Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625245
Identifier: 84625245
GI number: 84625245
Start: 4058265
End: 4058852
Strand: Reverse
Name: 84625245
Synonym: XOO_3588
Alternate gene names: NA
Gene position: 4058852-4058265 (Counterclockwise)
Preceding gene: 84625246
Following gene: 84625243
Centisome position: 82.16
GC content: 65.14
Gene sequence:
>588_bases ATGACGCGCTCTTTCTGCCAGGCCGTACTTGCCTCCGCCATCGCGTTGGGCTTGGCCGGGGCCACCGAACTGTTGACCCA GGTCGGCAAACCCGGCAGCTACGCCTCCGAGCGCGTCTGGAACGCCGGTGTCGGCCGTCAGCTCAGCCAGGGTGGCGTCA GCAAGATCGCTTACGCGCCACAATGGCAGCGTACCTTGCTGCCTGGGCAGACGGCGTCCGGCTACCGTGCAGTACCCGAT GTCAGCTTCAATGGCGCGTTCTATAGCAGTGCGCAGATTCGCGGCACCGATGCGCAGGGCAACGAGGCTCCGTGGTATGT GTGGGGCACCAGTGCCGCCACCCCGACCTTCGCCGGCTATATCGCCCGGCTGTTGCAGTCGCATCCCGATCTGGGCTTCG TCGCGCCGCAGATCTATCAGTACGCGAGCCAGCGCAACGACGCGCAGCGCGCCCATGACGTCGTGGTGGGCACCAACGGT CTCTATCGCGATGGCTATAACGCCAGCTTGGGCTGGGACTTCGCGTCGGGTTGGGGCAGCATGAACATCGGCGACTTCGA CCGCTTCCTGACGCAGGCATCGCCATGA
Upstream 100 bases:
>100_bases TTGCCAAGCACCCGCTTCGCATTGTTGTGCCTGAAACTTATACCGCCTCGTGAAGACTCCGCAGCCTCTTCACTCACACC AACCGGCGGTAAACGAAATG
Downstream 100 bases:
>100_bases GTGTCAATGCGCATGGCGAGCTCGCTGTCGCTGCGGCCTAAGACACTGACATTCCAACGTTGCGTAGCGGCGGTGCTGGT TACCGAGGCGGCGAGCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Pseudomonalisin; Protease Protein; Curculin Domain-Containing Protein; Sedolisin
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTRSFCQAVLASAIALGLAGATELLTQVGKPGSYASERVWNAGVGRQLSQGGVSKIAYAPQWQRTLLPGQTASGYRAVPD VSFNGAFYSSAQIRGTDAQGNEAPWYVWGTSAATPTFAGYIARLLQSHPDLGFVAPQIYQYASQRNDAQRAHDVVVGTNG LYRDGYNASLGWDFASGWGSMNIGDFDRFLTQASP
Sequences:
>Translated_195_residues MTRSFCQAVLASAIALGLAGATELLTQVGKPGSYASERVWNAGVGRQLSQGGVSKIAYAPQWQRTLLPGQTASGYRAVPD VSFNGAFYSSAQIRGTDAQGNEAPWYVWGTSAATPTFAGYIARLLQSHPDLGFVAPQIYQYASQRNDAQRAHDVVVGTNG LYRDGYNASLGWDFASGWGSMNIGDFDRFLTQASP >Mature_194_residues TRSFCQAVLASAIALGLAGATELLTQVGKPGSYASERVWNAGVGRQLSQGGVSKIAYAPQWQRTLLPGQTASGYRAVPDV SFNGAFYSSAQIRGTDAQGNEAPWYVWGTSAATPTFAGYIARLLQSHPDLGFVAPQIYQYASQRNDAQRAHDVVVGTNGL YRDGYNASLGWDFASGWGSMNIGDFDRFLTQASP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20853; Mature: 20722
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSFCQAVLASAIALGLAGATELLTQVGKPGSYASERVWNAGVGRQLSQGGVSKIAYAP CCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHCCCHHEEECC QWQRTLLPGQTASGYRAVPDVSFNGAFYSSAQIRGTDAQGNEAPWYVWGTSAATPTFAGY CHHHHCCCCCCCCCCCCCCCCCCCCCEECCCEEECCCCCCCCCCEEEEECCCCCHHHHHH IARLLQSHPDLGFVAPQIYQYASQRNDAQRAHDVVVGTNGLYRDGYNASLGWDFASGWGS HHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHEEEECCCCCEECCCCCCCCCHHHCCCCC MNIGDFDRFLTQASP CCCCHHHHHHHCCCC >Mature Secondary Structure TRSFCQAVLASAIALGLAGATELLTQVGKPGSYASERVWNAGVGRQLSQGGVSKIAYAP CHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHCCCHHEEECC QWQRTLLPGQTASGYRAVPDVSFNGAFYSSAQIRGTDAQGNEAPWYVWGTSAATPTFAGY CHHHHCCCCCCCCCCCCCCCCCCCCCEECCCEEECCCCCCCCCCEEEEECCCCCHHHHHH IARLLQSHPDLGFVAPQIYQYASQRNDAQRAHDVVVGTNGLYRDGYNASLGWDFASGWGS HHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHEEEECCCCCEECCCCCCCCCHHHCCCCC MNIGDFDRFLTQASP CCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA