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The map label for this gene is qseC [H]

Identifier: 84622661

GI number: 84622661

Start: 1097575

End: 1098960

Strand: Direct

Name: qseC [H]

Synonym: XOO_1004

Alternate gene names: 84622661

Gene position: 1097575-1098960 (Clockwise)

Preceding gene: 84622660

Following gene: 84622662

Centisome position: 22.22

GC content: 65.44

Gene sequence:

>1386_bases
ATGGCTGAGCCGCTGACGGTGGCACCGTCGATCCGGCGCACCTTGCTGCTGTATCTAGGCAGCTTGTCGCTGCTGGGTGC
GGTGGTGCTGTTCTTTGCCGCCCGCAACTACGGCGAGCGCGCGGCCAATCGGTCCTACGATCATCTGCTGGTGTCCTCGG
CCTTGTCGATCATCGACAGCGTGGCGTTGGTCGGCGGCGATTGGCAGGTGGATTTGCCATATGCCTCGCTGGATCTGCTG
GGCATGGCACCGGAAGACCGCGTGTTCTATCGCGTGTTCGATGCGCAGGGCCGCACCATCACCGGCGAAGACACGCTGCC
GCTGCCGCCAAGCTCGCCGCGCGACGAGCGGCCGCTGTTGTTCGATGCGCAATACAGCGGTGAGCCGGTGCGCTTTGCGG
TGGTGATGCATCGGGTGGCATCGGCATCGGAGCAAGACGAGGTGCGCGTGCAGGTGGGCCAGACCCGCCGCGTACGCGAT
GCCGTGGCGCGCGACGTGGTGCTCAACGCGTTAGTGGCGATCGGGGTACTGTCGCTGCTGGCGCTGGCCCTGGTGTGGCT
GGGTGTGTACCGCGCGTTGCGGCCATTGCAGCGCATCGAACGCGATCTGTCGCGGCGCGAACCCTCCGACCTCAAACCGC
TTAATGTGCCGGCACCGCAGGAAATGCAGTTGATGGTGACTGCGCTCAACAGCTTCATGGCGCGGCTATCGTCCAGTAAT
GAAACCCTGCGCGCGTTCATGGCCGAGGCCGCGCACCAGATGCGTACGCCCTTGGCGGCCCTGCGTGCGCAGGCGCAGCT
GGCGATGGACGATGACGACCCGCGCGAGATGCAACGCAGCCTGGTTGCGATCGAGCGCAACGCCAGCCACATGAGCCGGC
TGCTCAATCAGTTGCTCAGCGATGCCAGCGTGACCCATCGCTCCAACCTGCAGCGCTTTGCCACCGTGGATCTGGCAGAA
CTACTGCATCAGGCCTTGCGCGAAGCACTGCCGCGGAGCGAAGGCGCACCGCGCGTGCACCTGGCGATCGACCCGCAGCC
GGCGCTGCTACGTGGCGATGCCTTGCTGCTGCGCGAAGCGCTGAAAAACCTGATCGACAATGCATGCAAATACGGCGCCG
TTGCACCGCTACAAGTGGCGCTCACCAGCGACGGCAACCATCACGTGCTGACCATCGCCGATCACGGCCCAGGGATTCCG
GCTGCCGAAGCCGAGCGCGTGTTCGAGCGTTTCGTCCGTGGGCAGGATGCGCCGGCCGGCGGTGCCGGACTGGGGCTGGC
CATCGTCAAACGTGTGGTGGAAGCACATGGCGGGCGTATCGATCTGGCCAACCGTATCGGCGGCGGCTTGATCGCGTCGC
TGCATTTTCCTGGAGGACCTGCGTGA

Upstream 100 bases:

>100_bases
CGCAAGCTGGCCGCAGCGCCGCTGCGTATCGTCACCGTGCGCGGTGCGGGCTACAAACTGGAAGAAGCCGACCCGCATGC
GCCGGTGGAGCCGGGCGCCG

Downstream 100 bases:

>100_bases
TGCGGCTGATGTGGATGTTGGTCGTGCTGCTGATCCATGGCATCGCTTACGCAGAGCCCGGCCAGGTGCGCCGCTTTCCT
GCACAGGGTCGCGTGCATGT

Product: two-component system sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MAEPLTVAPSIRRTLLLYLGSLSLLGAVVLFFAARNYGERAANRSYDHLLVSSALSIIDSVALVGGDWQVDLPYASLDLL
GMAPEDRVFYRVFDAQGRTITGEDTLPLPPSSPRDERPLLFDAQYSGEPVRFAVVMHRVASASEQDEVRVQVGQTRRVRD
AVARDVVLNALVAIGVLSLLALALVWLGVYRALRPLQRIERDLSRREPSDLKPLNVPAPQEMQLMVTALNSFMARLSSSN
ETLRAFMAEAAHQMRTPLAALRAQAQLAMDDDDPREMQRSLVAIERNASHMSRLLNQLLSDASVTHRSNLQRFATVDLAE
LLHQALREALPRSEGAPRVHLAIDPQPALLRGDALLLREALKNLIDNACKYGAVAPLQVALTSDGNHHVLTIADHGPGIP
AAEAERVFERFVRGQDAPAGGAGLGLAIVKRVVEAHGGRIDLANRIGGGLIASLHFPGGPA

Sequences:

>Translated_461_residues
MAEPLTVAPSIRRTLLLYLGSLSLLGAVVLFFAARNYGERAANRSYDHLLVSSALSIIDSVALVGGDWQVDLPYASLDLL
GMAPEDRVFYRVFDAQGRTITGEDTLPLPPSSPRDERPLLFDAQYSGEPVRFAVVMHRVASASEQDEVRVQVGQTRRVRD
AVARDVVLNALVAIGVLSLLALALVWLGVYRALRPLQRIERDLSRREPSDLKPLNVPAPQEMQLMVTALNSFMARLSSSN
ETLRAFMAEAAHQMRTPLAALRAQAQLAMDDDDPREMQRSLVAIERNASHMSRLLNQLLSDASVTHRSNLQRFATVDLAE
LLHQALREALPRSEGAPRVHLAIDPQPALLRGDALLLREALKNLIDNACKYGAVAPLQVALTSDGNHHVLTIADHGPGIP
AAEAERVFERFVRGQDAPAGGAGLGLAIVKRVVEAHGGRIDLANRIGGGLIASLHFPGGPA
>Mature_460_residues
AEPLTVAPSIRRTLLLYLGSLSLLGAVVLFFAARNYGERAANRSYDHLLVSSALSIIDSVALVGGDWQVDLPYASLDLLG
MAPEDRVFYRVFDAQGRTITGEDTLPLPPSSPRDERPLLFDAQYSGEPVRFAVVMHRVASASEQDEVRVQVGQTRRVRDA
VARDVVLNALVAIGVLSLLALALVWLGVYRALRPLQRIERDLSRREPSDLKPLNVPAPQEMQLMVTALNSFMARLSSSNE
TLRAFMAEAAHQMRTPLAALRAQAQLAMDDDDPREMQRSLVAIERNASHMSRLLNQLLSDASVTHRSNLQRFATVDLAEL
LHQALREALPRSEGAPRVHLAIDPQPALLRGDALLLREALKNLIDNACKYGAVAPLQVALTSDGNHHVLTIADHGPGIPA
AEAERVFERFVRGQDAPAGGAGLGLAIVKRVVEAHGGRIDLANRIGGGLIASLHFPGGPA

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC. May activate qseB by phosphorylation [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=388, Percent_Identity=30.6701030927835, Blast_Score=141, Evalue=9e-35,
Organism=Escherichia coli, GI1790551, Length=305, Percent_Identity=30.8196721311475, Blast_Score=108, Evalue=9e-25,
Organism=Escherichia coli, GI1786912, Length=292, Percent_Identity=30.8219178082192, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1786783, Length=288, Percent_Identity=27.0833333333333, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1790861, Length=303, Percent_Identity=26.7326732673267, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787374, Length=293, Percent_Identity=26.2798634812287, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1788393, Length=273, Percent_Identity=27.4725274725275, Blast_Score=92, Evalue=9e-20,
Organism=Escherichia coli, GI1788279, Length=279, Percent_Identity=28.3154121863799, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1790346, Length=245, Percent_Identity=26.9387755102041, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1786600, Length=263, Percent_Identity=29.6577946768061, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787894, Length=211, Percent_Identity=31.2796208530806, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI1789808, Length=277, Percent_Identity=25.9927797833935, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI145693157, Length=219, Percent_Identity=24.6575342465753, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI48994928, Length=241, Percent_Identity=24.896265560166, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87081816, Length=332, Percent_Identity=27.1084337349398, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87082128, Length=297, Percent_Identity=25.9259259259259, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1788549, Length=227, Percent_Identity=27.7533039647577, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1790436, Length=214, Percent_Identity=26.6355140186916, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789149, Length=249, Percent_Identity=24.0963855421687, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 50047; Mature: 49916

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPLTVAPSIRRTLLLYLGSLSLLGAVVLFFAARNYGERAANRSYDHLLVSSALSIIDS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VALVGGDWQVDLPYASLDLLGMAPEDRVFYRVFDAQGRTITGEDTLPLPPSSPRDERPLL
HHHCCCCEEEECCCHHHHHCCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCEE
FDAQYSGEPVRFAVVMHRVASASEQDEVRVQVGQTRRVRDAVARDVVLNALVAIGVLSLL
EECCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALALVWLGVYRALRPLQRIERDLSRREPSDLKPLNVPAPQEMQLMVTALNSFMARLSSSN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCH
ETLRAFMAEAAHQMRTPLAALRAQAQLAMDDDDPREMQRSLVAIERNASHMSRLLNQLLS
HHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
DASVTHRSNLQRFATVDLAELLHQALREALPRSEGAPRVHLAIDPQPALLRGDALLLREA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHCCHHHHHHHH
LKNLIDNACKYGAVAPLQVALTSDGNHHVLTIADHGPGIPAAEAERVFERFVRGQDAPAG
HHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCC
GAGLGLAIVKRVVEAHGGRIDLANRIGGGLIASLHFPGGPA
CCHHHHHHHHHHHHHCCCEEEEHHHCCCCEEEEEECCCCCC
>Mature Secondary Structure 
AEPLTVAPSIRRTLLLYLGSLSLLGAVVLFFAARNYGERAANRSYDHLLVSSALSIIDS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VALVGGDWQVDLPYASLDLLGMAPEDRVFYRVFDAQGRTITGEDTLPLPPSSPRDERPLL
HHHCCCCEEEECCCHHHHHCCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCEE
FDAQYSGEPVRFAVVMHRVASASEQDEVRVQVGQTRRVRDAVARDVVLNALVAIGVLSLL
EECCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALALVWLGVYRALRPLQRIERDLSRREPSDLKPLNVPAPQEMQLMVTALNSFMARLSSSN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCH
ETLRAFMAEAAHQMRTPLAALRAQAQLAMDDDDPREMQRSLVAIERNASHMSRLLNQLLS
HHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
DASVTHRSNLQRFATVDLAELLHQALREALPRSEGAPRVHLAIDPQPALLRGDALLLREA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHCCHHHHHHHH
LKNLIDNACKYGAVAPLQVALTSDGNHHVLTIADHGPGIPAAEAERVFERFVRGQDAPAG
HHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCC
GAGLGLAIVKRVVEAHGGRIDLANRIGGGLIASLHFPGGPA
CCHHHHHHHHHHHHHCCCEEEEHHHCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796; 11929534 [H]