| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is kdpA [H]
Identifier: 84625281
GI number: 84625281
Start: 4101226
End: 4102956
Strand: Reverse
Name: kdpA [H]
Synonym: XOO_3624
Alternate gene names: 84625281
Gene position: 4102956-4101226 (Counterclockwise)
Preceding gene: 84625282
Following gene: 84625280
Centisome position: 83.05
GC content: 64.01
Gene sequence:
>1731_bases ATGGCCGCCGTGATGCGCGGCGCACCGATGCGCGGCGACGCGCTGTTCGGCTGGATCGAACGGCCGTTGTACGCGTTGCT CGGAACCCATCCGCAGCAGGGCATGTCGTGGCGGGGCTACGCCAAGGCGTTCTTGCTGAGCAACCTGGTGGTTGGCCTCT TGGTCTGGCTGGTGTTCATGACCCAGGCCTGGCTGCCGTTCAATCCCGACGCCATCCCGAACATGCGCTGGGACACCGCG CTGCACACCGTGGTGTCGTTCGTCACCAACACCAATCAGCAGCATTACTCCGGCCAGGCGCAGTTGTCGTATCTGTCGCA GATGACCGGCATCGTCGGCCTGCAGGTGGTGACGCCGATGATGGGCCTGGCGTTGGCAGTGGCGACACTGCGTGCGTTGT TCGGTGGGCGCGCCGCCAAACAGGCGTCGGTTGCTGCACCGGCATCGGACACGACGGCCGTGGCGGCGATTTCGGAGCCG GAACTGTCGCGTCAGGGACGCCAGCACACGGGGTCCGGCTTGGAAGCCCTGCCTGAAGCAGATGTCGGCAATTACTGGGC TGACGTGATCCGCTCCAGCGTGCGCGTGCTGCTGCCACTGTGCCTGCTGTTGACCGTTCTACTCGGCTGGCAGGGTGTGC CGTCGACCTTCCAGGGCGCGGCGACCGCTGTACCGTTGGATAGCAGTGCCGGCATAGCCAAGCAGACCATCCCAGTGGGC CCGGTTGCCGCGATGGTGGCGGTGAAACAGCTCGGCACCGACGGCGGTGGCTGGTATGGCCCCAATAGCTCGGTCGCGCT GGAAAACCCCACGCCGCTGAGCAATTTTCTGGAAACCTTGGCCATCGTGTTACTGCCGATGAGCGTGGTGTTCATGGTCG GCTATCTGACCGGACGCAAGCGACTCACTGCGTTGGTATTCGGCACCATGCTGACGATGTCGGCCGCGTCCACCGCGTTG TTGCTGTGGTCCGAAGCGCATTCGGCCAGTGCGACCTCGCCGGCGCTGATGGAAGGTAAGGAAGTGCGCATCGGTGCGGA TGCCTCTGCGTTGTGGGCGGCGTTGACCACGCAGACCTCCAATGGTTCGGTCAACGCGATGCACGATTCGTTGGCGCCGT TGAGCGGCCTGGTCACGTTGGTCGACATGCTGATCAACGCGATCTGGGGTGGCATTGGTTGCGGCCTGCAGCAGTTCGTG GTGTATCTGTTGCTGAGCGTGTTCCTGGCCGGCTTGATGACCGGACGCACGCCGGAGTTGTTCGGCCGCAAGATCGAATC GCGCGAAGTGCAATTGCTGGCGCTGTTGATCCTGCTGCAGCCGCTGGTGGTGCTGGGCTTTACCGCAGTGACACTGGCCG TGCCGGCAATCACTGCCAATTCCAACCCCGGCTTCCACGGCATCAGCCAGGTGTTCTACGAGTACACCTCCGCGTTCTCC AATAACGGCTCGGGTTTCGAAGGGTTGGGCGATGCCACGTACTGGTGGAATCTGAGCTGCTCGTTGGTGCTGGCGCTGGG ACGGTATCCGGCGTTGGTGCTGCCGTTGATGGTGGCTGCGCGCATGGCGGTGAAGCGCCGTGCGCCGGAGTCGGCCGGCA GCCTGCAAGTCGAAACGCCCACCTTTGCGCTGACCCTGATGGCGATCGTGCTGGTGCTGACCGTGCTGCAGTTCATGCCG GCACTGGTGCTGGGTCCTATCGCTGAACACCTCGCCCTGGCGGCGTCCTGA
Upstream 100 bases:
>100_bases CTGCGGCCCGAAGACTTCTGATCCGAGTGCGCTCCAATGACTGAAACTTTTCTTGTCTACGCGCTGGCCATCGTGCTGGC GTGGCCCCTGGGGCCGTTAC
Downstream 100 bases:
>100_bases GAGTTTTGAGCAATGTCTACGATCGATACGACTGAAAAACGCGAGCGCGGTGACGCAGCGTTGTTCGATGCCGCCGTACT GGTTGCGGCGATGCGTGCTG
Product: potassium-transporting ATPase subunit A
Products: NA
Alternate protein names: ATP phosphohydrolase [potassium-transporting] A chain; Potassium-binding and translocating subunit A; Potassium-translocating ATPase A chain [H]
Number of amino acids: Translated: 576; Mature: 575
Protein sequence:
>576_residues MAAVMRGAPMRGDALFGWIERPLYALLGTHPQQGMSWRGYAKAFLLSNLVVGLLVWLVFMTQAWLPFNPDAIPNMRWDTA LHTVVSFVTNTNQQHYSGQAQLSYLSQMTGIVGLQVVTPMMGLALAVATLRALFGGRAAKQASVAAPASDTTAVAAISEP ELSRQGRQHTGSGLEALPEADVGNYWADVIRSSVRVLLPLCLLLTVLLGWQGVPSTFQGAATAVPLDSSAGIAKQTIPVG PVAAMVAVKQLGTDGGGWYGPNSSVALENPTPLSNFLETLAIVLLPMSVVFMVGYLTGRKRLTALVFGTMLTMSAASTAL LLWSEAHSASATSPALMEGKEVRIGADASALWAALTTQTSNGSVNAMHDSLAPLSGLVTLVDMLINAIWGGIGCGLQQFV VYLLLSVFLAGLMTGRTPELFGRKIESREVQLLALLILLQPLVVLGFTAVTLAVPAITANSNPGFHGISQVFYEYTSAFS NNGSGFEGLGDATYWWNLSCSLVLALGRYPALVLPLMVAARMAVKRRAPESAGSLQVETPTFALTLMAIVLVLTVLQFMP ALVLGPIAEHLALAAS
Sequences:
>Translated_576_residues MAAVMRGAPMRGDALFGWIERPLYALLGTHPQQGMSWRGYAKAFLLSNLVVGLLVWLVFMTQAWLPFNPDAIPNMRWDTA LHTVVSFVTNTNQQHYSGQAQLSYLSQMTGIVGLQVVTPMMGLALAVATLRALFGGRAAKQASVAAPASDTTAVAAISEP ELSRQGRQHTGSGLEALPEADVGNYWADVIRSSVRVLLPLCLLLTVLLGWQGVPSTFQGAATAVPLDSSAGIAKQTIPVG PVAAMVAVKQLGTDGGGWYGPNSSVALENPTPLSNFLETLAIVLLPMSVVFMVGYLTGRKRLTALVFGTMLTMSAASTAL LLWSEAHSASATSPALMEGKEVRIGADASALWAALTTQTSNGSVNAMHDSLAPLSGLVTLVDMLINAIWGGIGCGLQQFV VYLLLSVFLAGLMTGRTPELFGRKIESREVQLLALLILLQPLVVLGFTAVTLAVPAITANSNPGFHGISQVFYEYTSAFS NNGSGFEGLGDATYWWNLSCSLVLALGRYPALVLPLMVAARMAVKRRAPESAGSLQVETPTFALTLMAIVLVLTVLQFMP ALVLGPIAEHLALAAS >Mature_575_residues AAVMRGAPMRGDALFGWIERPLYALLGTHPQQGMSWRGYAKAFLLSNLVVGLLVWLVFMTQAWLPFNPDAIPNMRWDTAL HTVVSFVTNTNQQHYSGQAQLSYLSQMTGIVGLQVVTPMMGLALAVATLRALFGGRAAKQASVAAPASDTTAVAAISEPE LSRQGRQHTGSGLEALPEADVGNYWADVIRSSVRVLLPLCLLLTVLLGWQGVPSTFQGAATAVPLDSSAGIAKQTIPVGP VAAMVAVKQLGTDGGGWYGPNSSVALENPTPLSNFLETLAIVLLPMSVVFMVGYLTGRKRLTALVFGTMLTMSAASTALL LWSEAHSASATSPALMEGKEVRIGADASALWAALTTQTSNGSVNAMHDSLAPLSGLVTLVDMLINAIWGGIGCGLQQFVV YLLLSVFLAGLMTGRTPELFGRKIESREVQLLALLILLQPLVVLGFTAVTLAVPAITANSNPGFHGISQVFYEYTSAFSN NGSGFEGLGDATYWWNLSCSLVLALGRYPALVLPLMVAARMAVKRRAPESAGSLQVETPTFALTLMAIVLVLTVLQFMPA LVLGPIAEHLALAAS
Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions [H]
COG id: COG2060
COG function: function code P; K+-transporting ATPase, A chain
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kdpA family [H]
Homologues:
Organism=Escherichia coli, GI1786915, Length=564, Percent_Identity=35.6382978723404, Blast_Score=325, Evalue=5e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004623 [H]
Pfam domain/function: PF03814 KdpA [H]
EC number: =3.6.3.12 [H]
Molecular weight: Translated: 60835; Mature: 60704
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVMRGAPMRGDALFGWIERPLYALLGTHPQQGMSWRGYAKAFLLSNLVVGLLVWLVFM CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TQAWLPFNPDAIPNMRWDTALHTVVSFVTNTNQQHYSGQAQLSYLSQMTGIVGLQVVTPM HHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH MGLALAVATLRALFGGRAAKQASVAAPASDTTAVAAISEPELSRQGRQHTGSGLEALPEA HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCHHCCCC DVGNYWADVIRSSVRVLLPLCLLLTVLLGWQGVPSTFQGAATAVPLDSSAGIAKQTIPVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEECCCCCCCCCCCCCCCCC PVAAMVAVKQLGTDGGGWYGPNSSVALENPTPLSNFLETLAIVLLPMSVVFMVGYLTGRK HHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLTALVFGTMLTMSAASTALLLWSEAHSASATSPALMEGKEVRIGADASALWAALTTQTS HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHCCCEEEECCCHHHHHHHHHCCCC NGSVNAMHDSLAPLSGLVTLVDMLINAIWGGIGCGLQQFVVYLLLSVFLAGLMTGRTPEL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHH FGRKIESREVQLLALLILLQPLVVLGFTAVTLAVPAITANSNPGFHGISQVFYEYTSAFS HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHC NNGSGFEGLGDATYWWNLSCSLVLALGRYPALVLPLMVAARMAVKRRAPESAGSLQVETP CCCCCCCCCCCCCEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCH TFALTLMAIVLVLTVLQFMPALVLGPIAEHLALAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AAVMRGAPMRGDALFGWIERPLYALLGTHPQQGMSWRGYAKAFLLSNLVVGLLVWLVFM CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TQAWLPFNPDAIPNMRWDTALHTVVSFVTNTNQQHYSGQAQLSYLSQMTGIVGLQVVTPM HHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH MGLALAVATLRALFGGRAAKQASVAAPASDTTAVAAISEPELSRQGRQHTGSGLEALPEA HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCHHCCCC DVGNYWADVIRSSVRVLLPLCLLLTVLLGWQGVPSTFQGAATAVPLDSSAGIAKQTIPVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEECCCCCCCCCCCCCCCCC PVAAMVAVKQLGTDGGGWYGPNSSVALENPTPLSNFLETLAIVLLPMSVVFMVGYLTGRK HHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLTALVFGTMLTMSAASTALLLWSEAHSASATSPALMEGKEVRIGADASALWAALTTQTS HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHCCCEEEECCCHHHHHHHHHCCCC NGSVNAMHDSLAPLSGLVTLVDMLINAIWGGIGCGLQQFVVYLLLSVFLAGLMTGRTPEL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHH FGRKIESREVQLLALLILLQPLVVLGFTAVTLAVPAITANSNPGFHGISQVFYEYTSAFS HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHC NNGSGFEGLGDATYWWNLSCSLVLALGRYPALVLPLMVAARMAVKRRAPESAGSLQVETP CCCCCCCCCCCCCEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCH TFALTLMAIVLVLTVLQFMPALVLGPIAEHLALAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA