Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625298
Identifier: 84625298
GI number: 84625298
Start: 4118748
End: 4119281
Strand: Reverse
Name: 84625298
Synonym: XOO_3641
Alternate gene names: NA
Gene position: 4119281-4118748 (Counterclockwise)
Preceding gene: 84625301
Following gene: 84625297
Centisome position: 83.38
GC content: 64.98
Gene sequence:
>534_bases ATGCATCGCAAACGCATCGTTACCGTTGTGCTTTCCTCCATCCTGGCGCTGGATGCCTTCGCACCGGCTGCATTCGCCGG GGATTGGGATCGCGACCACGATCGCCGCGGCCATGACCGCGGCTATGGCCCGGATCATCGCCGTGACTGGCGCGACGATC GCCGTGACGACCGCCGTGACGACCGCCGTGACGACCGCCGTGACGACCGCCGCGAGTGGCGTCAGGACCGCCGTTACTAC AGCAACGGCTACCGTGATGGTTATCGCGACGCCCGTTACCAGGACCGTCGTTACGACCGCAATCGGGTCTATGTCTATGA CCTCCCTGGGTACTACCGCCCCGGCCCGCCGCCGCGTCCGTATTGGGCCCGTGGCCAGCGTTATCACGGGCCGGTCTATG TGGTGAACGACTACGACCGCTATGACCTGCGTCGCCCACCATACGGCTACCGCTGGCAGCGCGACGACCGCGGCAACCTG CTGTTGGTCGCCATCGCCACCGGCATCATTGCCGACCTGGTGATCAACAATTGA
Upstream 100 bases:
>100_bases GTCCGGCCTGAATAGGCTTTTTCGTAATCGATTCCGGCAAGAATGCATTAAGGCGTCCAGCCTCATTAATGAAATTACGA CACCGTGAACAGGAACTGTC
Downstream 100 bases:
>100_bases GCGTGGCGATCAACCTGCGCGGCCAGGTGCGGCCAGCGGATCGGTGACGGCAACAGGGCGTGCTTCGGCGCGCCCTGTCG TATTGTGGTAGCCCCGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MHRKRIVTVVLSSILALDAFAPAAFAGDWDRDHDRRGHDRGYGPDHRRDWRDDRRDDRRDDRRDDRRDDRREWRQDRRYY SNGYRDGYRDARYQDRRYDRNRVYVYDLPGYYRPGPPPRPYWARGQRYHGPVYVVNDYDRYDLRRPPYGYRWQRDDRGNL LLVAIATGIIADLVINN
Sequences:
>Translated_177_residues MHRKRIVTVVLSSILALDAFAPAAFAGDWDRDHDRRGHDRGYGPDHRRDWRDDRRDDRRDDRRDDRRDDRREWRQDRRYY SNGYRDGYRDARYQDRRYDRNRVYVYDLPGYYRPGPPPRPYWARGQRYHGPVYVVNDYDRYDLRRPPYGYRWQRDDRGNL LLVAIATGIIADLVINN >Mature_177_residues MHRKRIVTVVLSSILALDAFAPAAFAGDWDRDHDRRGHDRGYGPDHRRDWRDDRRDDRRDDRRDDRRDDRREWRQDRRYY SNGYRDGYRDARYQDRRYDRNRVYVYDLPGYYRPGPPPRPYWARGQRYHGPVYVVNDYDRYDLRRPPYGYRWQRDDRGNL LLVAIATGIIADLVINN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21740; Mature: 21740
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRKRIVTVVLSSILALDAFAPAAFAGDWDRDHDRRGHDRGYGPDHRRDWRDDRRDDRRD CCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH DRRDDRRDDRREWRQDRRYYSNGYRDGYRDARYQDRRYDRNRVYVYDLPGYYRPGPPPRP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCC YWARGQRYHGPVYVVNDYDRYDLRRPPYGYRWQRDDRGNLLLVAIATGIIADLVINN CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCC >Mature Secondary Structure MHRKRIVTVVLSSILALDAFAPAAFAGDWDRDHDRRGHDRGYGPDHRRDWRDDRRDDRRD CCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH DRRDDRRDDRREWRQDRRYYSNGYRDGYRDARYQDRRYDRNRVYVYDLPGYYRPGPPPRP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCC YWARGQRYHGPVYVVNDYDRYDLRRPPYGYRWQRDDRGNLLLVAIATGIIADLVINN CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA