Click here to switch to the map view.

The map label for this gene is rsgA [H]

Identifier: 84622650

GI number: 84622650

Start: 1082162

End: 1083253

Strand: Direct

Name: rsgA [H]

Synonym: XOO_0993

Alternate gene names: 84622650

Gene position: 1082162-1083253 (Clockwise)

Preceding gene: 84622646

Following gene: 84622651

Centisome position: 21.91

GC content: 67.22

Gene sequence:

>1092_bases
ATGAGCGACATCTCCCCCGATTACCCCACCCTCCAATCCATCGGCTGGCCCTGGCCGGGGCCGCCTGAAGAGGCGGCCTG
GAAGGCAGTCTTCGCCGCGCATCCGCAGGCGCTGCCGGCGCGGGTGGTGGAGCAGCACCGCACCGGCTATGTGGTGGCCG
ATACGCCGGAGGCCAGCCTCAAGGCCGAGTCGTTGCCGGAGTGGCAGCGGCCGCGCTTCCCCAGCCATGAGCGGGCGGCG
GTGGGCGATTGGGTGTTGATGGAGGGCAAGCGCATCGTGGCGCTGCTGCCGCGGCGCACTTCGATCAAGCGGGGGGCGGC
CGGCGCGCATTACCACCAGCAGGTGATCGCGGCCAATATCGATACGGTGTTCATCGTGTGCGGGCTGGATGCGGACTTCA
ATCCGCGTCGCATCGAGCGCTATCTGTTGCTGGTGGGCGGCGGCGGTGCGCAGCCGGTGGTGGTGCTGACCAAGGCCGAT
CAGACCGAACATGCCGAGGATGCGTTGGCGGTGCTGGAAGAGCTGGAGGCGCAGAACATTCCGTTGCGCGCGGTCAATGC
CAAGGATCCGGCCAGCGTGGCTGCGCTGCGGCCGTGGCTGGGCGATGGCCGTACGGCGGTATTGGTGGGCTCGTCCGGTG
CGGGCAAATCGACCTTGACCAACACCCTGTTGGGCACCGAGAAGATGAAGACCAATGGGGTGCGCGAAAACGATTCGCGC
GGCCGTCACACCACCACGCACCGCGCGTTGATTCCGTTGCCGTCCGGTGCGTGTCTGATCGACACGCCCGGCATGCGCGA
GCTCAAGCCGACCGGCGAAGAGGATCTGGCCGAAGGCGGTTTTTCGGATGTGGAGGCGTTGGCGGCGCAGTGCCGCTTCA
ACGATTGCGCGCATATCGCCGAGCCAGGCTGTGCGGTGCGCGCGGCAATCGAGGCCGACTTGCTGGATCCGGAGCGGGTG
GCCAATTACATGAAGCTGCGGGTGGAAGTGGCCAGCGCTGCCGAAAAGCTCGCCACCCGCGTTGCGCAGAACAATCGCGG
CAAAGGGTCGGGCAAGCGGCCGGCCAGTATCGATCGTCCCGGACGGCGCTGA

Upstream 100 bases:

>100_bases
GCGGACATGCTTGCATCGGCAACGATGTCAAGTGGCGCGTGAGCCGCCCGGCAGGACCCGATTGCACAAGCCGCTGCGGC
CAGCCAGCTAGAATCGCCCC

Downstream 100 bases:

>100_bases
TGCCATCGCGCAAGGGGCCGCCAGACATCGTCCGTCACGCGGCGCTGGATGCGCGCTTGGTCAAGGCCGTGCGCGGTGTG
CGCCTGCTGGCCTTGGCGAG

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MSDISPDYPTLQSIGWPWPGPPEEAAWKAVFAAHPQALPARVVEQHRTGYVVADTPEASLKAESLPEWQRPRFPSHERAA
VGDWVLMEGKRIVALLPRRTSIKRGAAGAHYHQQVIAANIDTVFIVCGLDADFNPRRIERYLLLVGGGGAQPVVVLTKAD
QTEHAEDALAVLEELEAQNIPLRAVNAKDPASVAALRPWLGDGRTAVLVGSSGAGKSTLTNTLLGTEKMKTNGVRENDSR
GRHTTTHRALIPLPSGACLIDTPGMRELKPTGEEDLAEGGFSDVEALAAQCRFNDCAHIAEPGCAVRAAIEADLLDPERV
ANYMKLRVEVASAAEKLATRVAQNNRGKGSGKRPASIDRPGRR

Sequences:

>Translated_363_residues
MSDISPDYPTLQSIGWPWPGPPEEAAWKAVFAAHPQALPARVVEQHRTGYVVADTPEASLKAESLPEWQRPRFPSHERAA
VGDWVLMEGKRIVALLPRRTSIKRGAAGAHYHQQVIAANIDTVFIVCGLDADFNPRRIERYLLLVGGGGAQPVVVLTKAD
QTEHAEDALAVLEELEAQNIPLRAVNAKDPASVAALRPWLGDGRTAVLVGSSGAGKSTLTNTLLGTEKMKTNGVRENDSR
GRHTTTHRALIPLPSGACLIDTPGMRELKPTGEEDLAEGGFSDVEALAAQCRFNDCAHIAEPGCAVRAAIEADLLDPERV
ANYMKLRVEVASAAEKLATRVAQNNRGKGSGKRPASIDRPGRR
>Mature_362_residues
SDISPDYPTLQSIGWPWPGPPEEAAWKAVFAAHPQALPARVVEQHRTGYVVADTPEASLKAESLPEWQRPRFPSHERAAV
GDWVLMEGKRIVALLPRRTSIKRGAAGAHYHQQVIAANIDTVFIVCGLDADFNPRRIERYLLLVGGGGAQPVVVLTKADQ
TEHAEDALAVLEELEAQNIPLRAVNAKDPASVAALRPWLGDGRTAVLVGSSGAGKSTLTNTLLGTEKMKTNGVRENDSRG
RHTTTHRALIPLPSGACLIDTPGMRELKPTGEEDLAEGGFSDVEALAAQCRFNDCAHIAEPGCAVRAAIEADLLDPERVA
NYMKLRVEVASAAEKLATRVAQNNRGKGSGKRPASIDRPGRR

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=220, Percent_Identity=34.5454545454545, Blast_Score=115, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 39074; Mature: 38942

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDISPDYPTLQSIGWPWPGPPEEAAWKAVFAAHPQALPARVVEQHRTGYVVADTPEASL
CCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCCC
KAESLPEWQRPRFPSHERAAVGDWVLMEGKRIVALLPRRTSIKRGAAGAHYHQQVIAANI
CHHCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCC
DTVFIVCGLDADFNPRRIERYLLLVGGGGAQPVVVLTKADQTEHAEDALAVLEELEAQNI
CEEEEEEECCCCCCHHEEEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC
PLRAVNAKDPASVAALRPWLGDGRTAVLVGSSGAGKSTLTNTLLGTEKMKTNGVRENDSR
CEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCHHHHHCCCCCCCCC
GRHTTTHRALIPLPSGACLIDTPGMRELKPTGEEDLAEGGFSDVEALAAQCRFNDCAHIA
CCCCCCCEEEEECCCCCEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCHHHC
EPGCAVRAAIEADLLDPERVANYMKLRVEVASAAEKLATRVAQNNRGKGSGKRPASIDRP
CCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GRR
CCC
>Mature Secondary Structure 
SDISPDYPTLQSIGWPWPGPPEEAAWKAVFAAHPQALPARVVEQHRTGYVVADTPEASL
CCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCCC
KAESLPEWQRPRFPSHERAAVGDWVLMEGKRIVALLPRRTSIKRGAAGAHYHQQVIAANI
CHHCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCC
DTVFIVCGLDADFNPRRIERYLLLVGGGGAQPVVVLTKADQTEHAEDALAVLEELEAQNI
CEEEEEEECCCCCCHHEEEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC
PLRAVNAKDPASVAALRPWLGDGRTAVLVGSSGAGKSTLTNTLLGTEKMKTNGVRENDSR
CEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCHHHHHCCCCCCCCC
GRHTTTHRALIPLPSGACLIDTPGMRELKPTGEEDLAEGGFSDVEALAAQCRFNDCAHIA
CCCCCCCEEEEECCCCCEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCHHHC
EPGCAVRAAIEADLLDPERVANYMKLRVEVASAAEKLATRVAQNNRGKGSGKRPASIDRP
CCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GRR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]