPRLNLVLDMREDLLLRFAAAKVLVRPILDSNTAIASTVSTGTNTAGTTTY
CCCCHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEE
GVAQGQTDLKALTADQADLSLEWYYGNGGALTVAGFWKNIKNGTFNSIVCPAAFNGTALS
EECCCCCHHHHEECCCCCEEEEEEECCCCEEEEEEHHHHCCCCCCCEEECCCCCCCCEEC
SNAAGDCVSGNGDIYEITATTNDPSKVKIRGYELGWTQSLDAWLPIDGFGFTTNFTRVIP
CCCCCCEECCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEECCCCCCCCCCEEEECC
QRDTDFKIRNLSEQTWNATAYWESEHDSARVSLNHRSEYEQDSSDSFFAREGHIMKARTQ
CCCCCEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEECCCCEEEHHHH
LDAVLGYQVNDKLSVQLGGLNLTNRKEQAYKDIPSRWQMTGVTGRSYYLSMQWDML
HHHHCCEEECCEEEEEECCCCCCCCHHHHHHCCCCCEEEEECCCCEEEEEEEEECC
>Mature Secondary Structure 
SPLPRDSLRCDSPSALSLLACGANAQTQDASSAASAQISQLDTIKVTSSYQKSLITAMD
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCEEEEECCHHHHHHHHHHC
NKRDDVCMTDGISAQDIGKFPAENIAEAIQRIPGVQISTINGRGSTISVRGLGPQYSATT
CCCCCEEEECCCCHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCEEE
INGQVIKSADFTDGFRYDIIQPEVAAGIEVIKSPSADMDAGGLSGTVNINTTKPLDYQQT
ECCEEEECCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHH
KLLFSAKTQPSEFAGSSPTPKGVLTYIDQFQFGGGDLGVFLGAGYQKLKDRADYLWIDRW
EEEEEECCCCHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCEEEEEEH
YTQATDAGTLYIPRRPRYRSIERETTRKMFNGGVQWKPGEQLDMNLTALYSQDRTANDMN
CCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHH
QLVYSFERSPLTVLQTNGLTATQVSASDYWLENNHQIEQHNLSTQLLTYDFKWKGDAWTL
HHHHHHCCCCEEEEEECCCEEEEECCCCEEECCCCEEHHCCCCEEEEEEEEEECCCEEEE
RGAANDTQGKTDENERAAILGRIPSATLLDTFNPDAVSLTTDADANDASAWNTANLVRSE
ECCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHC
YPNGSIQSLSNKEWSLQLDAERYLDLGALNAVRFGAKYRRETFDRDVRRRDFLYLLRTGA
CCCCCHHHCCCCCEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
VSGFDMFPELSAASSTVSNFLDGQLASQDSWVTPDVAAYARSLAAAGITVQVLFAPQSSY
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCC
SIENDISSAYAMARIDTDIGSMRLRGNVGMRYENTRRTTDTYLTQAQAASADANLVVGTA
CCHHHHHHHEEEEEECCCCCCEEEECCCCCEECCCCCCHHHHHHHHHHCCCCCEEEEECC
RAPYAYSNWLPRLNLVLDMREDLLLRFAAAKVLVRPILDSNTAIASTVSTGTNTAGTTTY
CCCCHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEE
GVAQGQTDLKALTADQADLSLEWYYGNGGALTVAGFWKNIKNGTFNSIVCPAAFNGTALS
EECCCCCHHHHEECCCCCEEEEEEECCCCEEEEEEHHHHCCCCCCCEEECCCCCCCCEEC
SNAAGDCVSGNGDIYEITATTNDPSKVKIRGYELGWTQSLDAWLPIDGFGFTTNFTRVIP
CCCCCCEECCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEECCCCCCCCCCEEEECC
QRDTDFKIRNLSEQTWNATAYWESEHDSARVSLNHRSEYEQDSSDSFFAREGHIMKARTQ
CCCCCEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEECCCCEEEHHHH
LDAVLGYQVNDKLSVQLGGLNLTNRKEQAYKDIPSRWQMTGVTGRSYYLSMQWDML
HHHHCCEEECCEEEEEECCCCCCCCHHHHHHCCCCCEEEEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA